Eucgr.K02545 (Eucalyptus grandis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Eucgr.K02545 T323461_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.896 0.707
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.K02545.1 SBP 177 251
Eucgr.K02545.2 SBP 177 251

Links

Other SBP family TFs
Other Eucalyptus grandis TFs

108 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla019331 Citrullus lanatus Cla019331 I 0.963
POPTR_0010s16400 Populus trichocarpa POPTR_0010s16400 I 0.963
SapurV1A.0072s0340 Salix purpurea SapurV1A.0072s0340 I 0.963
Cucsa.113410 Cucumis sativus Cucsa.113410 I 0.963
VIT_17s0000g05020 Vitis vinifera VIT_17s0000g05020 I 0.963
GLYMA17G08840 Glycine max GLYMA17G08840 I 0.962
30138.m003942 Ricinus communis 30138.m003942 I 0.962
MTR_2g461920 Medicago truncatula MTR_2g461920 I 0.962
Cucsa.198630 Cucumis sativus Cucsa.198630 I 0.962
TCM_014330 Theobroma cacao TCM_014330 I 0.962
GLYMA04G32002 Glycine max GLYMA04G32002 I 0.962
MTR_4g109770 Medicago truncatula MTR_4g109770 I 0.962
Ca_19449 Cicer arietinum Ca_19449 I 0.962
GLYMA0005S50 Glycine max GLYMA0005S50 I 0.962
30174.m009082 Ricinus communis 30174.m009082 I 0.962
MDP0000778465 Malus domestica MDP0000778465 I 0.962
MDP0000146640 Malus domestica MDP0000146640 I 0.962
POPTR_0008s09750 Populus trichocarpa POPTR_0008s09750 I 0.960
POPTR_0015s07140 Populus trichocarpa POPTR_0015s07140 I 0.960
Cla018827 Citrullus lanatus Cla018827 I 0.960
Lus10021141.g Linum usitatissimum Lus10021141.g I 0.960
evm.TU.supercontig_2783.1 Carica papaya evm.TU.supercontig_2783.1 I 0.959
cassava39122.m1 Manihot esculenta cassava39122.m1 I 0.959
Solyc03g114850.2 Solanum lycopersicum Solyc03g114850.2 I 0.958
VIT_01s0011g00130 Vitis vinifera VIT_01s0011g00130 I 0.958
PGSC0003DMG400024527 Solanum tuberosum PGSC0003DMG400024527 I 0.958
Lus10007984.g Linum usitatissimum Lus10007984.g I 0.958
cassava43385.valid.m1 Manihot esculenta cassava43385.valid.m1 I 0.958
cassava7440.valid.m1 Manihot esculenta cassava7440.valid.m1 I 0.955
AMTR_s00047p00197010 Amborella trichopoda AMTR_s00047p00197010 I 0.953
PK17790.1 Cannabis sativa PK17790.1 I 0.951
Solyc12g038520.1 Solanum lycopersicum Solyc12g038520.1 I 0.950
PGSC0003DMG400023260 Solanum tuberosum PGSC0003DMG400023260 I 0.950
Lus10000643.g Linum usitatissimum Lus10000643.g I 0.948
SapurV1A.0176s0470 Salix purpurea SapurV1A.0176s0470 I 0.948
Gorai.003G102800 Gossypium raimondii Gorai.003G102800 I 0.946
Eucgr.B00631 Eucalyptus grandis Eucgr.B00631 I 0.946
gene26117-v1.0-hybrid Fragaria vesca gene26117-v1.0-hybrid I 0.946
PRUPE_ppa003644mg Prunus persica PRUPE_ppa003644mg I 0.946
Aquca_002_00889 Aquilegia coerulea Aquca_002_00889 I 0.945
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.943
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.943
Lus10036812.g Linum usitatissimum Lus10036812.g I 0.943
MDP0000589558 Malus domestica MDP0000589558 I 0.943
Pm025028 Prunus mume Pm025028 I 0.941
Solyc05g015840.2 Solanum lycopersicum Solyc05g015840.2 I 0.940
PGSC0003DMG400021902 Solanum tuberosum PGSC0003DMG400021902 I 0.940
TCM_011483 Theobroma cacao TCM_011483 I 0.938
Bo3g042890 Brassica oleracea Bo3g042890 I 0.938
Ca_24655 Cicer arietinum Ca_24655 I 0.937
Eucgr.B03518 Eucalyptus grandis Eucgr.B03518 I 0.933
SapurV1A.0329s0040 Salix purpurea SapurV1A.0329s0040 I 0.933
SPL19 Oryza sativa OS11G0496600 I 0.929
LPERR11G11330 Leersia perrieri LPERR11G11330 I 0.929
ORGLA11G0121600 Oryza glaberrima ORGLA11G0121600 I 0.929
orange1.1g008680m.g Citrus sinensis orange1.1g008680m.g I 0.927
Ciclev10019546m.g Citrus clementina Ciclev10019546m.g I 0.927
Cucsa.349620 Cucumis sativus Cucsa.349620 I 0.925
Cla001541 Citrullus lanatus Cla001541 I 0.925
MDP0000193702 Malus domestica MDP0000193702 I 0.919
MDP0000119458 Malus domestica MDP0000119458 I 0.919
Gorai.002G181700 Gossypium raimondii Gorai.002G181700 I 0.914
OMERI11G11920 Oryza meridionalis OMERI11G11920 I 0.913
PK03565.1 Cannabis sativa PK03565.1 I 0.913
MTR_5g046670 Medicago truncatula MTR_5g046670 I 0.913
Gorai.012G185700 Gossypium raimondii Gorai.012G185700 N 0.910
GLYMA01G08056 Glycine max GLYMA01G08056 I 0.909
GLYMA02G13371 Glycine max GLYMA02G13371 I 0.909
GSMUA_Achr9G29330_001 Musa acuminata GSMUA_Achr9G29330_001 I 0.908
GSMUA_Achr6G06030_001 Musa acuminata GSMUA_Achr6G06030_001 I 0.907
GSMUA_Achr2G06150_001 Musa acuminata GSMUA_Achr2G06150_001 I 0.906
Pavir.Ea03909 Panicum virgatum Pavir.Ea03909 I 0.906
Pavir.J02262 Panicum virgatum Pavir.J02262 I 0.906
Si001804m.g Setaria italica Si001804m.g I 0.906
GSMUA_AchrUn_randomG08380_001 Musa acuminata GSMUA_AchrUn_randomG08380_001 I 0.905
Gorai.013G095700 Gossypium raimondii Gorai.013G095700 I 0.905
Aquca_011_00114 Aquilegia coerulea Aquca_011_00114 I 0.904
TCM_008671 Theobroma cacao TCM_008671 I 0.903
Gorai.008G166000 Gossypium raimondii Gorai.008G166000 I 0.903
scaffold_801495.1 Arabidopsis lyrata scaffold_801495.1 I 0.903
AMTR_s00013p00150040 Amborella trichopoda AMTR_s00013p00150040 I 0.899
Bo9g097630 Brassica oleracea Bo9g097630 I 0.899
Thhalv10013892m.g Eutrema salsugineum Thhalv10013892m.g I 0.899
Eucgr.K02708 Eucalyptus grandis Eucgr.K02708 I 0.898
GLYMA06G22545 Glycine max GLYMA06G22545 N 0.897
Carubv10026628m.g Capsella rubella Carubv10026628m.g I 0.896
SPL13A Arabidopsis thaliana AT5G50670 D 0.896
SELMODRAFT_17706 Selaginella moellendorffii SELMODRAFT_17706 I 0.896
Cagra.0117s0007 Capsella grandiflora Cagra.0117s0007 I 0.896
SPL13A Arabidopsis thaliana AT5G50570 I 0.896
Bo3g024180 Brassica oleracea Bo3g024180 I 0.896
SELMODRAFT_28630 Selaginella moellendorffii SELMODRAFT_28630 I 0.896
Gorai.005G164600 Gossypium raimondii Gorai.005G164600 I 0.895
GLYMA08G01450 Glycine max GLYMA08G01450 I 0.895
orange1.1g021420m.g Citrus sinensis orange1.1g021420m.g I 0.894
Bostr.15774s0206 Boechera stricta Bostr.15774s0206 I 0.894
Bra022766 Brassica rapa Bra022766 I 0.893
cassava42933.valid.m1 Manihot esculenta cassava42933.valid.m1 I 0.891
fgenesh1_pg.C_scaffold_2001253 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001253 I 0.891
SPL6 Arabidopsis thaliana AT1G69170 I 0.890
GSMUA_AchrUn_randomG21900_001 Musa acuminata GSMUA_AchrUn_randomG21900_001 I 0.889
PGSC0003DMG400028308 Solanum tuberosum PGSC0003DMG400028308 I 0.888
Solyc05g012040.2 Solanum lycopersicum Solyc05g012040.2 I 0.888
Thhalv10018638m.g Eutrema salsugineum Thhalv10018638m.g I 0.887
OB04G27960 Oryza brachyantha OB04G27960 I 0.887
Carubv10020369m.g Capsella rubella Carubv10020369m.g I 0.887
Cagra.0537s0003 Capsella grandiflora Cagra.0537s0003 I 0.887