Traes_4AL_F18648C49 (Triticum aestivum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Traes_4AL_F18648C49 T005831_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.713 0.755
ERF15
M00718_2.00 		Arabidopsis thaliana
NGSCGSCB
VGSCGSCN		 PBM
Chang et al.(2013)
pTH7336 		0.710 0.816
ERF15
M06604_2.00 		Arabidopsis thaliana
NNNHNNHDBMGCCGCCDY
RHGGCGGCKVHDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF15_colamp_a 		0.710 0.816
ERF15
M06605_2.00 		Arabidopsis thaliana
NNYHDYMGCCGCCRY
RYGGCGGCKRHDRNN		 Dap-seq
OMalley et al.(2016)
ERF15_col 		0.710 0.816
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.707 0.837
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.687 0.776
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.687 0.776
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.687 0.776
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.687 0.776
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.687 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4AL_F18648C49.1 AP2 40 92

Links

Other AP2 family TFs
Other Triticum aestivum TFs

239 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_25471 Aegilops tauschii F775_25471 I 0.769
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.769
POPTR_0005s24470 Populus trichocarpa POPTR_0005s24470 I 0.761
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.759
Traes_5BL_FBC7AF288 Triticum aestivum Traes_5BL_FBC7AF288 I 0.759
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.757
Si038911m.g Setaria italica Si038911m.g I 0.751
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.751
Traes_2AL_0B28B6DBE Triticum aestivum Traes_2AL_0B28B6DBE I 0.748
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.744
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.744
29680.m001678 Ricinus communis 29680.m001678 I 0.741
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.741
ORUFI03G43580 Oryza rufipogon ORUFI03G43580 I 0.740
BGIOSGA009392 Oryza indica BGIOSGA009392 I 0.740
OS03G0860100 Oryza sativa OS03G0860100 I 0.740
OGLUM03G41640 Oryza glumaepatula OGLUM03G41640 I 0.740
OBART03G41810 Oryza barthii OBART03G41810 I 0.740
OLONG_002067 Oryza longistaminata OLONG_002067 I 0.740
ORGLA03G0387300 Oryza glaberrima ORGLA03G0387300 I 0.740
ONIVA01G48030 Oryza nivara ONIVA01G48030 I 0.740
OMERI03G15490 Oryza meridionalis OMERI03G15490 I 0.740
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.739
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.738
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.737
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.736
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.735
29584.m000234 Ricinus communis 29584.m000234 I 0.734
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.734
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.734
MDP0000246808 Malus domestica MDP0000246808 I 0.733
TCM_004056 Theobroma cacao TCM_004056 I 0.733
MDP0000447570 Malus domestica MDP0000447570 I 0.733
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.731
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.731
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.730
LPERR03G35710 Leersia perrieri LPERR03G35710 I 0.728
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.725
Gorai.004G220800 Gossypium raimondii Gorai.004G220800 I 0.724
Gorai.007G280900 Gossypium raimondii Gorai.007G280900 I 0.721
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.721
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.721
Gorai.007G280800 Gossypium raimondii Gorai.007G280800 I 0.721
Lus10006579.g Linum usitatissimum Lus10006579.g I 0.720
Thhalv10008518m.g Eutrema salsugineum Thhalv10008518m.g I 0.718
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.715
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.715
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.715
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.714
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.714
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.713
ERF094 Arabidopsis thaliana AT1G06160 D 0.713
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.713
MDP0000855671 Malus domestica MDP0000855671 I 0.713
Solyc09g066360.1 Solanum lycopersicum Solyc09g066360.1 I 0.712
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.712
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.712
mgf023600m Mimulus guttatus mgf023600m I 0.712
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.712
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.712
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.711
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.711
PGSC0003DMG400010285 Solanum tuberosum PGSC0003DMG400010285 I 0.711
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.710
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.710
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.710
Bo4g052480 Brassica oleracea Bo4g052480 I 0.710
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.710
Cagra.6952s0002 Capsella grandiflora Cagra.6952s0002 I 0.710
Bra018271 Brassica rapa Bra018271 I 0.710
TCM_026234 Theobroma cacao TCM_026234 I 0.710
Bostr.24513s0101 Boechera stricta Bostr.24513s0101 I 0.710
ERF15 Arabidopsis thaliana AT2G31230 D 0.710
ATERF15 Arabidopsis lyrata fgenesh2_kg.4__1110__AT2G31230.1 I 0.710
Carubv10025229m.g Capsella rubella Carubv10025229m.g I 0.710
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.709
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.709
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.708
Ca_12081 Cicer arietinum Ca_12081 I 0.708
Bra021712 Brassica rapa Bra021712 I 0.708
mgf018693m Mimulus guttatus mgf018693m I 0.708
Thhalv10017149m.g Eutrema salsugineum Thhalv10017149m.g I 0.708
Bo4g176080 Brassica oleracea Bo4g176080 I 0.708
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.708
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.707
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.707
Bra015478 Brassica rapa Bra015478 I 0.707
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.707
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.706
gene16619-v1.0-hybrid Fragaria vesca gene16619-v1.0-hybrid I 0.705
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.705
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.705
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.705
Lus10014655.g Linum usitatissimum Lus10014655.g I 0.704
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.704
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.704
Cagra.1671s0247 Capsella grandiflora Cagra.1671s0247 I 0.703
Bostr.25219s0341 Boechera stricta Bostr.25219s0341 I 0.703
Carubv10010105m.g Capsella rubella Carubv10010105m.g I 0.703
Solyc09g089930.1 Solanum lycopersicum Solyc09g089930.1 I 0.703
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.703
Bo8g114710 Brassica oleracea Bo8g114710 I 0.703
Bo5g007280 Brassica oleracea Bo5g007280 I 0.703
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.703
Pm020604 Prunus mume Pm020604 I 0.703
Cla021850 Citrullus lanatus Cla021850 I 0.702
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.701
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.701
PGSC0003DMG400017231 Solanum tuberosum PGSC0003DMG400017231 I 0.700
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.700
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.700
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.700
PK23186.1 Cannabis sativa PK23186.1 I 0.700
Bo3g025110 Brassica oleracea Bo3g025110 I 0.699
Bra022832 Brassica rapa Bra022832 I 0.699
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.699
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.699
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.699
TCM_020871 Theobroma cacao TCM_020871 I 0.699
PRUPE_ppa016384mg Prunus persica PRUPE_ppa016384mg I 0.698
Pm003579 Prunus mume Pm003579 I 0.698
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.697
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.697
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.697
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.696
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.696
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.695
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.695
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.695
OS03G0150200 Oryza sativa OS03G0150200 I 0.695
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.695
Cla006080 Citrullus lanatus Cla006080 I 0.695
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.695
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.695
OBART03G03890 Oryza barthii OBART03G03890 I 0.695
SapurV1A.0816s0060 Salix purpurea SapurV1A.0816s0060 I 0.695
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.695
F775_22331 Aegilops tauschii F775_22331 I 0.695
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.695
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.694
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.694
Si028088m.g Setaria italica Si028088m.g I 0.694
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.694
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.693
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.693
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.693
MDP0000235313 Malus domestica MDP0000235313 I 0.692
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.692
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.692
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.692
MDP0000167207 Malus domestica MDP0000167207 I 0.692
MDP0000127134 Malus domestica MDP0000127134 I 0.692
GLYMA13G18340 Glycine max GLYMA13G18340 I 0.692
Pm009382 Prunus mume Pm009382 I 0.692
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.692
Ca_23170 Cicer arietinum Ca_23170 I 0.692
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.692
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.692
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.692
Cla007697 Citrullus lanatus Cla007697 I 0.692
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.692
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.692
TCM_026233 Theobroma cacao TCM_026233 I 0.691
MTR_1g070000 Medicago truncatula MTR_1g070000 I 0.691
MDP0000322279 Malus domestica MDP0000322279 I 0.690
29895.m000321 Ricinus communis 29895.m000321 I 0.690
mgf018935m Mimulus guttatus mgf018935m I 0.690
MTR_1g070020 Medicago truncatula MTR_1g070020 I 0.690
Solyc03g005520.1 Solanum lycopersicum Solyc03g005520.1 I 0.689
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.689
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.689
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.689
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.689
Si031946m.g Setaria italica Si031946m.g I 0.689
PGSC0003DMG400014204 Solanum tuberosum PGSC0003DMG400014204 I 0.689
PGSC0003DMG400013402 Solanum tuberosum PGSC0003DMG400013402 I 0.689
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.689
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.688
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.688
Carubv10014553m.g Capsella rubella Carubv10014553m.g I 0.688
Cagra.8559s0001 Capsella grandiflora Cagra.8559s0001 I 0.688
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.687
Bra023746 Brassica rapa Bra023746 I 0.687
ERF1 Arabidopsis lyrata scaffold_302806.1 I 0.687
F775_22020 Aegilops tauschii F775_22020 I 0.687
Bra023745 Brassica rapa Bra023745 I 0.687
MTR_1g070045 Medicago truncatula MTR_1g070045 I 0.687
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.687
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.687
Bo1g102210 Brassica oleracea Bo1g102210 I 0.687
ERF1B Arabidopsis thaliana AT3G23240 D 0.687
MTR_1g070015 Medicago truncatula MTR_1g070015 I 0.686
OB09G27130 Oryza brachyantha OB09G27130 I 0.686
MTR_1g069985 Medicago truncatula MTR_1g069985 I 0.686
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.686
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.686
ORA59 Arabidopsis lyrata fgenesh2_kg.1__587__AT1G06160.1 I 0.686
TCM_004052 Theobroma cacao TCM_004052 I 0.686
Thhalv10022374m.g Eutrema salsugineum Thhalv10022374m.g I 0.685
chr5.CM0494.320.nc Lotus japonicus chr5.CM0494.320.nc I 0.685
mgf022372m Mimulus guttatus mgf022372m I 0.684
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.684
Si039759m.g Setaria italica Si039759m.g I 0.684
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.684
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.684
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.684
F775_52314 Aegilops tauschii F775_52314 I 0.683
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.683
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.683
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.683
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.683
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.683
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.683
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.683
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.683
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.683
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.683
OBART09G20410 Oryza barthii OBART09G20410 I 0.683
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.683
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.683
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.683
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.683
OS09G0572000 Oryza sativa OS09G0572000 I 0.683
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.682
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.682
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.681
Bostr.19424s0319 Boechera stricta Bostr.19424s0319 I 0.681
Cla015066 Citrullus lanatus Cla015066 I 0.680
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.679
PGSC0003DMG400013256 Solanum tuberosum PGSC0003DMG400013256 I 0.679
GLYMA02G00870 Glycine max GLYMA02G00870 I 0.678
orange1.1g043029m.g Citrus sinensis orange1.1g043029m.g I 0.677
Ciclev10023352m.g Citrus clementina Ciclev10023352m.g I 0.677
Eucgr.H04254 Eucalyptus grandis Eucgr.H04254 I 0.677
Gorai.011G173000 Gossypium raimondii Gorai.011G173000 I 0.677
Si027485m.g Setaria italica Si027485m.g I 0.677
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.677
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.677
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.677