Si031946m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si031946m.g T005358_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD

HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.788 0.824
P93392_TOBAC
M09731_2.00
Nicotiana tabacum Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.702 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si031946m AP2 197 248

Links

Other AP2 family TFs
Other Setaria italica TFs

277 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.860
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.845
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.842
OB09G27130 Oryza brachyantha OB09G27130 I 0.842
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.839
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.839
OBART09G20410 Oryza barthii OBART09G20410 I 0.839
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.839
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.839
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.839
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.839
OS09G0572000 Oryza sativa OS09G0572000 I 0.839
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.839
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.839
Si028088m.g Setaria italica Si028088m.g I 0.820
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.811
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.811
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.811
Si027485m.g Setaria italica Si027485m.g I 0.811
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.809
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.809
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.809
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.809
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.807
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.805
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.800
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.800
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.799
Traes_4DS_9C01B536B Triticum aestivum Traes_4DS_9C01B536B I 0.797
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.794
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.794
ERF094 Arabidopsis thaliana AT1G06160 D 0.788
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.787
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.787
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.784
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.780
Pavir.Bb00653 Panicum virgatum Pavir.Bb00653 I 0.780
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.779
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.778
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.773
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.771
Cla006080 Citrullus lanatus Cla006080 I 0.770
Ca_12221 Cicer arietinum Ca_12221 I 0.770
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.770
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.768
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.768
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.768
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.768
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.767
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.767
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.766
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.766
MDP0000127134 Malus domestica MDP0000127134 I 0.765
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.765
Cla021850 Citrullus lanatus Cla021850 I 0.765
Pm009382 Prunus mume Pm009382 I 0.765
Ca_23170 Cicer arietinum Ca_23170 I 0.765
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.765
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.765
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.765
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.765
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.765
Cla007697 Citrullus lanatus Cla007697 I 0.765
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.765
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.765
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.765
MDP0000167207 Malus domestica MDP0000167207 I 0.765
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.765
MDP0000235313 Malus domestica MDP0000235313 I 0.765
29895.m000321 Ricinus communis 29895.m000321 I 0.763
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.763
Gorai.013G186800 Gossypium raimondii Gorai.013G186800 I 0.762
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.761
TCM_004052 Theobroma cacao TCM_004052 I 0.761
Si028219m.g Setaria italica Si028219m.g I 0.761
Si028135m.g Setaria italica Si028135m.g I 0.761
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.760
Sb05g026843 Sorghum bicolor Sb05g026843 I 0.760
TCM_020871 Theobroma cacao TCM_020871 I 0.758
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.757
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.757
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.757
Pm020604 Prunus mume Pm020604 I 0.757
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.757
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.756
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.756
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.755
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.755
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.755
MDP0000855671 Malus domestica MDP0000855671 I 0.754
GLYMA02G00870 Glycine max GLYMA02G00870 I 0.753
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.753
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.752
TCM_004056 Theobroma cacao TCM_004056 I 0.751
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.749
F775_22020 Aegilops tauschii F775_22020 I 0.749
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.749
MTR_7g096830 Medicago truncatula MTR_7g096830 I 0.748
GLYMA19G34670 Glycine max GLYMA19G34670 I 0.748
VIT_07s0005g03270 Vitis vinifera VIT_07s0005g03270 I 0.746
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.746
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.745
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.745
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.745
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.745
F775_52314 Aegilops tauschii F775_52314 I 0.745
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.745
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.744
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.744
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.744
GLYMA13G18340 Glycine max GLYMA13G18340 I 0.741
Gorai.011G173000 Gossypium raimondii Gorai.011G173000 I 0.740
Cla015066 Citrullus lanatus Cla015066 I 0.740
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.740
Pavir.J17768 Panicum virgatum Pavir.J17768 I 0.738
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.737
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.737
TRIUR3_29784 Triticum urartu TRIUR3_29784 I 0.737
29584.m000234 Ricinus communis 29584.m000234 I 0.737
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.736
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.735
F775_22331 Aegilops tauschii F775_22331 I 0.735
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.734
F775_25471 Aegilops tauschii F775_25471 I 0.734
Si038911m.g Setaria italica Si038911m.g I 0.732
Bostr.25219s0341 Boechera stricta Bostr.25219s0341 I 0.732
Cagra.1671s0247 Capsella grandiflora Cagra.1671s0247 I 0.732
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.732
Carubv10010105m.g Capsella rubella Carubv10010105m.g I 0.732
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.730
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.730
Bo5g007280 Brassica oleracea Bo5g007280 I 0.729
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.729
Bo8g114710 Brassica oleracea Bo8g114710 I 0.729
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.729
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.729
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.729
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.729
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.729
29900.m001561 Ricinus communis 29900.m001561 I 0.728
Si032815m.g Setaria italica Si032815m.g I 0.728
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.728
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.727
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.726
Si033089m.g Setaria italica Si033089m.g I 0.726
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.725
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.725
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.724
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.724
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.724
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.724
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.723
MTR_1g070020 Medicago truncatula MTR_1g070020 I 0.721
MTR_1g070015 Medicago truncatula MTR_1g070015 I 0.721
mgf023779m Mimulus guttatus mgf023779m I 0.721
MTR_1g070000 Medicago truncatula MTR_1g070000 I 0.721
MTR_1g070045 Medicago truncatula MTR_1g070045 I 0.721
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.720
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.720
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.720
Thhalv10008518m.g Eutrema salsugineum Thhalv10008518m.g I 0.719
OS07G0410700 Oryza sativa OS07G0410700 I 0.719
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.719
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.719
Bra015478 Brassica rapa Bra015478 I 0.719
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.719
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.719
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.719
OBART07G11340 Oryza barthii OBART07G11340 I 0.719
BGIOSGA024428 Oryza indica BGIOSGA024428 I 0.719
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.719
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.719
mgf020623m Mimulus guttatus mgf020623m I 0.718
PK23186.1 Cannabis sativa PK23186.1 I 0.718
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.718
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.718
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.717
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.717
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.717
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.717
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.717
29680.m001678 Ricinus communis 29680.m001678 I 0.717
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.717
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.716
ORA59 Arabidopsis lyrata fgenesh2_kg.1__587__AT1G06160.1 I 0.716
Ca_12081 Cicer arietinum Ca_12081 I 0.716
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.715
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.715
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.715
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.715
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.714
MTR_1g069985 Medicago truncatula MTR_1g069985 I 0.714
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.714
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.714
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.714
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.713
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.713
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.710
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.710
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.709
mgf021081m Mimulus guttatus mgf021081m I 0.709
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.707
MTR_4g054860 Medicago truncatula MTR_4g054860 I 0.706
MDP0000447570 Malus domestica MDP0000447570 I 0.704
Sb05g022110 Sorghum bicolor Sb05g022110 I 0.704
MDP0000246808 Malus domestica MDP0000246808 I 0.704
mgf023600m Mimulus guttatus mgf023600m I 0.703
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.702
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.702
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.702
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.702
OBART07G11330 Oryza barthii OBART07G11330 I 0.702
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.702
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.699
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.699
TCM_026234 Theobroma cacao TCM_026234 I 0.698
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.698
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.698
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.698
mgf018693m Mimulus guttatus mgf018693m I 0.697
Traes_4BS_591F7718A Triticum aestivum Traes_4BS_591F7718A N 0.697
OBART03G03890 Oryza barthii OBART03G03890 I 0.696
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.696
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.696
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.696
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.696
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.696
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.696
OS03G0150200 Oryza sativa OS03G0150200 I 0.696
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.696
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.694
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.693
Traes_2BS_0EE99D4A6 Triticum aestivum Traes_2BS_0EE99D4A6 I 0.692
MTR_4g054360 Medicago truncatula MTR_4g054360 I 0.691
AMTR_s00021p00184450 Amborella trichopoda AMTR_s00021p00184450 I 0.690
Traes_4AL_F18648C49 Triticum aestivum Traes_4AL_F18648C49 I 0.689
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.689
orange1.1g043029m.g Citrus sinensis orange1.1g043029m.g I 0.688
Ciclev10023352m.g Citrus clementina Ciclev10023352m.g I 0.688
chr5.CM0494.320.nc Lotus japonicus chr5.CM0494.320.nc I 0.688
F775_22648 Aegilops tauschii F775_22648 N 0.688
GSMUA_Achr6G27040_001 Musa acuminata GSMUA_Achr6G27040_001 I 0.687
Bra032433 Brassica rapa Bra032433 I 0.686
Lus10021873.g Linum usitatissimum Lus10021873.g I 0.685
SapurV1A.0006s0840 Salix purpurea SapurV1A.0006s0840 I 0.685
SapurV1A.3984s0010 Salix purpurea SapurV1A.3984s0010 I 0.685
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.684
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.684
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.684
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.684
MDP0000322279 Malus domestica MDP0000322279 I 0.684
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.683
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.683
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.683
Si039759m.g Setaria italica Si039759m.g I 0.683
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.683
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.682
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.682
Bo3g143350 Brassica oleracea Bo3g143350 I 0.682
Bra010880 Brassica rapa Bra010880 I 0.682
SELMODRAFT_80895 Selaginella moellendorffii SELMODRAFT_80895 I 0.681
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.681
SELMODRAFT_37123 Selaginella moellendorffii SELMODRAFT_37123 I 0.681
GRMZM2G024871 Zea mays GRMZM2G024871 I 0.680
Sb01g020555 Sorghum bicolor Sb01g020555 I 0.680
F775_01237 Aegilops tauschii F775_01237 N 0.680
evm.TU.supercontig_101.16 Carica papaya evm.TU.supercontig_101.16 I 0.680
LPERR10G08470 Leersia perrieri LPERR10G08470 I 0.680
Si039310m.g Setaria italica Si039310m.g I 0.680
TCM_026233 Theobroma cacao TCM_026233 I 0.679
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.679
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.678
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.678
Ca_07754 Cicer arietinum Ca_07754 I 0.678
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.678
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.678
Lus10006579.g Linum usitatissimum Lus10006579.g I 0.677