Si028088m.g (Setaria italica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Si028088m.g T005338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.789 0.824
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.703 0.765
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si028088m AP2 157 208

Links

Other AP2 family TFs
Other Setaria italica TFs

270 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.825
Si027485m.g Setaria italica Si027485m.g I 0.825
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.825
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.822
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.822
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.822
Pavir.Ba02781 Panicum virgatum Pavir.Ba02781 I 0.820
Pavir.J37124 Panicum virgatum Pavir.J37124 I 0.820
Si031946m.g Setaria italica Si031946m.g I 0.820
OB09G27130 Oryza brachyantha OB09G27130 I 0.818
OPUNC09G18690 Oryza punctata OPUNC09G18690 I 0.818
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.815
OLONG_005597 Oryza longistaminata OLONG_005597 I 0.814
OGLUM09G21150 Oryza glumaepatula OGLUM09G21150 I 0.814
ONIVA09G20840 Oryza nivara ONIVA09G20840 I 0.814
GRMZM2G123119 Zea mays GRMZM2G123119 I 0.814
Sb02g012630 Sorghum bicolor Sb02g012630 I 0.814
LPERR09G16380 Leersia perrieri LPERR09G16380 I 0.814
OS09G0572000 Oryza sativa OS09G0572000 I 0.814
OBART09G20410 Oryza barthii OBART09G20410 I 0.814
ORUFI09G22040 Oryza rufipogon ORUFI09G22040 I 0.814
BGIOSGA031313 Oryza indica BGIOSGA031313 I 0.814
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.812
Gorai.001G252600 Gossypium raimondii Gorai.001G252600 I 0.791
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.790
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.790
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.790
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.790
ERF094 Arabidopsis thaliana AT1G06160 D 0.789
Pavir.J01078 Panicum virgatum Pavir.J01078 I 0.785
Sb05g026843 Sorghum bicolor Sb05g026843 I 0.777
VIT_07s0005g03230 Vitis vinifera VIT_07s0005g03230 I 0.776
VIT_07s0005g03260 Vitis vinifera VIT_07s0005g03260 I 0.776
Gorai.001G253000 Gossypium raimondii Gorai.001G253000 I 0.776
GSMUA_Achr5G19610_001 Musa acuminata GSMUA_Achr5G19610_001 I 0.773
GSMUA_Achr11G22020_001 Musa acuminata GSMUA_Achr11G22020_001 I 0.773
Traes_4DS_9C01B536B Triticum aestivum Traes_4DS_9C01B536B I 0.772
Eucgr.K03266 Eucalyptus grandis Eucgr.K03266 I 0.770
Si028219m.g Setaria italica Si028219m.g I 0.769
Si028135m.g Setaria italica Si028135m.g I 0.769
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.769
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.768
MDP0000855671 Malus domestica MDP0000855671 I 0.767
Gorai.001G176800 Gossypium raimondii Gorai.001G176800 I 0.765
Eucgr.H03088 Eucalyptus grandis Eucgr.H03088 I 0.765
Pavir.Bb00652 Panicum virgatum Pavir.Bb00652 I 0.764
Ca_12221 Cicer arietinum Ca_12221 I 0.762
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.761
Cucsa.255340 Cucumis sativus Cucsa.255340 I 0.761
Pavir.Bb00653 Panicum virgatum Pavir.Bb00653 I 0.761
TCM_020871 Theobroma cacao TCM_020871 I 0.759
Cla021850 Citrullus lanatus Cla021850 I 0.759
Aquca_034_00376 Aquilegia coerulea Aquca_034_00376 I 0.759
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.759
GSMUA_Achr4G12060_001 Musa acuminata GSMUA_Achr4G12060_001 I 0.759
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.758
Pm020604 Prunus mume Pm020604 I 0.758
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.758
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.757
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.757
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.757
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.757
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.757
Pavir.J17768 Panicum virgatum Pavir.J17768 I 0.755
TCM_004052 Theobroma cacao TCM_004052 I 0.754
Gorai.013G186800 Gossypium raimondii Gorai.013G186800 I 0.753
GSMUA_AchrUn_randomG10760_001 Musa acuminata GSMUA_AchrUn_randomG10760_001 I 0.753
MTR_7g096830 Medicago truncatula MTR_7g096830 I 0.753
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.753
Cla006080 Citrullus lanatus Cla006080 I 0.752
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.752
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.751
GLYMA10G33060 Glycine max GLYMA10G33060 I 0.751
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.751
Ca_23170 Cicer arietinum Ca_23170 I 0.751
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.751
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.751
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.751
MDP0000167207 Malus domestica MDP0000167207 I 0.751
MDP0000235313 Malus domestica MDP0000235313 I 0.751
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.751
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.751
Pm009382 Prunus mume Pm009382 I 0.751
MDP0000127134 Malus domestica MDP0000127134 I 0.751
GLYMA20G34570 Glycine max GLYMA20G34570 I 0.751
Cla007697 Citrullus lanatus Cla007697 I 0.751
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.750
Cucsa.388530 Cucumis sativus Cucsa.388530 I 0.750
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.750
29895.m000321 Ricinus communis 29895.m000321 I 0.749
GLYMA13G18350 Glycine max GLYMA13G18350 I 0.747
GLYMA13G18390 Glycine max GLYMA13G18390 I 0.747
AMTR_s00009p00143340 Amborella trichopoda AMTR_s00009p00143340 I 0.746
MTR_1g069940 Medicago truncatula MTR_1g069940 I 0.746
TRIUR3_29784 Triticum urartu TRIUR3_29784 I 0.744
Gorai.011G173000 Gossypium raimondii Gorai.011G173000 I 0.744
SapurV1A.0132s0310 Salix purpurea SapurV1A.0132s0310 I 0.743
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.742
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.742
Si038911m.g Setaria italica Si038911m.g I 0.741
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.739
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.739
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.739
GLYMA02G00870 Glycine max GLYMA02G00870 I 0.739
F775_25471 Aegilops tauschii F775_25471 I 0.739
LPERR07G06830 Leersia perrieri LPERR07G06830 I 0.738
Pavir.Ia00066 Panicum virgatum Pavir.Ia00066 I 0.737
F775_22331 Aegilops tauschii F775_22331 I 0.736
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.736
Traes_4DL_CB92B5ABB Triticum aestivum Traes_4DL_CB92B5ABB I 0.736
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.736
Gorai.004G057000 Gossypium raimondii Gorai.004G057000 I 0.735
GLYMA19G34670 Glycine max GLYMA19G34670 I 0.734
Cla015066 Citrullus lanatus Cla015066 I 0.734
OGLUM07G10870 Oryza glumaepatula OGLUM07G10870 I 0.733
Bostr.25219s0341 Boechera stricta Bostr.25219s0341 I 0.733
Carubv10010105m.g Capsella rubella Carubv10010105m.g I 0.733
Cagra.1671s0247 Capsella grandiflora Cagra.1671s0247 I 0.733
AC233933.1_FG001 Zea mays AC233933.1_FG001 I 0.733
VIT_07s0005g03270 Vitis vinifera VIT_07s0005g03270 I 0.732
ONIVA07G09500 Oryza nivara ONIVA07G09500 I 0.732
OBART07G11340 Oryza barthii OBART07G11340 I 0.732
OPUNC07G10310 Oryza punctata OPUNC07G10310 I 0.732
OGLUM07G10880 Oryza glumaepatula OGLUM07G10880 I 0.732
ORGLA07G0097100 Oryza glaberrima ORGLA07G0097100 I 0.732
Thhalv10008518m.g Eutrema salsugineum Thhalv10008518m.g I 0.732
OS07G0410700 Oryza sativa OS07G0410700 I 0.732
BGIOSGA024428 Oryza indica BGIOSGA024428 I 0.732
ORUFI07G11590 Oryza rufipogon ORUFI07G11590 I 0.732
Bo5g007280 Brassica oleracea Bo5g007280 I 0.731
Bo8g114710 Brassica oleracea Bo8g114710 I 0.731
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.731
Pavir.Bb00962 Panicum virgatum Pavir.Bb00962 I 0.731
Pavir.Ba02374 Panicum virgatum Pavir.Ba02374 I 0.731
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.731
Gorai.001G253100 Gossypium raimondii Gorai.001G253100 I 0.731
29680.m001678 Ricinus communis 29680.m001678 I 0.731
GLYMA10G04170 Glycine max GLYMA10G04170 I 0.730
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.729
Traes_4AL_5E86DF14B Triticum aestivum Traes_4AL_5E86DF14B I 0.729
F775_22020 Aegilops tauschii F775_22020 I 0.729
Traes_4AL_1A0E673DC Triticum aestivum Traes_4AL_1A0E673DC I 0.729
Pavir.Ib03413 Panicum virgatum Pavir.Ib03413 I 0.728
GLYMA13G18340 Glycine max GLYMA13G18340 I 0.727
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.726
Traes_5BL_4E044468C Triticum aestivum Traes_5BL_4E044468C I 0.725
Traes_5DL_53D8DF9CD Triticum aestivum Traes_5DL_53D8DF9CD I 0.725
MLOC_77420 Hordeum vulgare MLOC_77420 I 0.725
Traes_4BL_39AE2989D Triticum aestivum Traes_4BL_39AE2989D I 0.725
F775_52314 Aegilops tauschii F775_52314 I 0.725
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.724
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.723
29584.m000234 Ricinus communis 29584.m000234 I 0.723
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.723
Gorai.007G145800 Gossypium raimondii Gorai.007G145800 I 0.722
TCM_004056 Theobroma cacao TCM_004056 I 0.722
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.721
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.721
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.721
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.721
Bra015478 Brassica rapa Bra015478 I 0.720
mgf020623m Mimulus guttatus mgf020623m I 0.719
MDP0000246808 Malus domestica MDP0000246808 I 0.718
MDP0000447570 Malus domestica MDP0000447570 I 0.718
GSMUA_Achr3G15550_001 Musa acuminata GSMUA_Achr3G15550_001 I 0.718
ORA59 Arabidopsis lyrata fgenesh2_kg.1__587__AT1G06160.1 I 0.717
GLYMA13G18370 Glycine max GLYMA13G18370 I 0.716
Pavir.J28684 Panicum virgatum Pavir.J28684 I 0.715
Pavir.Ba03491 Panicum virgatum Pavir.Ba03491 I 0.715
29900.m001561 Ricinus communis 29900.m001561 I 0.715
Sb02g005840 Sorghum bicolor Sb02g005840 I 0.715
Sb02g005810 Sorghum bicolor Sb02g005810 I 0.715
Si033089m.g Setaria italica Si033089m.g I 0.713
GLYMA03G31940 Glycine max GLYMA03G31940 I 0.711
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.711
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.711
GLYMA19G34696 Glycine max GLYMA19G34696 I 0.711
MTR_4g054860 Medicago truncatula MTR_4g054860 I 0.711
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.710
mgf021081m Mimulus guttatus mgf021081m I 0.710
MTR_1g070020 Medicago truncatula MTR_1g070020 I 0.709
ORUFI07G11580 Oryza rufipogon ORUFI07G11580 I 0.709
ONIVA01G50300 Oryza nivara ONIVA01G50300 I 0.709
MTR_1g070000 Medicago truncatula MTR_1g070000 I 0.709
BGIOSGA024429 Oryza indica BGIOSGA024429 I 0.709
ORGLA07G0097000 Oryza glaberrima ORGLA07G0097000 I 0.709
OBART07G11330 Oryza barthii OBART07G11330 I 0.709
MTR_1g070015 Medicago truncatula MTR_1g070015 I 0.707
MTR_1g070045 Medicago truncatula MTR_1g070045 I 0.707
mgf023779m Mimulus guttatus mgf023779m I 0.707
MTR_4g054360 Medicago truncatula MTR_4g054360 I 0.706
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.704
Pavir.Hb01232 Panicum virgatum Pavir.Hb01232 N 0.704
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.704
PK23186.1 Cannabis sativa PK23186.1 I 0.704
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.704
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.704
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.703
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.703
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.703
mgf023600m Mimulus guttatus mgf023600m I 0.703
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.703
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.702
Ca_12081 Cicer arietinum Ca_12081 I 0.702
MTR_1g069985 Medicago truncatula MTR_1g069985 I 0.702
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.701
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.701
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.701
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.700
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.700
GRMZM2G379652 Zea mays GRMZM2G379652 I 0.700
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.700
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.700
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.700
Gorai.013G186700 Gossypium raimondii Gorai.013G186700 I 0.699
TCM_026234 Theobroma cacao TCM_026234 I 0.699
mgf018693m Mimulus guttatus mgf018693m I 0.698
GRMZM2G478965 Zea mays GRMZM2G478965 I 0.696
Traes_4AL_F18648C49 Triticum aestivum Traes_4AL_F18648C49 I 0.694
Si032815m.g Setaria italica Si032815m.g I 0.694
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.693
BGIOSGA011868 Oryza indica BGIOSGA011868 I 0.692
LPERR03G03540 Leersia perrieri LPERR03G03540 I 0.692
OLONG_008277 Oryza longistaminata OLONG_008277 I 0.692
OGLUM03G03790 Oryza glumaepatula OGLUM03G03790 I 0.692
ONIVA03G03670 Oryza nivara ONIVA03G03670 I 0.692
OS03G0150200 Oryza sativa OS03G0150200 I 0.692
OBART03G03890 Oryza barthii OBART03G03890 I 0.692
ORUFI03G03630 Oryza rufipogon ORUFI03G03630 I 0.692
ORGLA03G0036700 Oryza glaberrima ORGLA03G0036700 I 0.692
F775_22648 Aegilops tauschii F775_22648 N 0.691
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.691
F775_01237 Aegilops tauschii F775_01237 N 0.691
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.691
Sb05g022110 Sorghum bicolor Sb05g022110 I 0.690
OPUNC03G03600 Oryza punctata OPUNC03G03600 I 0.690
Traes_2BS_0EE99D4A6 Triticum aestivum Traes_2BS_0EE99D4A6 I 0.690
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.689
Traes_2BL_304012B04 Triticum aestivum Traes_2BL_304012B04 N 0.688
Bra032433 Brassica rapa Bra032433 I 0.688
Traes_2BL_3A3353970 Triticum aestivum Traes_2BL_3A3353970 N 0.688
Traes_2AL_9E90C2488 Triticum aestivum Traes_2AL_9E90C2488 N 0.687
OS03G0860100 Oryza sativa OS03G0860100 I 0.687
ORUFI03G43580 Oryza rufipogon ORUFI03G43580 I 0.687
OMERI03G15490 Oryza meridionalis OMERI03G15490 I 0.687
OGLUM03G41640 Oryza glumaepatula OGLUM03G41640 I 0.687
OBART03G41810 Oryza barthii OBART03G41810 I 0.687
BGIOSGA009392 Oryza indica BGIOSGA009392 I 0.687
ONIVA01G48030 Oryza nivara ONIVA01G48030 I 0.687
OLONG_002067 Oryza longistaminata OLONG_002067 I 0.687
ORGLA03G0387300 Oryza glaberrima ORGLA03G0387300 I 0.687
LPERR10G08470 Leersia perrieri LPERR10G08470 I 0.686
Si039310m.g Setaria italica Si039310m.g I 0.686
BRADI1G75040 Brachypodium distachyon BRADI1G75040 I 0.686
Sb01g020555 Sorghum bicolor Sb01g020555 I 0.686
GRMZM2G024871 Zea mays GRMZM2G024871 I 0.686
SapurV1A.0816s0060 Salix purpurea SapurV1A.0816s0060 I 0.685
Traes_2AL_0B28B6DBE Triticum aestivum Traes_2AL_0B28B6DBE I 0.683
MDP0000322279 Malus domestica MDP0000322279 I 0.682
Pavir.Ia01823 Panicum virgatum Pavir.Ia01823 I 0.681
TCM_026233 Theobroma cacao TCM_026233 I 0.680
Pavir.Ib00287 Panicum virgatum Pavir.Ib00287 I 0.680
MLOC_238 Hordeum vulgare MLOC_238 I 0.680
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.680
OB03G13950 Oryza brachyantha OB03G13950 I 0.680
Sb01g046920 Sorghum bicolor Sb01g046920 I 0.680
Si039759m.g Setaria italica Si039759m.g I 0.680
Pavir.J22854 Panicum virgatum Pavir.J22854 I 0.680
AC198979.4_FG009 Zea mays AC198979.4_FG009 I 0.680
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.679