Cagra.0567s0011 (Capsella grandiflora)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Cagra.0567s0011 T022726_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.0567s0011.1.p B3 306 407

Links

Other B3 family TFs
Other Capsella grandiflora TFs

180 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.990
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.990
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.990
VAL1 Arabidopsis thaliana AT2G30470 N 0.980
Bra022801 Brassica rapa Bra022801 N 0.970
Bra021635 Brassica rapa Bra021635 N 0.970
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.970
Bo3g024640 Brassica oleracea Bo3g024640 N 0.970
Bo4g173060 Brassica oleracea Bo4g173060 N 0.949
Bra018313 Brassica rapa Bra018313 N 0.939
Bo4g058460 Brassica oleracea Bo4g058460 N 0.939
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.899
TCM_042290 Theobroma cacao TCM_042290 N 0.899
PK13763.1 Cannabis sativa PK13763.1 N 0.899
PK09020.1 Cannabis sativa PK09020.1 N 0.899
Ca_23185 Cicer arietinum Ca_23185 N 0.889
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.889
Pm003031 Prunus mume Pm003031 N 0.889
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.889
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.889
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.889
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.889
TCM_019701 Theobroma cacao TCM_019701 N 0.889
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.889
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.879
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.879
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.879
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.879
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.879
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.879
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.879
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.879
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.879
Pm000247 Prunus mume Pm000247 N 0.879
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.879
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.879
29915.m000469 Ricinus communis 29915.m000469 N 0.879
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.879
Cla008225 Citrullus lanatus Cla008225 N 0.869
Cla018330 Citrullus lanatus Cla018330 N 0.869
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.869
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.869
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.869
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.869
MDP0000267885 Malus domestica MDP0000267885 N 0.869
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.869
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.869
Bra023968 Brassica rapa Bra023968 N 0.869
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.869
Bo7g115560 Brassica oleracea Bo7g115560 N 0.869
Bo7g115570 Brassica oleracea Bo7g115570 N 0.869
MDP0000229344 Malus domestica MDP0000229344 N 0.869
MDP0000127640 Malus domestica MDP0000127640 N 0.869
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.869
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.869
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.869
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.869
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.869
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.869
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.869
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.869
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.859
Si028829m.g Setaria italica Si028829m.g N 0.859
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.859
29976.m000497 Ricinus communis 29976.m000497 N 0.859
mgf007363m Mimulus guttatus mgf007363m N 0.859
Ca_08924 Cicer arietinum Ca_08924 N 0.859
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.859
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.859
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.859
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.859
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.859
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.859
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.859
F775_32613 Aegilops tauschii F775_32613 N 0.859
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.859
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.859
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.859
OBART07G26400 Oryza barthii OBART07G26400 N 0.859
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.859
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.859
OB07G31850 Oryza brachyantha OB07G31850 N 0.859
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.859
OS07G0679700 Oryza sativa OS07G0679700 N 0.859
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.859
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.859
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.859
Pavir.Ba00225 Panicum virgatum Pavir.Ba00225 N 0.848
Si028834m.g Setaria italica Si028834m.g N 0.848
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.848
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.848
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.848
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.848
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.848
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 0.848
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.848
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.848
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.848
OBART07G18780 Oryza barthii OBART07G18780 N 0.838
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.838
PK04158.1 Cannabis sativa PK04158.1 N 0.838
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.838
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.838
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.838
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.838
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.838
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.838
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.838
mgf007846m Mimulus guttatus mgf007846m N 0.838
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.838
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.838
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.838
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.838
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.838
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.838
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.838
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.838
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.838
TCM_029976 Theobroma cacao TCM_029976 N 0.838
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.838
Pm009906 Prunus mume Pm009906 N 0.838
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.838
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.838
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.828
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.828
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.828
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.828
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.828
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.828
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.828
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.828
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.828
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.828
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.828
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.828
mgf013365m Mimulus guttatus mgf013365m N 0.828
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.828
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.828
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.828
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.826
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.818
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.818
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.818
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.818
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.818
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.818
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.818
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.818
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.818
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.818
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.808
OS07G0563350 Oryza sativa OS07G0563350 N 0.808
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.808
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.808
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.804
VAL2 Arabidopsis thaliana AT4G32010 N 0.804
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.804
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.804
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.798
29917.m001969 Ricinus communis 29917.m001969 N 0.798
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.798
mgf024907m Mimulus guttatus mgf024907m N 0.778
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.778
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.778
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.761
Ca_00244 Cicer arietinum Ca_00244 N 0.760
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.758
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.758
Bra013535 Brassica rapa Bra013535 N 0.758
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.758
Ca_15659 Cicer arietinum Ca_15659 N 0.747
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.747
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.747
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.747
Bo1g024250 Brassica oleracea Bo1g024250 N 0.747
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.747
MTR_5g075410 Medicago truncatula MTR_5g075410 N 0.742
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.737
F775_30051 Aegilops tauschii F775_30051 N 0.719
orange1.1g039386m.g Citrus sinensis orange1.1g039386m.g N 0.710