Pavir.Ba00225 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Ba00225 T023786_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ba00225.1.p B3 360 461

Links

Other B3 family TFs
Other Panicum virgatum TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si028834m.g Setaria italica Si028834m.g N 1.000
Pavir.Bb03754 Panicum virgatum Pavir.Bb03754 N 1.000
OBART07G26400 Oryza barthii OBART07G26400 N 0.990
OLONG_008212 Oryza longistaminata OLONG_008212 N 0.990
OB07G31850 Oryza brachyantha OB07G31850 N 0.990
OGLUM07G26430 Oryza glumaepatula OGLUM07G26430 N 0.990
LPERR07G23240 Leersia perrieri LPERR07G23240 N 0.990
GRMZM2G158162 Zea mays GRMZM2G158162 N 0.990
GRMZM2G172621 Zea mays GRMZM2G172621 N 0.990
OMERI07G23020 Oryza meridionalis OMERI07G23020 N 0.990
ORGLA07G0207500 Oryza glaberrima ORGLA07G0207500 N 0.990
Traes_2AS_F4CEC9849 Triticum aestivum Traes_2AS_F4CEC9849 N 0.990
Traes_2DS_B1C947D2B Triticum aestivum Traes_2DS_B1C947D2B N 0.990
TRIUR3_04238 Triticum urartu TRIUR3_04238 N 0.990
Sb02g043000 Sorghum bicolor Sb02g043000 N 0.990
OS07G0679700 Oryza sativa OS07G0679700 N 0.990
F775_32613 Aegilops tauschii F775_32613 N 0.990
ORUFI07G27410 Oryza rufipogon ORUFI07G27410 N 0.990
ONIVA07G26110 Oryza nivara ONIVA07G26110 N 0.990
Traes_2BS_5B00A8C50 Triticum aestivum Traes_2BS_5B00A8C50 N 0.990
BGIOSGA023709 Oryza indica BGIOSGA023709 N 0.990
BRADI1G17680 Brachypodium distachyon BRADI1G17680 N 0.980
PDK_20s13009463g004 Phoenix dactylifera PDK_20s13009463g004 N 0.949
GSMUA_Achr5G27930_001 Musa acuminata GSMUA_Achr5G27930_001 N 0.929
PDK_20s13009466g004 Phoenix dactylifera PDK_20s13009466g004 N 0.929
GSMUA_Achr8G01750_001 Musa acuminata GSMUA_Achr8G01750_001 N 0.919
evm.TU.supercontig_0.91 Carica papaya evm.TU.supercontig_0.91 N 0.909
TCM_019701 Theobroma cacao TCM_019701 N 0.909
Bo7g115560 Brassica oleracea Bo7g115560 N 0.909
Bra023968 Brassica rapa Bra023968 N 0.909
TCM_042290 Theobroma cacao TCM_042290 N 0.909
Bo7g115570 Brassica oleracea Bo7g115570 N 0.909
Bostr.7867s1055 Boechera stricta Bostr.7867s1055 N 0.909
Thhalv10024481m.g Eutrema salsugineum Thhalv10024481m.g N 0.909
Gorai.003G152700 Gossypium raimondii Gorai.003G152700 N 0.899
Gorai.005G004300 Gossypium raimondii Gorai.005G004300 N 0.899
Gorai.011G127500 Gossypium raimondii Gorai.011G127500 N 0.899
Lus10025226.g Linum usitatissimum Lus10025226.g N 0.899
29915.m000469 Ricinus communis 29915.m000469 N 0.899
orange1.1g002708m.g Citrus sinensis orange1.1g002708m.g N 0.899
Ciclev10011039m.g Citrus clementina Ciclev10011039m.g N 0.899
HSL1 Vitis vinifera VIT_08s0058g01300 N 0.889
POPTR_0006s10880 Populus trichocarpa POPTR_0006s10880 N 0.889
Bo4g173060 Brassica oleracea Bo4g173060 N 0.889
cassava25238.valid.m1 Manihot esculenta cassava25238.valid.m1 N 0.889
AMTR_s00003p00266720 Amborella trichopoda AMTR_s00003p00266720 N 0.889
Ca_23185 Cicer arietinum Ca_23185 N 0.889
Solyc10g075030.1 Solanum lycopersicum Solyc10g075030.1 N 0.889
SapurV1A.0914s0080 Salix purpurea SapurV1A.0914s0080 N 0.889
GLYMA01G32810 Glycine max GLYMA01G32810 N 0.889
mgf007363m Mimulus guttatus mgf007363m N 0.889
POPTR_0016s14350 Populus trichocarpa POPTR_0016s14350 N 0.889
SapurV1A.0065s0470 Salix purpurea SapurV1A.0065s0470 N 0.889
GLYMA03G04330 Glycine max GLYMA03G04330 N 0.889
MTR_4g028130 Medicago truncatula MTR_4g028130 N 0.889
Lus10022741.g Linum usitatissimum Lus10022741.g N 0.879
Lus10025142.g Linum usitatissimum Lus10025142.g N 0.879
PK04158.1 Cannabis sativa PK04158.1 N 0.879
Si028829m.g Setaria italica Si028829m.g N 0.879
gene13877-v1.0-hybrid Fragaria vesca gene13877-v1.0-hybrid N 0.879
PK13763.1 Cannabis sativa PK13763.1 N 0.879
PK09020.1 Cannabis sativa PK09020.1 N 0.879
BGIOSGA025947 Oryza indica BGIOSGA025947 N 0.879
Eucgr.F02704 Eucalyptus grandis Eucgr.F02704 N 0.879
Pavir.Bb03074 Panicum virgatum Pavir.Bb03074 N 0.879
SapurV1A.0028s0060 Salix purpurea SapurV1A.0028s0060 N 0.879
Cucsa.045980 Cucumis sativus Cucsa.045980 N 0.879
Pm003031 Prunus mume Pm003031 N 0.879
Pm000247 Prunus mume Pm000247 N 0.879
OBART07G18780 Oryza barthii OBART07G18780 N 0.879
GRMZM2G008356 Zea mays GRMZM2G008356 N 0.879
Cla008225 Citrullus lanatus Cla008225 N 0.879
LPERR07G16110 Leersia perrieri LPERR07G16110 N 0.879
Solyc06g082520.2 Solanum lycopersicum Solyc06g082520.2 N 0.879
OGLUM07G18530 Oryza glumaepatula OGLUM07G18530 N 0.879
OLONG_013183 Oryza longistaminata OLONG_013183 N 0.879
ORUFI07G19520 Oryza rufipogon ORUFI07G19520 N 0.879
Bra021635 Brassica rapa Bra021635 N 0.879
OMERI07G15550 Oryza meridionalis OMERI07G15550 N 0.879
OPUNC07G17640 Oryza punctata OPUNC07G17640 N 0.879
ORGLA07G0151800 Oryza glaberrima ORGLA07G0151800 N 0.879
ONIVA07G17160 Oryza nivara ONIVA07G17160 N 0.879
Sb02g036430 Sorghum bicolor Sb02g036430 N 0.879
PRUPE_ppa001229mg Prunus persica PRUPE_ppa001229mg N 0.879
PRUPE_ppa001234mg Prunus persica PRUPE_ppa001234mg N 0.879
OPUNC07G24850 Oryza punctata OPUNC07G24850 N 0.869
MDP0000267885 Malus domestica MDP0000267885 N 0.869
GLYMA11G31234 Glycine max GLYMA11G31234 N 0.869
GLYMA18G05840 Glycine max GLYMA18G05840 N 0.869
VAL3 Vitis vinifera VIT_00s0181g00260 N 0.869
Ciclev10000225m.g Citrus clementina Ciclev10000225m.g N 0.869
Pm009906 Prunus mume Pm009906 N 0.869
Bra018313 Brassica rapa Bra018313 N 0.869
Pavir.Ba00654 Panicum virgatum Pavir.Ba00654 N 0.869
Bo4g058460 Brassica oleracea Bo4g058460 N 0.869
Solyc02g079020.2 Solanum lycopersicum Solyc02g079020.2 N 0.869
Gorai.011G022400 Gossypium raimondii Gorai.011G022400 N 0.869
POPTR_0019s15070 Populus trichocarpa POPTR_0019s15070 N 0.869
PRUPE_ppa001220mg Prunus persica PRUPE_ppa001220mg N 0.869
Bo3g024640 Brassica oleracea Bo3g024640 N 0.869
gene28098-v1.0-hybrid Fragaria vesca gene28098-v1.0-hybrid N 0.869
evm.TU.supercontig_2.296 Carica papaya evm.TU.supercontig_2.296 N 0.869
MTR_2g011940 Medicago truncatula MTR_2g011940 N 0.869
cassava13133.valid.m1 Manihot esculenta cassava13133.valid.m1 N 0.869
Bra022801 Brassica rapa Bra022801 N 0.869
POPTR_0004s03530 Populus trichocarpa POPTR_0004s03530 N 0.869
MDP0000127640 Malus domestica MDP0000127640 N 0.869
SapurV1A.0044s0150 Salix purpurea SapurV1A.0044s0150 N 0.869
OS07G0563350 Oryza sativa OS07G0563350 N 0.863
Cucsa.177010 Cucumis sativus Cucsa.177010 N 0.859
SapurV1A.0215s0260 Salix purpurea SapurV1A.0215s0260 N 0.859
Thhalv10016263m.g Eutrema salsugineum Thhalv10016263m.g N 0.859
MDP0000229344 Malus domestica MDP0000229344 N 0.859
Ciclev10014219m.g Citrus clementina Ciclev10014219m.g N 0.859
orange1.1g002489m.g Citrus sinensis orange1.1g002489m.g N 0.859
Traes_2DS_3E4E3BEFC Triticum aestivum Traes_2DS_3E4E3BEFC N 0.859
Traes_2AS_C4FD8E351 Triticum aestivum Traes_2AS_C4FD8E351 N 0.859
POPTR_0011s04340 Populus trichocarpa POPTR_0011s04340 N 0.859
29976.m000497 Ricinus communis 29976.m000497 N 0.859
TCM_029976 Theobroma cacao TCM_029976 N 0.859
HSI2 Arabidopsis lyrata scaffold_401535.1 N 0.859
MLOC_4657 Hordeum vulgare MLOC_4657 N 0.859
GSMUA_Achr8G03800_001 Musa acuminata GSMUA_Achr8G03800_001 N 0.859
GLYMA13G31970 Glycine max GLYMA13G31970 N 0.859
Ca_08924 Cicer arietinum Ca_08924 N 0.859
GLYMA15G07350 Glycine max GLYMA15G07350 N 0.859
Cla018330 Citrullus lanatus Cla018330 N 0.859
Traes_2BS_A61094919 Triticum aestivum Traes_2BS_A61094919 N 0.859
gene30690-v1.0-hybrid Fragaria vesca gene30690-v1.0-hybrid N 0.848
POPTR_0013s15330 Populus trichocarpa POPTR_0013s15330 N 0.848
VAL1 Arabidopsis thaliana AT2G30470 N 0.848
BRADI1G24720 Brachypodium distachyon BRADI1G24720 N 0.848
GSMUA_Achr7G00120_001 Musa acuminata GSMUA_Achr7G00120_001 N 0.848
VIT_06s0004g08100 Vitis vinifera VIT_06s0004g08100 N 0.848
Gorai.009G173100 Gossypium raimondii Gorai.009G173100 N 0.848
Eucgr.L01473 Eucalyptus grandis Eucgr.L01473 N 0.848
Bostr.24513s0191 Boechera stricta Bostr.24513s0191 N 0.848
Carubv10022654m.g Capsella rubella Carubv10022654m.g N 0.848
Cagra.0567s0011 Capsella grandiflora Cagra.0567s0011 N 0.848
cassava39646.m1 Manihot esculenta cassava39646.m1 N 0.838
GSMUA_Achr4G23790_001 Musa acuminata GSMUA_Achr4G23790_001 N 0.838
SapurV1A.1353s0040 Salix purpurea SapurV1A.1353s0040 N 0.838
cassava41301.m1 Manihot esculenta cassava41301.m1 N 0.838
VAL2 Arabidopsis thaliana AT4G32010 N 0.835
Carubv10004194m.g Capsella rubella Carubv10004194m.g N 0.835
HSL1 Arabidopsis lyrata scaffold_700997.1 N 0.835
Cagra.12385s0007 Capsella grandiflora Cagra.12385s0007 N 0.835
SELMODRAFT_451626 Selaginella moellendorffii SELMODRAFT_451626 N 0.828
29917.m001969 Ricinus communis 29917.m001969 N 0.828
mgf013365m Mimulus guttatus mgf013365m N 0.828
SELMODRAFT_451631 Selaginella moellendorffii SELMODRAFT_451631 N 0.828
MTR_3g467380 Medicago truncatula MTR_3g467380 N 0.818
Aquca_008_00005 Aquilegia coerulea Aquca_008_00005 N 0.818
Eucgr.E03465 Eucalyptus grandis Eucgr.E03465 N 0.818
Eucgr.B04027 Eucalyptus grandis Eucgr.B04027 N 0.818
Lus10018440.g Linum usitatissimum Lus10018440.g N 0.818
mgf007846m Mimulus guttatus mgf007846m N 0.808
LjSGA_009543.1 Lotus japonicus LjSGA_009543.1 N 0.808
Aquca_063_00016 Aquilegia coerulea Aquca_063_00016 N 0.808
GLYMA14G38492 Glycine max GLYMA14G38492 N 0.798
GLYMA02G40280 Glycine max GLYMA02G40280 N 0.788
Bostr.10689s0100 Boechera stricta Bostr.10689s0100 N 0.788
MLOC_36861 Hordeum vulgare MLOC_36861 N 0.788
Aquca_045_00208 Aquilegia coerulea Aquca_045_00208 N 0.788
mgf024907m Mimulus guttatus mgf024907m N 0.788
Ca_15659 Cicer arietinum Ca_15659 N 0.778
MTR_5g075410 Medicago truncatula MTR_5g075410 N 0.773
PDK_20s1314471g001 Phoenix dactylifera PDK_20s1314471g001 N 0.772
Ca_00244 Cicer arietinum Ca_00244 N 0.771
SELMODRAFT_451634 Selaginella moellendorffii SELMODRAFT_451634 N 0.747
LjSGA_029833.1 Lotus japonicus LjSGA_029833.1 N 0.747
SELMODRAFT_451635 Selaginella moellendorffii SELMODRAFT_451635 N 0.747
Bra013535 Brassica rapa Bra013535 N 0.747
Bo1g024250 Brassica oleracea Bo1g024250 N 0.747
Carubv10004192m.g Capsella rubella Carubv10004192m.g N 0.747
Cagra.3519s0007 Capsella grandiflora Cagra.3519s0007 N 0.737
F775_30051 Aegilops tauschii F775_30051 N 0.729
Cucsa.111990 Cucumis sativus Cucsa.111990 N 0.727
Thhalv10024526m.g Eutrema salsugineum Thhalv10024526m.g N 0.727
Eucgr.E03467 Eucalyptus grandis Eucgr.E03467 N 0.707
orange1.1g039386m.g Citrus sinensis orange1.1g039386m.g N 0.707