CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PRUPE_ppa009765mg
(
Prunus persica
)
BBR
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF06217 (GAGA_bind)
IPR010409
PRUPE_ppa009765mg
T024725_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ23556
BBR
1
278
MDDDALNMRNWGYYEPSFKGHLGLQLMSSMAERDTKAFVPGRDPAVMVSSNGAFHPRDCVVSDAPVPLNYMRDSWVNQRDKFLNMMPANPNYAVLPETSGAHSLQILQPPDSSRDERVARIEEPVANKEGGPSKKRGGGGAPKTPKVKKPRKPKDNNNPSVPRVKPAKKSLDVVINGINMDISGIPIPVCSCTGASQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRGHWARHGTNKFVTIR
Links
Other
BBR
family TFs
Other
Prunus persica
TFs
34 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
C1orf35
Otolemur garnettii
ENSOGAG00000010978
I
1.000
RGD1304587
Rattus norvegicus
ENSRNOG00000002944
I
1.000
Pm005924
Prunus mume
Pm005924
N
0.993
MDP0000826219
Malus domestica
MDP0000826219
N
0.911
MDP0000320521
Malus domestica
MDP0000320521
N
0.889
cassava39873.m1
Manihot esculenta
cassava39873.m1
N
0.844
Traes_4BL_011308A76
Triticum aestivum
Traes_4BL_011308A76
I
0.838
cassava18077.valid.m1
Manihot esculenta
cassava18077.valid.m1
N
0.835
cassava18078.valid.m1
Manihot esculenta
cassava18078.valid.m1
N
0.835
29780.m001393
Ricinus communis
29780.m001393
N
0.826
gene00620-v1.0-hybrid
Fragaria vesca
gene00620-v1.0-hybrid
N
0.816
PK28293.1
Cannabis sativa
PK28293.1
N
0.813
OMERI10G00680
Oryza meridionalis
OMERI10G00680
I
0.810
TCM_011212
Theobroma cacao
TCM_011212
N
0.803
evm.TU.supercontig_2.121
Carica papaya
evm.TU.supercontig_2.121
N
0.799
Gorai.002G171200
Gossypium raimondii
Gorai.002G171200
N
0.789
POPTR_0010s11180
Populus trichocarpa
POPTR_0010s11180
N
0.786
Ciclev10015354m.g
Citrus clementina
Ciclev10015354m.g
N
0.781
chr4.CM0387.290.nc
Lotus japonicus
chr4.CM0387.290.nc
N
0.778
POPTR_0008s13960
Populus trichocarpa
POPTR_0008s13960
N
0.778
orange1.1g022806m.g
Citrus sinensis
orange1.1g022806m.g
N
0.777
Cla005911
Citrullus lanatus
Cla005911
N
0.776
GLYMA08G09780
Glycine max
GLYMA08G09780
N
0.771
SapurV1A.0015s0840
Salix purpurea
SapurV1A.0015s0840
N
0.770
SapurV1A.0055s0040
Salix purpurea
SapurV1A.0055s0040
N
0.768
GLYMA05G26790
Glycine max
GLYMA05G26790
N
0.760
Eucgr.G02067
Eucalyptus grandis
Eucgr.G02067
N
0.758
Gorai.012G183100
Gossypium raimondii
Gorai.012G183100
N
0.756
Cucsa.026600
Cucumis sativus
Cucsa.026600
N
0.746
VIT_01s0011g06380
Vitis vinifera
VIT_01s0011g06380
N
0.727
Gorai.005G154200
Gossypium raimondii
Gorai.005G154200
N
0.726
Lus10040427.g
Linum usitatissimum
Lus10040427.g
N
0.726
Cucsa.026590
Cucumis sativus
Cucsa.026590
N
0.707
Lus10023543.g
Linum usitatissimum
Lus10023543.g
N
0.700