Bra022562 (Brassica rapa)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bra022562 T031478_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.869 0.827
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra022562.1-P bHLH 24 76

Links

Other bHLH family TFs
Other Brassica rapa TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo2g048240 Brassica oleracea Bo2g048240 I 0.903
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.894
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.894
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.890
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.890
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.890
Bo7g110280 Brassica oleracea Bo7g110280 I 0.890
Bra019167 Brassica rapa Bra019167 I 0.878
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.877
Aquca_013_00494 Aquilegia coerulea Aquca_013_00494 N 0.875
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.870
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.870
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.870
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.870
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.870
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.870
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.869
Cagra.2248s0016 Capsella grandiflora Cagra.2248s0016 I 0.869
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.869
Carubv10006264m.g Capsella rubella Carubv10006264m.g I 0.869
Lus10027394.g Linum usitatissimum Lus10027394.g N 0.866
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.859
MDP0000246258 Malus domestica MDP0000246258 I 0.858
Ciclev10006639m.g Citrus clementina Ciclev10006639m.g N 0.858
Pm019419 Prunus mume Pm019419 I 0.858
MTR_1g102370 Medicago truncatula MTR_1g102370 N 0.858
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.858
30147.m014147 Ricinus communis 30147.m014147 N 0.858
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.857
Gorai.008G282400 Gossypium raimondii Gorai.008G282400 N 0.849
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.849
TCM_015033 Theobroma cacao TCM_015033 N 0.849
Bo9g103560 Brassica oleracea Bo9g103560 N 0.849
PK15358.1 Cannabis sativa PK15358.1 I 0.847
PK11667.1 Cannabis sativa PK11667.1 I 0.847
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.847
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.847
Ca_22233 Cicer arietinum Ca_22233 I 0.847
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.847
Bo5g016800 Brassica oleracea Bo5g016800 N 0.843
Thhalv10015297m.g Eutrema salsugineum Thhalv10015297m.g I 0.843
Bra019773 Brassica rapa Bra019773 N 0.843
TCM_016133 Theobroma cacao TCM_016133 I 0.842
TCM_016134 Theobroma cacao TCM_016134 I 0.842