MDP0000246258 (Malus domestica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 MDP0000246258 T050391_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.861 0.673
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000246258 bHLH 71 120

Links

Other bHLH family TFs
Other Malus domestica TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.894
Pm019419 Prunus mume Pm019419 I 0.894
PK15358.1 Cannabis sativa PK15358.1 I 0.883
PK11667.1 Cannabis sativa PK11667.1 I 0.883
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.882
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.882
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.882
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.882
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.882
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.882
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.882
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.882
Bo7g110280 Brassica oleracea Bo7g110280 I 0.882
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.881
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.871
Ca_22233 Cicer arietinum Ca_22233 I 0.871
GLYMA16G32610 Glycine max GLYMA16G32610 I 0.871
GLYMA09G27610 Glycine max GLYMA09G27610 I 0.871
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.870
Ciclev10006639m.g Citrus clementina Ciclev10006639m.g N 0.870
30147.m014147 Ricinus communis 30147.m014147 N 0.870
MTR_1g102370 Medicago truncatula MTR_1g102370 N 0.870
Bra019167 Brassica rapa Bra019167 I 0.869
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.861
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.861
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.858
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.858
Bra022562 Brassica rapa Bra022562 I 0.858
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.858
TCM_016134 Theobroma cacao TCM_016134 I 0.854
TCM_016133 Theobroma cacao TCM_016133 I 0.854
Bostr.13671s0206 Boechera stricta Bostr.13671s0206 I 0.851
Gorai.006G196500 Gossypium raimondii Gorai.006G196500 I 0.848
GLYMA09G27630 Glycine max GLYMA09G27630 N 0.847
Bo2g048240 Brassica oleracea Bo2g048240 I 0.847
MTR_0007s0380 Medicago truncatula MTR_0007s0380 N 0.847
GLYMA10G38630 Glycine max GLYMA10G38630 N 0.846
GLYMA20G29120 Glycine max GLYMA20G29120 N 0.846
MTR_0007s0330 Medicago truncatula MTR_0007s0330 N 0.841
Carubv10011792m.g Capsella rubella Carubv10011792m.g N 0.840
Cagra.0568s0165 Capsella grandiflora Cagra.0568s0165 N 0.840