Gorai.006G196500 (Gossypium raimondii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Gorai.006G196500 T049991_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT4G25400
M09786_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AT4G25400_01 		0.881 0.596
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G196500.1 bHLH 56 108
Gorai.006G196500.2 bHLH 56 108

Links

Other bHLH family TFs
Other Gossypium raimondii TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava45968.m1 Manihot esculenta cassava45968.m1 I 0.893
Gorai.008G282300 Gossypium raimondii Gorai.008G282300 I 0.886
Bostr.7867s0349 Boechera stricta Bostr.7867s0349 I 0.881
AT4G25400 Arabidopsis thaliana AT4G25400 D 0.881
cassava43207.valid.m1 Manihot esculenta cassava43207.valid.m1 I 0.880
Carubv10027166m.g Capsella rubella Carubv10027166m.g I 0.880
POPTR_0012s14080 Populus trichocarpa POPTR_0012s14080 I 0.880
Cagra.0277s0021 Capsella grandiflora Cagra.0277s0021 I 0.880
Bostr.15774s0324 Boechera stricta Bostr.15774s0324 I 0.880
Eucgr.F04119 Eucalyptus grandis Eucgr.F04119 I 0.879
evm.TU.supercontig_4.181 Carica papaya evm.TU.supercontig_4.181 I 0.878
Solyc06g035490.2 Solanum lycopersicum Solyc06g035490.2 I 0.869
LjSGA_023375.1 Lotus japonicus LjSGA_023375.1 I 0.868
Pm019419 Prunus mume Pm019419 I 0.868
Thhalv10026341m.g Eutrema salsugineum Thhalv10026341m.g I 0.860
Bo7g110280 Brassica oleracea Bo7g110280 I 0.860
fgenesh2_kg.8__1059__AT5G51780.1 Arabidopsis lyrata fgenesh2_kg.8__1059__AT5G51780.1 I 0.860
AT5G51780 Arabidopsis thaliana AT5G51780 I 0.860
Ca_22233 Cicer arietinum Ca_22233 I 0.857
PK15358.1 Cannabis sativa PK15358.1 I 0.857
Ciclev10006628m.g Citrus clementina Ciclev10006628m.g I 0.856
orange1.1g036406m.g Citrus sinensis orange1.1g036406m.g I 0.856
cassava21379.m1 Manihot esculenta cassava21379.m1 I 0.856
TCM_016134 Theobroma cacao TCM_016134 I 0.852
TCM_016133 Theobroma cacao TCM_016133 I 0.852
VIT_16s0022g02240 Vitis vinifera VIT_16s0022g02240 N 0.852
Carubv10027158m.g Capsella rubella Carubv10027158m.g N 0.850
Thhalv10014694m.g Eutrema salsugineum Thhalv10014694m.g N 0.850
Cagra.0277s0022 Capsella grandiflora Cagra.0277s0022 N 0.850
AT5G51790 Arabidopsis thaliana AT5G51790 N 0.850
MDP0000246258 Malus domestica MDP0000246258 I 0.848
Thhalv10027549m.g Eutrema salsugineum Thhalv10027549m.g N 0.847
BHLH126 Arabidopsis thaliana AT4G25410 N 0.847
Thhalv10009922m.g Eutrema salsugineum Thhalv10009922m.g I 0.847
Bo1g040100 Brassica oleracea Bo1g040100 N 0.847
Bostr.7867s0350 Boechera stricta Bostr.7867s0350 N 0.847
Cagra.2248s0017 Capsella grandiflora Cagra.2248s0017 N 0.847
Bra019167 Brassica rapa Bra019167 I 0.847
Carubv10006739m.g Capsella rubella Carubv10006739m.g N 0.847
fgenesh1_pg.C_scaffold_7001417 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7001417 N 0.847
cassava21380.m1 Manihot esculenta cassava21380.m1 N 0.846
evm.TU.supercontig_4.179 Carica papaya evm.TU.supercontig_4.179 N 0.845
GLYMA09G27630 Glycine max GLYMA09G27630 N 0.845
MTR_0007s0380 Medicago truncatula MTR_0007s0380 N 0.845
30147.m014147 Ricinus communis 30147.m014147 N 0.844
MTR_1g102370 Medicago truncatula MTR_1g102370 N 0.844
gene32346-v1.0-hybrid Fragaria vesca gene32346-v1.0-hybrid N 0.841
Cucsa.251220 Cucumis sativus Cucsa.251220 N 0.838