CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA08G01810
(
Glycine max
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GLYMA08G01810
T039586_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK03576.1
M01119_2.00
Cannabis sativa
NCACGTGCN
NGCACGTGN
PBM
Lambert et al.(2019)
pTH10095
0.839
0.694
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA08G01810.1
bHLH
430
478
GMNHVMSERRRRAKLNERFLTLRSMVPSISKDDKVSILDDAIDYLKKLE
Links
Other
bHLH
family TFs
Other
Glycine max
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjSGA_008146.1
Lotus japonicus
LjSGA_008146.1
I
0.914
MTR_8g098275
Medicago truncatula
MTR_8g098275
I
0.914
Ca_05750
Cicer arietinum
Ca_05750
I
0.914
GLYMA05G37770
Glycine max
GLYMA05G37770
N
0.894
Pm023805
Prunus mume
Pm023805
I
0.890
gene32494-v1.0-hybrid
Fragaria vesca
gene32494-v1.0-hybrid
I
0.890
PRUPE_ppa002762mg
Prunus persica
PRUPE_ppa002762mg
I
0.890
Bra025508
Brassica rapa
Bra025508
I
0.875
GL3
Arabidopsis thaliana
AT5G41315
I
0.875
Carubv10004345m.g
Capsella rubella
Carubv10004345m.g
I
0.875
GL3
Arabidopsis lyrata
fgenesh2_kg.7__3280__AT5G41315.1
I
0.875
Thhalv10027709m.g
Eutrema salsugineum
Thhalv10027709m.g
I
0.875
Bo4g141990
Brassica oleracea
Bo4g141990
I
0.875
Bostr.7200s0145
Boechera stricta
Bostr.7200s0145
I
0.875
TCM_016261
Theobroma cacao
TCM_016261
I
0.865
POPTR_0003s12810
Populus trichocarpa
POPTR_0003s12810
I
0.857
cassava8594.m1
Manihot esculenta
cassava8594.m1
I
0.856
mgf005803m
Mimulus guttatus
mgf005803m
I
0.855
EGL3
Arabidopsis lyrata
fgenesh2_kg.2__120__AT1G63650.2
N
0.851
BHLH2
Arabidopsis thaliana
AT1G63650
N
0.851
Cagra.2104s0007
Capsella grandiflora
Cagra.2104s0007
N
0.851
Bostr.29223s0199
Boechera stricta
Bostr.29223s0199
N
0.851
Carubv10019965m.g
Capsella rubella
Carubv10019965m.g
N
0.851
PK03576.1
Cannabis sativa
PK03576.1
D
0.839