Bo4g141990 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo4g141990 T031171_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK03576.1
M01119_2.00 		Cannabis sativa
NCACGTGCN
NGCACGTGN		 PBM
Lambert et al.(2019)
pTH10095 		0.861 0.633
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo4g141990.1 bHLH 301 350

Links

Other bHLH family TFs
Other Brassica oleracea TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra025508 Brassica rapa Bra025508 I 0.914
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.901
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.901
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.901
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.901
GL3 Arabidopsis thaliana AT5G41315 I 0.901
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.899
Pm023805 Prunus mume Pm023805 I 0.899
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.899
TCM_016261 Theobroma cacao TCM_016261 I 0.886
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.879
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.878
mgf005803m Mimulus guttatus mgf005803m I 0.877
BHLH2 Arabidopsis thaliana AT1G63650 N 0.877
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.877
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.877
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.877
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.877
Ca_05750 Cicer arietinum Ca_05750 I 0.875
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.875
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.875
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.875
PK03576.1 Cannabis sativa PK03576.1 D 0.861
BHLH127 Arabidopsis thaliana AT4G28815 N 0.859
Bra027653 Brassica rapa Bra027653 N 0.857
Thhalv10023356m.g Eutrema salsugineum Thhalv10023356m.g N 0.857
Bra027796 Brassica rapa Bra027796 N 0.857
Bo9g029230 Brassica oleracea Bo9g029230 N 0.857
Gorai.007G023500 Gossypium raimondii Gorai.007G023500 N 0.856
GLYMA05G37770 Glycine max GLYMA05G37770 N 0.855
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N 0.854
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.851
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.849
Bra037887 Brassica rapa Bra037887 N 0.845
Bo9g086920 Brassica oleracea Bo9g086920 N 0.845
Bo9g086910 Brassica oleracea Bo9g086910 N 0.845
TT8 Arabidopsis lyrata fgenesh2_kg.6__2968__AT4G09820.1 I 0.842
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I 0.842
Carubv10002462m.g Capsella rubella Carubv10002462m.g I 0.842
TT8 Arabidopsis thaliana AT4G09820 I 0.842
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I 0.842
evm.TU.supercontig_537.2 Carica papaya evm.TU.supercontig_537.2 N 0.840
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.840
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.838