TCM_016261 (Theobroma cacao)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 TCM_016261 T045381_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK03576.1
M01119_2.00 		Cannabis sativa
NCACGTGCN
NGCACGTGN		 PBM
Lambert et al.(2019)
pTH10095 		0.850 0.653
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY24749 bHLH 442 490
EOY24750 bHLH 442 490
EOY24751 bHLH 416 464
EOY24752 bHLH 323 371
EOY24753 bHLH 323 371
EOY24754 bHLH 258 306
EOY24755 bHLH 442 491

Links

Other bHLH family TFs
Other Theobroma cacao TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.889
Pm023805 Prunus mume Pm023805 I 0.889
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.889
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.886
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.886
Bo4g141990 Brassica oleracea Bo4g141990 I 0.886
GL3 Arabidopsis thaliana AT5G41315 I 0.886
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.886
Bra025508 Brassica rapa Bra025508 I 0.886
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.886
mgf005803m Mimulus guttatus mgf005803m I 0.879
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.868
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.867
Ca_05750 Cicer arietinum Ca_05750 I 0.865
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.865
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.865
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.865
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.862
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.862
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.862
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.862
BHLH2 Arabidopsis thaliana AT1G63650 N 0.862
Gorai.007G023500 Gossypium raimondii Gorai.007G023500 N 0.858
cassava36456.valid.m1 Manihot esculenta cassava36456.valid.m1 I 0.852
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.851
PK03576.1 Cannabis sativa PK03576.1 D 0.850
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N 0.844
GLYMA05G37770 Glycine max GLYMA05G37770 N 0.844
Bo9g029230 Brassica oleracea Bo9g029230 N 0.842
Bra027653 Brassica rapa Bra027653 N 0.842
Thhalv10023356m.g Eutrema salsugineum Thhalv10023356m.g N 0.842
Bra027796 Brassica rapa Bra027796 N 0.842
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.840