SNAPOd2T00001991001 (Oikopleura dioica)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 SNAPOd2T00001991001 T051731_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Clock
M01735_2.00 		Mus musculus
NNCAYRTGNN
NNCAYRTGNN		 PBM
Weirauch et al.(2014)
pTH5056 		0.838 0.667
CLOCK
M02789_2.00 		Homo sapiens
DACACGTGYH
DRCACGTGTH		 SELEX
Jolma et al.(2013)
CLOCK_1 		0.838 0.667
CLOCK
M04129_2.00 		Homo sapiens
NMCACGTGYN
NRCACGTGKN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_HT-SELEX 		0.838 0.667
CLOCK
M08728_2.00 		Homo sapiens
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_HUMAN.H11MO.0.C 		0.838 0.667
Clock
M08760_2.00 		Mus musculus
DBBBCAYKTGNNHB
VDNNCAMRTGVVVH		 Misc
Kulakovskiy et al.(2013)
CLOCK_MOUSE.H11MO.0.C 		0.838 0.667
Clock
M09473_2.00 		Mus musculus
CACGTGNN
NNCACGTG		 Misc
Heinz et al.(2010)
Liver-Clock_GSE39860 		0.838 0.667
CLOCK
M09849_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CLOCK_Q6 		0.838 0.667
CLOCK
M04130_2.00 		Homo sapiens
NRCRCRTGBH
DVCAYGYGYN		 SELEX
Yin et al.(2017)
CLOCK_eDBD_Methyl-HT-SELEX 		0.838 0.667
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00001991001 bHLH 48 98

Links

Other bHLH family TFs
Other Oikopleura dioica TFs

76 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
clockb Danio rerio ENSDARG00000003631 I 0.870
clock Xenopus tropicalis XB-GENE-495448 I 0.846
clock.L Xenopus laevis XB-GENE-6254406 I 0.846
ENSSHAG00000005555 Sarcophilus harrisii ENSSHAG00000005555 I 0.838
CLOCK Sorex araneus ENSSARG00000002584 I 0.838
CLOCK Sus scrofa ENSSSCG00000008909 I 0.838
CLOCK Tupaia belangeri ENSTBEG00000002540 I 0.838
clocka Tetraodon nigroviridis ENSTNIG00000004102 I 0.838
ENSTGUG00000007495 Taeniopygia guttata ENSTGUG00000007495 I 0.838
Clock Rattus norvegicus ENSRNOG00000002175 I 0.838
ENSSTOG00000016179 Ictidomys tridecemlineatus ENSSTOG00000016179 I 0.838
CLOCK Pan troglodytes ENSPTRG00000016072 I 0.838
ENSPFOG00000015083 Poecilia formosa ENSPFOG00000015083 I 0.838
CLOCK Procavia capensis ENSPCAG00000001407 I 0.838
ENSPANG00000006882 Papio anubis ENSPANG00000006882 I 0.838
ENSPFOG00000017215 Poecilia formosa ENSPFOG00000017215 I 0.838
ENSPPYG00000014762 Pongo abelii ENSPPYG00000014762 I 0.838
clockb Tetraodon nigroviridis ENSTNIG00000017652 I 0.838
ENSPSIG00000011404 Pelodiscus sinensis ENSPSIG00000011404 I 0.838
CLOCK Pteropus vampyrus ENSPVAG00000008960 I 0.838
ENSTSYG00000003546 Tarsius syrichta ENSTSYG00000003546 I 0.838
Gfo_R010434 Geospiza fortis Gfo_R010434 I 0.838
ENSP00000370723-D1 Bos grunniens ENSP00000370723-D1 I 0.838
ENSMMUP00000002568 Macaca fascicularis ENSMMUP00000002568 I 0.838
Myotis_brandtii_Clock_10026771 Myotis brandtii Myotis_brandtii_Clock_10026771 I 0.838
Ogr11799 Ophisaurus gracilis Ogr11799 I 0.838
Tal_R002573 Tyto alba Tal_R002573 I 0.838
Pvit_07605 Pogona vitticeps Pvit_07605 I 0.838
Brh_R001802 Buceros rhinoceros Brh_R001802 I 0.838
Afo_R013414 Aptenodytes forsteri Afo_R013414 I 0.838
CLOCK Tursiops truncatus ENSTTRG00000000960 I 0.838
clocka Oryzias latipes ENSORLG00000004495 I 0.838
clockb Takifugu rubripes ENSTRUG00000015488 I 0.838
CLOCK Vicugna pacos ENSVPAG00000006438 I 0.838
ENSXMAG00000016928 Xiphophorus maculatus ENSXMAG00000016928 I 0.838
Aan_R004160 Calypte anna Aan_R004160 I 0.838
ENSXMAG00000017672 Xiphophorus maculatus ENSXMAG00000017672 I 0.838
clocka Takifugu rubripes ENSTRUG00000001837 I 0.838
ENSONIG00000008797 Oreochromis niloticus ENSONIG00000008797 I 0.838
CLOCK Equus caballus ENSECAG00000006331 I 0.838
CLOCK Dasypus novemcinctus ENSDNOG00000018101 I 0.838
clocka Danio rerio ENSDARG00000011703 I 0.838
CLOCK Echinops telfairi ENSETEG00000015604 I 0.838
ENSFALG00000003646 Ficedula albicollis ENSFALG00000003646 I 0.838
clocka Gasterosteus aculeatus ENSGACG00000015939 I 0.838
CLOCK Homo sapiens ENSG00000134852 D 0.838
CLOCK Felis catus ENSFCAG00000001064 I 0.838
ENSCSAG00000005019 Chlorocebus sabaeus ENSCSAG00000005019 I 0.838
CLOCK Cavia porcellus ENSCPOG00000011807 I 0.838
ENSAMXG00000021792 Astyanax mexicanus ENSAMXG00000021792 I 0.838
ENSAMXG00000005565 Astyanax mexicanus ENSAMXG00000005565 I 0.838
ENSAMEG00000018420 Ailuropoda melanoleuca ENSAMEG00000018420 I 0.838
ENSAPLG00000007176 Anas platyrhynchos ENSAPLG00000007176 I 0.838
CLOCK Bos taurus ENSBTAG00000044044 I 0.838
CLOCK Callithrix jacchus ENSCJAG00000018261 I 0.838
CLOCK Canis familiaris ENSCAFG00000002140 I 0.838
CLOCK Gallus gallus ENSGALG00000013793 I 0.838
CLOCK Gorilla gorilla ENSGGOG00000005753 I 0.838
ENSNLEG00000008499 Nomascus leucogenys ENSNLEG00000008499 I 0.838
Clock Mus musculus ENSMUSG00000029238 D 0.838
ENSMPUG00000005091 Mustela putorius furo ENSMPUG00000005091 I 0.838
ENSOARG00000001602 Ovis aries ENSOARG00000001602 I 0.838
CLOCK Oryctolagus cuniculus ENSOCUG00000022350 I 0.838
CLOCK Anolis carolinensis ENSACAG00000009335 I 0.838
ENSONIG00000002943 Oreochromis niloticus ENSONIG00000002943 I 0.838
CLOCK Otolemur garnettii ENSOGAG00000012464 I 0.838
CLOCK Monodelphis domestica ENSMODG00000020678 I 0.838
CLOCK Macaca mulatta ENSMMUG00000001919 I 0.838
CLOCK Loxodonta africana ENSLAFG00000009558 I 0.838
ENSLACG00000013436 Latimeria chalumnae ENSLACG00000013436 I 0.838
ENSGMOG00000004825 Gadus morhua ENSGMOG00000004825 I 0.838
ENSLOCG00000014043 Lepisosteus oculatus ENSLOCG00000014043 I 0.838
ENSMEUG00000005481 Macropus eugenii ENSMEUG00000005481 I 0.838
CLOCK Myotis lucifugus ENSMLUG00000010007 I 0.838
CLOCK Meleagris gallopavo ENSMGAG00000011742 I 0.838
CLOCK Ochotona princeps ENSOPRG00000005292 I 0.838