CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AT5G61470
(
Arabidopsis thaliana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AT5G61470
T080889_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT5G61470.1
C2H2 ZF
228
250
YTCDTCGKVLRSYQALGGHRTSH
AT5G61470.1
C2H2 ZF
274
296
YECQICNRMFASGQALGGHKKIH
Links
Other
C2H2 ZF
family TFs
Other
Arabidopsis thaliana
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.26833s0090
Boechera stricta
Bostr.26833s0090
N
0.788
Bo7g098740
Brassica oleracea
Bo7g098740
N
0.782
Bra012953
Brassica rapa
Bra012953
N
0.782
Bo8g095300
Brassica oleracea
Bo8g095300
I
0.774
Bo6g077190
Brassica oleracea
Bo6g077190
I
0.774
Thhalv10006508m.g
Eutrema salsugineum
Thhalv10006508m.g
I
0.774
Bra014483
Brassica rapa
Bra014483
I
0.774
Bo4g104940
Brassica oleracea
Bo4g104940
I
0.774
Bra003422
Brassica rapa
Bra003422
I
0.774
Bra007545
Brassica rapa
Bra007545
I
0.774
Thhalv10005323m.g
Eutrema salsugineum
Thhalv10005323m.g
N
0.765
BRADI1G14750
Brachypodium distachyon
BRADI1G14750
I
0.759
Cagra.0542s0042
Capsella grandiflora
Cagra.0542s0042
N
0.758
Carubv10028614m.g
Capsella rubella
Carubv10028614m.g
N
0.758