BRADI4G09410 (Brachypodium distachyon)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BRADI4G09410 T082026_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.759 0.674
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.759 0.674
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI4G09410.1 C2H2 ZF 47 69
BRADI4G09410.1 C2H2 ZF 87 109

Links

Other C2H2 ZF family TFs
Other Brachypodium distachyon TFs

226 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4DS_276818E4F Triticum aestivum Traes_4DS_276818E4F I 0.820
F775_14723 Aegilops tauschii F775_14723 I 0.820
GSMUA_Achr11G23970_001 Musa acuminata GSMUA_Achr11G23970_001 I 0.802
Pavir.Ha00193 Panicum virgatum Pavir.Ha00193 I 0.797
Pavir.J14296 Panicum virgatum Pavir.J14296 I 0.792
Lus10040312.g Linum usitatissimum Lus10040312.g I 0.792
Si027432m.g Setaria italica Si027432m.g I 0.791
Pavir.Da00814 Panicum virgatum Pavir.Da00814 I 0.791
GRMZM2G338056 Zea mays GRMZM2G338056 I 0.791
Pavir.Da00815 Panicum virgatum Pavir.Da00815 I 0.791
Pavir.Hb00023 Panicum virgatum Pavir.Hb00023 I 0.791
Pavir.J30713 Panicum virgatum Pavir.J30713 I 0.791
Si026973m.g Setaria italica Si026973m.g I 0.791
Pavir.Da01393 Panicum virgatum Pavir.Da01393 I 0.786
Sb05g027450 Sorghum bicolor Sb05g027450 I 0.786
Pavir.Da01563 Panicum virgatum Pavir.Da01563 I 0.785
ORGLA11G0188100 Oryza glaberrima ORGLA11G0188100 I 0.785
OB11G27860 Oryza brachyantha OB11G27860 I 0.785
BGIOSGA033524 Oryza indica BGIOSGA033524 I 0.785
OBART11G23480 Oryza barthii OBART11G23480 I 0.785
Pavir.Ha00194 Panicum virgatum Pavir.Ha00194 I 0.785
OPUNC11G19830 Oryza punctata OPUNC11G19830 I 0.785
ORUFI11G25330 Oryza rufipogon ORUFI11G25330 I 0.785
Pavir.Hb00056 Panicum virgatum Pavir.Hb00056 I 0.785
Pavir.Hb00003 Panicum virgatum Pavir.Hb00003 I 0.785
OS11G0702400 Oryza sativa OS11G0702400 I 0.785
MLOC_11626 Hordeum vulgare MLOC_11626 N 0.781
MLOC_76196 Hordeum vulgare MLOC_76196 I 0.780
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I 0.779
Traes_5DL_4B4927090 Triticum aestivum Traes_5DL_4B4927090 I 0.778
Si003051m.g Setaria italica Si003051m.g I 0.778
F775_30896 Aegilops tauschii F775_30896 I 0.778
F775_08752 Aegilops tauschii F775_08752 I 0.778
TRIUR3_01060 Triticum urartu TRIUR3_01060 I 0.778
MLOC_14920 Hordeum vulgare MLOC_14920 I 0.778
GRMZM2G112799 Zea mays GRMZM2G112799 I 0.777
LPERR01G31500 Leersia perrieri LPERR01G31500 I 0.777
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I 0.777
GRMZM2G376061 Zea mays GRMZM2G376061 I 0.777
GRMZM2G307402 Zea mays GRMZM2G307402 I 0.777
Pavir.J14338 Panicum virgatum Pavir.J14338 I 0.777
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I 0.777
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I 0.777
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I 0.777
Sb03g039270 Sorghum bicolor Sb03g039270 I 0.777
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I 0.777
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I 0.776
OPUNC01G35440 Oryza punctata OPUNC01G35440 I 0.776
OMERI01G33710 Oryza meridionalis OMERI01G33710 I 0.776
Sb10g031270 Sorghum bicolor Sb10g031270 I 0.776
Pavir.J04850 Panicum virgatum Pavir.J04850 I 0.776
OPUNC01G35470 Oryza punctata OPUNC01G35470 I 0.776
OS01G0839100 Oryza sativa OS01G0839100 I 0.776
Si008395m.g Setaria italica Si008395m.g I 0.776
BGIOSGA004768 Oryza indica BGIOSGA004768 I 0.776
ONIVA01G41740 Oryza nivara ONIVA01G41740 I 0.776
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I 0.776
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I 0.776
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I 0.776
LPERR05G15220 Leersia perrieri LPERR05G15220 I 0.774
Aquca_010_00703 Aquilegia coerulea Aquca_010_00703 I 0.773
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I 0.773
Pavir.Cb00699 Panicum virgatum Pavir.Cb00699 N 0.772
GSMUA_Achr1G01260_001 Musa acuminata GSMUA_Achr1G01260_001 I 0.772
GSMUA_Achr5G29140_001 Musa acuminata GSMUA_Achr5G29140_001 I 0.772
Cucsa.065930 Cucumis sativus Cucsa.065930 I 0.772
GRMZM2G061897 Zea mays GRMZM2G061897 I 0.772
Cla018516 Citrullus lanatus Cla018516 I 0.772
ORGLA01G0304300 Oryza glaberrima ORGLA01G0304300 I 0.769
OMERI01G33680 Oryza meridionalis OMERI01G33680 I 0.769
TRAES3BF117500110CFD_g Triticum aestivum TRAES3BF117500110CFD_g I 0.769
OGLUM01G40470 Oryza glumaepatula OGLUM01G40470 I 0.769
BGIOSGA000523 Oryza indica BGIOSGA000523 I 0.769
ORUFI01G40000 Oryza rufipogon ORUFI01G40000 I 0.769
Sb09g022660 Sorghum bicolor Sb09g022660 I 0.769
AC206217.2_FG006 Zea mays AC206217.2_FG006 I 0.769
LPERR01G31460 Leersia perrieri LPERR01G31460 I 0.769
Pavir.Ea03334 Panicum virgatum Pavir.Ea03334 I 0.769
GRMZM5G804618 Zea mays GRMZM5G804618 I 0.769
Pavir.J32634 Panicum virgatum Pavir.J32634 I 0.769
OS01G0838600 Oryza sativa OS01G0838600 I 0.769
ONIVA01G41600 Oryza nivara ONIVA01G41600 I 0.769
Solyc05g054660.1 Solanum lycopersicum Solyc05g054660.1 I 0.768
Pm018761 Prunus mume Pm018761 I 0.768
VIT_06s0004g04180 Vitis vinifera VIT_06s0004g04180 I 0.768
Traes_4AS_D4763E468 Triticum aestivum Traes_4AS_D4763E468 I 0.768
VIT_13s0019g00480 Vitis vinifera VIT_13s0019g00480 I 0.768
Cla004091 Citrullus lanatus Cla004091 I 0.768
29585.m000611 Ricinus communis 29585.m000611 I 0.768
Pm002762 Prunus mume Pm002762 I 0.768
cassava39064.m1 Manihot esculenta cassava39064.m1 I 0.768
Eucgr.A01233 Eucalyptus grandis Eucgr.A01233 I 0.768
MDP0000237150 Malus domestica MDP0000237150 I 0.768
MDP0000257423 Malus domestica MDP0000257423 I 0.768
orange1.1g040287m.g Citrus sinensis orange1.1g040287m.g I 0.768
MDP0000137826 Malus domestica MDP0000137826 I 0.768
Lus10030330.g Linum usitatissimum Lus10030330.g I 0.768
Gorai.013G023300 Gossypium raimondii Gorai.013G023300 I 0.768
Lus10023433.g Linum usitatissimum Lus10023433.g I 0.768
orange1.1g041414m.g Citrus sinensis orange1.1g041414m.g I 0.768
orange1.1g044181m.g Citrus sinensis orange1.1g044181m.g I 0.768
Thhalv10017303m.g Eutrema salsugineum Thhalv10017303m.g I 0.768
chr5.CM0180.20.nc Lotus japonicus chr5.CM0180.20.nc I 0.768
SapurV1A.0095s0590 Salix purpurea SapurV1A.0095s0590 I 0.768
SapurV1A.0038s0750 Salix purpurea SapurV1A.0038s0750 I 0.768
Pavir.Ia03651 Panicum virgatum Pavir.Ia03651 I 0.768
Pavir.Ib01297 Panicum virgatum Pavir.Ib01297 I 0.768
Gorai.011G254300 Gossypium raimondii Gorai.011G254300 I 0.768
Gorai.011G254200 Gossypium raimondii Gorai.011G254200 I 0.768
Ciclev10032889m.g Citrus clementina Ciclev10032889m.g I 0.768
Ciclev10032899m.g Citrus clementina Ciclev10032899m.g I 0.768
Ciclev10032922m.g Citrus clementina Ciclev10032922m.g I 0.768
Bostr.23794s0343 Boechera stricta Bostr.23794s0343 I 0.768
Aquca_027_00274 Aquilegia coerulea Aquca_027_00274 I 0.768
Cucsa.165460 Cucumis sativus Cucsa.165460 I 0.768
mgf023249m Mimulus guttatus mgf023249m I 0.768
Eucgr.A01231 Eucalyptus grandis Eucgr.A01231 I 0.768
Solyc05g054650.1 Solanum lycopersicum Solyc05g054650.1 I 0.768
gene26659-v1.0-hybrid Fragaria vesca gene26659-v1.0-hybrid I 0.768
Gorai.006G176100 Gossypium raimondii Gorai.006G176100 I 0.768
gene18205-v1.0-hybrid Fragaria vesca gene18205-v1.0-hybrid I 0.768
gene18204-v1.0-hybrid Fragaria vesca gene18204-v1.0-hybrid I 0.768
Eucgr.G02910 Eucalyptus grandis Eucgr.G02910 I 0.768
evm.TU.contig_30912.1 Carica papaya evm.TU.contig_30912.1 I 0.768
cassava9455.m1 Manihot esculenta cassava9455.m1 I 0.768
POPTR_0008s05110 Populus trichocarpa POPTR_0008s05110 I 0.768
LPERR03G11200 Leersia perrieri LPERR03G11200 I 0.768
Si037660m.g Setaria italica Si037660m.g I 0.768
GSMUA_Achr11G24480_001 Musa acuminata GSMUA_Achr11G24480_001 I 0.768
GSMUA_Achr10G13540_001 Musa acuminata GSMUA_Achr10G13540_001 I 0.768
MTR_7g023560 Medicago truncatula MTR_7g023560 I 0.768
OGLUM03G12700 Oryza glumaepatula OGLUM03G12700 I 0.768
ORGLA03G0122200 Oryza glaberrima ORGLA03G0122200 I 0.768
OPUNC03G12220 Oryza punctata OPUNC03G12220 I 0.768
ONIVA01G18540 Oryza nivara ONIVA01G18540 I 0.768
OMERI03G11850 Oryza meridionalis OMERI03G11850 I 0.768
GSMUA_Achr10G03700_001 Musa acuminata GSMUA_Achr10G03700_001 I 0.768
GRMZM2G112251 Zea mays GRMZM2G112251 I 0.768
fgenesh2_kg.4__1796__AT2G37430.1 Arabidopsis lyrata fgenesh2_kg.4__1796__AT2G37430.1 I 0.768
Bra039806 Brassica rapa Bra039806 I 0.768
Bra030981 Brassica rapa Bra030981 I 0.768
BGIOSGA010987 Oryza indica BGIOSGA010987 I 0.768
GLYMA02G10490 Glycine max GLYMA02G10490 I 0.768
GLYMA10G43630 Glycine max GLYMA10G43630 I 0.768
GRMZM2G048154 Zea mays GRMZM2G048154 I 0.768
GLYMA20G23180 Glycine max GLYMA20G23180 I 0.768
GLYMA18G52410 Glycine max GLYMA18G52410 I 0.768
ORUFI03G13310 Oryza rufipogon ORUFI03G13310 I 0.768
GSMUA_Achr6G15360_001 Musa acuminata GSMUA_Achr6G15360_001 I 0.768
PRUPE_ppa011762mg Prunus persica PRUPE_ppa011762mg I 0.768
PGSC0003DMG400023518 Solanum tuberosum PGSC0003DMG400023518 I 0.768
PRUPE_ppa022066mg Prunus persica PRUPE_ppa022066mg I 0.768
PGSC0003DMG400023547 Solanum tuberosum PGSC0003DMG400023547 I 0.768
POPTR_0010s21650 Populus trichocarpa POPTR_0010s21650 I 0.768
OS03G0279700 Oryza sativa OS03G0279700 I 0.768
Bra005197 Brassica rapa Bra005197 I 0.767
Gorai.006G176000 Gossypium raimondii Gorai.006G176000 I 0.767
Gorai.006G104800 Gossypium raimondii Gorai.006G104800 I 0.767
GSMUA_Achr9G03210_001 Musa acuminata GSMUA_Achr9G03210_001 I 0.767
GLYMA10G05190 Glycine max GLYMA10G05190 I 0.767
Bo4g186920 Brassica oleracea Bo4g186920 I 0.767
Gorai.012G006900 Gossypium raimondii Gorai.012G006900 I 0.767
GLYMA19G35740 Glycine max GLYMA19G35740 I 0.767
orange1.1g031966m.g Citrus sinensis orange1.1g031966m.g I 0.767
GLYMA03G33050 Glycine max GLYMA03G33050 I 0.767
Lus10024428.g Linum usitatissimum Lus10024428.g I 0.767
Pavir.Ia00294 Panicum virgatum Pavir.Ia00294 I 0.767
SapurV1A.0008s0970 Salix purpurea SapurV1A.0008s0970 I 0.767
Bra017188 Brassica rapa Bra017188 I 0.767
Pavir.Ib04509 Panicum virgatum Pavir.Ib04509 I 0.767
Bo4g030570 Brassica oleracea Bo4g030570 I 0.767
MTR_1g067640 Medicago truncatula MTR_1g067640 I 0.767
ZAT11 Arabidopsis thaliana AT2G37430 I 0.767
Ca_07663 Cicer arietinum Ca_07663 I 0.767
LjSGA_020980.2 Lotus japonicus LjSGA_020980.2 I 0.767
Carubv10024141m.g Capsella rubella Carubv10024141m.g I 0.767
Cagra.0666s0001 Capsella grandiflora Cagra.0666s0001 I 0.767
Ciclev10013311m.g Citrus clementina Ciclev10013311m.g I 0.767
MTR_1g067650 Medicago truncatula MTR_1g067650 I 0.767
MTR_1g067660 Medicago truncatula MTR_1g067660 I 0.767
28637.m000203 Ricinus communis 28637.m000203 I 0.766
PGSC0003DMG400015533 Solanum tuberosum PGSC0003DMG400015533 I 0.766
GSMUA_AchrUn_randomG07580_001 Musa acuminata GSMUA_AchrUn_randomG07580_001 I 0.766
PGSC0003DMG400015532 Solanum tuberosum PGSC0003DMG400015532 I 0.766
PGSC0003DMG400015534 Solanum tuberosum PGSC0003DMG400015534 I 0.766
PGSC0003DMG400015531 Solanum tuberosum PGSC0003DMG400015531 I 0.766
PGSC0003DMG400039582 Solanum tuberosum PGSC0003DMG400039582 I 0.766
cassava35212.m1 Manihot esculenta cassava35212.m1 I 0.766
PGSC0003DMG400015557 Solanum tuberosum PGSC0003DMG400015557 I 0.766
Bo6g067580 Brassica oleracea Bo6g067580 I 0.765
fgenesh2_kg.5__1736__AT3G53600.1 Arabidopsis lyrata fgenesh2_kg.5__1736__AT3G53600.1 I 0.759
Thhalv10010956m.g Eutrema salsugineum Thhalv10010956m.g I 0.759
Bra003148 Brassica rapa Bra003148 I 0.759
Bo00576s170 Brassica oleracea Bo00576s170 I 0.759
AT3G53600 Arabidopsis thaliana AT3G53600 D 0.759
GRMZM2G002805 Zea mays GRMZM2G002805 I 0.759
Carubv10018114m.g Capsella rubella Carubv10018114m.g I 0.759
Cagra.0612s0086 Capsella grandiflora Cagra.0612s0086 I 0.759
Bostr.11793s0034 Boechera stricta Bostr.11793s0034 I 0.759
TRIUR3_01057 Triticum urartu TRIUR3_01057 N 0.759
GRMZM2G061626 Zea mays GRMZM2G061626 I 0.759
GLYMA03G33060 Glycine max GLYMA03G33060 I 0.758
Eucgr.A01230 Eucalyptus grandis Eucgr.A01230 I 0.758
OB03G22700 Oryza brachyantha OB03G22700 I 0.758
GLYMA03G33070 Glycine max GLYMA03G33070 I 0.758
GLYMA19G35770 Glycine max GLYMA19G35770 I 0.758
LjT09F05.130.nd Lotus japonicus LjT09F05.130.nd I 0.758
GLYMA13G19560 Glycine max GLYMA13G19560 I 0.757
GSMUA_Achr1G03310_001 Musa acuminata GSMUA_Achr1G03310_001 I 0.757
TRIUR3_15912 Triticum urartu TRIUR3_15912 I 0.757
GLYMA13G19570 Glycine max GLYMA13G19570 I 0.757
Traes_5DL_4E890ABF3 Triticum aestivum Traes_5DL_4E890ABF3 I 0.757
F775_18611 Aegilops tauschii F775_18611 I 0.757
F775_30269 Aegilops tauschii F775_30269 I 0.757
F775_52290 Aegilops tauschii F775_52290 I 0.757
Traes_5BL_630A8A142 Triticum aestivum Traes_5BL_630A8A142 I 0.757
Traes_5BL_D53A846BE Triticum aestivum Traes_5BL_D53A846BE I 0.757
Traes_5BL_63AE36D3A Triticum aestivum Traes_5BL_63AE36D3A I 0.757
TCM_022001 Theobroma cacao TCM_022001 I 0.757
Traes_5BL_F74D668D9 Triticum aestivum Traes_5BL_F74D668D9 I 0.757
GLYMA10G05210 Glycine max GLYMA10G05210 I 0.757
cassava8924.m1 Manihot esculenta cassava8924.m1 I 0.756
PGSC0003DMG400030311 Solanum tuberosum PGSC0003DMG400030311 I 0.756
GSMUA_Achr6G34890_001 Musa acuminata GSMUA_Achr6G34890_001 I 0.756
Pavir.J03079 Panicum virgatum Pavir.J03079 I 0.756
MTR_7g100100 Medicago truncatula MTR_7g100100 I 0.756