CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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bcl6ab
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000004563
T104762_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM
KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.802
0.852
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN
NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.802
0.852
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN
NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.802
0.852
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN
NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.802
0.852
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN
NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.802
0.852
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN
NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.792
0.852
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000005736
C2H2 ZF
476
498
YRCDCCQAAFRYKGNLASHKTVH
ENSORLP00000005736
C2H2 ZF
504
526
YHCNICGAQFNRPANLKTHTRIH
ENSORLP00000005736
C2H2 ZF
532
554
YKCETCGSRFVQVAHLRAHVLIH
ENSORLP00000005736
C2H2 ZF
560
582
YPCEICGTHFRHLQTLKSHMRIH
ENSORLP00000005736
C2H2 ZF
588
611
YHCEKCDLHFRHKSQLRLHLRQKH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
bcl6ab
Takifugu rubripes
ENSTRUG00000001788
I
0.815
bcl6ab
Tetraodon nigroviridis
ENSTNIG00000007834
I
0.815
ENSMEUG00000000375
Macropus eugenii
ENSMEUG00000000375
I
0.804
BCL6B
Monodelphis domestica
ENSMODG00000006161
I
0.804
BCL6B
Canis familiaris
ENSCAFG00000015968
I
0.804
ENSPANG00000024201
Papio anubis
ENSPANG00000024201
I
0.802
ENSP00000293805-D1
Bos grunniens
ENSP00000293805-D1
I
0.802
ENSAMEG00000016319
Ailuropoda melanoleuca
ENSAMEG00000016319
I
0.802
ENSNLEG00000009340
Nomascus leucogenys
ENSNLEG00000009340
I
0.802
BCL6B
Procavia capensis
ENSPCAG00000013548
I
0.802
ENSPPYG00000007891
Pongo abelii
ENSPPYG00000007891
I
0.802
BCL6B
Sus scrofa
ENSSSCG00000017927
I
0.802
BCL6B
Tupaia belangeri
ENSTBEG00000005792
I
0.802
BCL6B
Pan troglodytes
ENSPTRG00000008656
I
0.802
BCL6B
Bos taurus
ENSBTAG00000020854
I
0.802
ENSCSAG00000012171
Chlorocebus sabaeus
ENSCSAG00000012171
I
0.802
ENSP00000293805
Macaca fascicularis
ENSP00000293805
I
0.802
BCL6B
Homo sapiens
ENSG00000161940
D
0.802
BCL6B
Equus caballus
ENSECAG00000023771
I
0.802
Bcl6b
Dipodomys ordii
ENSDORG00000005538
I
0.802
Myotis_brandtii_BCL6B_10021005
Myotis brandtii
Myotis_brandtii_BCL6B_10021005
I
0.802
BCL6B
Gorilla gorilla
ENSGGOG00000009787
I
0.802
BCL6B
Loxodonta africana
ENSLAFG00000006642
I
0.802
ENSSTOG00000006365
Ictidomys tridecemlineatus
ENSSTOG00000006365
I
0.802
BCL6B
Macaca mulatta
ENSMMUG00000016268
I
0.802
ENSMLUG00000003564
Myotis lucifugus
ENSMLUG00000003564
I
0.802
ENSMPUG00000010670
Mustela putorius furo
ENSMPUG00000010670
I
0.802
BCL6B
Cavia porcellus
ENSCPOG00000004066
I
0.802
ENSSHAG00000000166
Sarcophilus harrisii
ENSSHAG00000000166
I
0.801
ENSOARG00000009610
Ovis aries
ENSOARG00000009610
I
0.800
BCL6B
Otolemur garnettii
ENSOGAG00000027908
I
0.799
BCL6B
Dasypus novemcinctus
ENSDNOG00000035586
I
0.798
BCL6B
Ochotona princeps
ENSOPRG00000006070
I
0.792
Bcl6b
Mus musculus
ENSMUSG00000000317
D
0.792
ENSPSIG00000013071
Pelodiscus sinensis
ENSPSIG00000013071
I
0.790
Bcl6b
Rattus norvegicus
ENSRNOG00000059956
I
0.790
BCL6B
Tursiops truncatus
ENSTTRG00000003982
I
0.787
Alligator_sinensis_CCG005035.1
Alligator sinensis
Alligator_sinensis_CCG005035.1
I
0.776