bcl6ab (Oryzias latipes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSORLG00000004563 T104762_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
BCL6B
M02896_2.00
Homo sapiens
TGCTTTCTAGGAATTMM

KKAATTCCTAGAAAGCA
SELEX
Jolma et al.(2013)
BCL6B_1
0.802 0.852
BCL6B
M04499_2.00
Homo sapiens
NNGCTTTCKAGGAAHN

NDTTCCTMGAAAGCNN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_1
0.802 0.852
BCL6B
M04500_2.00
Homo sapiens
NDTTCCTCGATTRCVN

NBGYAATCGAGGAAHN
SELEX
Yin et al.(2017)
BCL6B_eDBD_HT-SELEX_2
0.802 0.852
BCL6B
M04501_2.00
Homo sapiens
NHGCTTTCTAGGAAHN

NDTTCCTAGAAAGCDN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_1
0.802 0.852
BCL6B
M04502_2.00
Homo sapiens
NWTTCCTAGATTACRN

NYGTAATCTAGGAAWN
SELEX
Yin et al.(2017)
BCL6B_eDBD_Methyl-HT-SELEX_2
0.802 0.852
Bcl6b
M00128_2.00
Mus musculus
NYYYTYCYWNNN

NNNWRGRARRRN
PBM
Badis et al.(2009)
Bcl6b_0961
0.792 0.852
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000005736 C2H2 ZF 476 498
ENSORLP00000005736 C2H2 ZF 504 526
ENSORLP00000005736 C2H2 ZF 532 554
ENSORLP00000005736 C2H2 ZF 560 582
ENSORLP00000005736 C2H2 ZF 588 611

Links

Other C2H2 ZF family TFs
Other Oryzias latipes TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
bcl6ab Takifugu rubripes ENSTRUG00000001788 I 0.815
bcl6ab Tetraodon nigroviridis ENSTNIG00000007834 I 0.815
ENSMEUG00000000375 Macropus eugenii ENSMEUG00000000375 I 0.804
BCL6B Monodelphis domestica ENSMODG00000006161 I 0.804
BCL6B Canis familiaris ENSCAFG00000015968 I 0.804
ENSPANG00000024201 Papio anubis ENSPANG00000024201 I 0.802
ENSP00000293805-D1 Bos grunniens ENSP00000293805-D1 I 0.802
ENSAMEG00000016319 Ailuropoda melanoleuca ENSAMEG00000016319 I 0.802
ENSNLEG00000009340 Nomascus leucogenys ENSNLEG00000009340 I 0.802
BCL6B Procavia capensis ENSPCAG00000013548 I 0.802
ENSPPYG00000007891 Pongo abelii ENSPPYG00000007891 I 0.802
BCL6B Sus scrofa ENSSSCG00000017927 I 0.802
BCL6B Tupaia belangeri ENSTBEG00000005792 I 0.802
BCL6B Pan troglodytes ENSPTRG00000008656 I 0.802
BCL6B Bos taurus ENSBTAG00000020854 I 0.802
ENSCSAG00000012171 Chlorocebus sabaeus ENSCSAG00000012171 I 0.802
ENSP00000293805 Macaca fascicularis ENSP00000293805 I 0.802
BCL6B Homo sapiens ENSG00000161940 D 0.802
BCL6B Equus caballus ENSECAG00000023771 I 0.802
Bcl6b Dipodomys ordii ENSDORG00000005538 I 0.802
Myotis_brandtii_BCL6B_10021005 Myotis brandtii Myotis_brandtii_BCL6B_10021005 I 0.802
BCL6B Gorilla gorilla ENSGGOG00000009787 I 0.802
BCL6B Loxodonta africana ENSLAFG00000006642 I 0.802
ENSSTOG00000006365 Ictidomys tridecemlineatus ENSSTOG00000006365 I 0.802
BCL6B Macaca mulatta ENSMMUG00000016268 I 0.802
ENSMLUG00000003564 Myotis lucifugus ENSMLUG00000003564 I 0.802
ENSMPUG00000010670 Mustela putorius furo ENSMPUG00000010670 I 0.802
BCL6B Cavia porcellus ENSCPOG00000004066 I 0.802
ENSSHAG00000000166 Sarcophilus harrisii ENSSHAG00000000166 I 0.801
ENSOARG00000009610 Ovis aries ENSOARG00000009610 I 0.800
BCL6B Otolemur garnettii ENSOGAG00000027908 I 0.799
BCL6B Dasypus novemcinctus ENSDNOG00000035586 I 0.798
BCL6B Ochotona princeps ENSOPRG00000006070 I 0.792
Bcl6b Mus musculus ENSMUSG00000000317 D 0.792
ENSPSIG00000013071 Pelodiscus sinensis ENSPSIG00000013071 I 0.790
Bcl6b Rattus norvegicus ENSRNOG00000059956 I 0.790
BCL6B Tursiops truncatus ENSTTRG00000003982 I 0.787
Alligator_sinensis_CCG005035.1 Alligator sinensis Alligator_sinensis_CCG005035.1 I 0.776