Cflo_02188--XP_001120905.1_APIME (Camponotus floridanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Cflo_02188--XP_001120905.1_APIME T133761_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.806 0.955
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.806 0.955
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.806 0.955
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.806 0.955
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.806 0.955
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.806 0.955
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.806 0.955
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.785 0.883
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.785 0.883
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.785 0.883
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.785 0.883
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 3 25
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 31 53
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 59 81
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 87 109
Cflo_02188--XP_001120905.1_APIME C2H2 ZF 115 133

Links

Other C2H2 ZF family TFs
Other Camponotus floridanus TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NV12185 Nasonia vitripennis NV12185 I 0.815
SINV17987 Solenopsis invicta SINV17987 I 0.815
GB49914 Apis mellifera GB49914 I 0.815
AAEL007453 Aedes aegypti AAEL007453 I 0.813
AFAF004720 Anopheles farauti AFAF004720 I 0.811
CPIJ010652 Culex quinquefasciatus CPIJ010652 I 0.811
AEPI004813 Anopheles epiroticus AEPI004813 I 0.811
ACOM030727 Anopheles coluzzii ACOM030727 I 0.811
CpipJ_CPIJ010652 Culex pipiens CpipJ_CPIJ010652 I 0.811
AFUN006320 Anopheles funestus AFUN006320 I 0.811
AATE001257 Anopheles atroparvus AATE001257 I 0.811
ODR1 Anopheles gambiae AGAP007973 I 0.811
AMIN006295 Anopheles minimus AMIN006295 I 0.811
ASTEI01738 Anopheles stephensi ASTEI01738 I 0.811
AMEC005957 Anopheles melas AMEC005957 I 0.811
AMEM017192 Anopheles merus AMEM017192 I 0.811
PHUM125080 Pediculus humanus PHUM125080 I 0.808
ACYPI008391 Acyrthosiphon pisum ACYPI008391 I 0.808
ACEP20577 Atta cephalotes ACEP20577 I 0.807
GI17769 Drosophila mojavensis FBgn0140510 I 0.806
GI23940 Drosophila mojavensis FBgn0146665 I 0.806
GL18676 Drosophila persimilis FBgn0156277 I 0.806
GL19470 Drosophila persimilis FBgn0157069 I 0.806
GH13710 Drosophila grimshawi FBgn0121186 I 0.806
GG24967 Drosophila erecta FBgn0117096 I 0.806
GF15254 Drosophila ananassae FBgn0092279 I 0.806
bowl Drosophila melanogaster FBgn0004893 D 0.806
GG24427 Drosophila erecta FBgn0116559 I 0.806
GA10014 Drosophila pseudoobscura FBgn0070073 I 0.806
GA25976 Drosophila pseudoobscura FBgn0247353 I 0.806
GE18258 Drosophila yakuba FBgn0235686 I 0.806
sob Drosophila melanogaster FBgn0004892 D 0.806
MDOA005526 Musca domestica MDOA005526 I 0.806
LCUP002070 Lucilia cuprina LCUP002070 I 0.806
GE14841 Drosophila yakuba FBgn0232433 I 0.806
GK15478 Drosophila willistoni FBgn0217483 I 0.806
GD23254 Drosophila simulans FBgn0194642 I 0.806
GJ17594 Drosophila virilis FBgn0204764 I 0.806
GJ21213 Drosophila virilis FBgn0208346 I 0.806
GK14650 Drosophila willistoni FBgn0216656 I 0.806
GM18435 Drosophila sechellia FBgn0173342 I 0.806
GM18136 Drosophila sechellia FBgn0173043 I 0.806
ODR2 Anopheles gambiae AGAP008222 I 0.806
AAEL008961 Aedes aegypti AAEL008961 I 0.806
GB49901 Apis mellifera GB49901 I 0.804
KGM_20290 Danaus plexippus KGM_20290 I 0.804
TC005784 Tribolium castaneum TC005784 I 0.804
MCINX006060 Melitaea cinxia MCINX006060 I 0.804
Cflo_02191--XP_393879.3_APIME Camponotus floridanus Cflo_02191--XP_393879.3_APIME I 0.804
L798_02536 Zootermopsis nevadensis L798_02536 I 0.804
PHUM445550 Pediculus humanus PHUM445550 I 0.804
SINV18115 Solenopsis invicta SINV18115 I 0.804
GF14663 Drosophila ananassae FBgn0091690 I 0.804
ACEP20581 Atta cephalotes ACEP20581 I 0.804
GH13192 Drosophila grimshawi FBgn0120669 I 0.804
ACYPI007518 Acyrthosiphon pisum ACYPI007518 I 0.803
GD22744 Drosophila simulans FBgn0194140 I 0.803
ADAC005347 Anopheles darlingi ADAC005347 I 0.803
TC005788 Tribolium castaneum TC005788 I 0.803
YQE_05719 Dendroctonus ponderosae YQE_05719 I 0.801
LCUP002077 Lucilia cuprina LCUP002077 I 0.801
MDOA011451 Musca domestica MDOA011451 I 0.801
DAPPUDRAFT_238529 Daphnia pulex DAPPUDRAFT_238529 I 0.801
DAPPUDRAFT_347540 Daphnia pulex DAPPUDRAFT_347540 I 0.801
NV12189 Nasonia vitripennis NV12189 I 0.801
ISCW005884 Ixodes scapularis ISCW005884 I 0.799
ISCW017921 Ixodes scapularis ISCW017921 I 0.799
fgenesh2_pg.scaffold_160000107 Branchiostoma floridae fgenesh2_pg.scaffold_160000107 I 0.799
estExt_fgenesh2_pg.C_1600113 Branchiostoma floridae estExt_fgenesh2_pg.C_1600113 I 0.799
estExt_fgenesh2_pg.C_1600105 Branchiostoma floridae estExt_fgenesh2_pg.C_1600105 I 0.799
fgenesh2_pg.scaffold_160000114 Branchiostoma floridae fgenesh2_pg.scaffold_160000114 I 0.799
ADAC010373 Anopheles darlingi ADAC010373 I 0.798
SMAR005255 Strigamia maritima SMAR005255 I 0.794
L798_02529 Zootermopsis nevadensis L798_02529 I 0.792
PHUM125070 Pediculus humanus PHUM125070 I 0.791
ENSAMEG00000000519 Ailuropoda melanoleuca ENSAMEG00000000519 I 0.785
OSR2 Ochotona princeps ENSOPRG00000005325 I 0.785
XP_002934454 Xenopus tropicalis XP_002934454 I 0.785
ENSONIG00000006859 Oreochromis niloticus ENSONIG00000006859 I 0.785
OSR2 Tursiops truncatus ENSTTRG00000007477 I 0.785
OSR2 Canis familiaris ENSCAFG00000000493 I 0.785
osr2 Oryzias latipes ENSORLG00000002797 I 0.785
OSR2 Procavia capensis ENSPCAG00000003419 I 0.785
osr2 Takifugu rubripes ENSTRUG00000011070 I 0.785
ENSTSYG00000013426 Tarsius syrichta ENSTSYG00000013426 I 0.785
ENSSHAG00000007793 Sarcophilus harrisii ENSSHAG00000007793 I 0.785
OSR2 Pteropus vampyrus ENSPVAG00000004363 I 0.785
ENSPPYG00000018781 Pongo abelii ENSPPYG00000018781 I 0.785
OSR2 Pan troglodytes ENSPTRG00000020463 I 0.785
ENSOARG00000002902 Ovis aries ENSOARG00000002902 I 0.785
OSR2 Otolemur garnettii ENSOGAG00000007928 I 0.785
ENSFALG00000005731 Ficedula albicollis ENSFALG00000005731 I 0.785
ENSNLEG00000002725 Nomascus leucogenys ENSNLEG00000002725 I 0.785
OSR2 Erinaceus europaeus ENSEEUG00000008304 I 0.785
OSR2 Callithrix jacchus ENSCJAG00000015627 I 0.785
Osr2 Dipodomys ordii ENSDORG00000011823 I 0.785
OSR2 Equus caballus ENSECAG00000017784 I 0.785
ENSGALG00000016016 Gallus gallus ENSGALG00000016016 I 0.785
OSR2 Homo sapiens ENSG00000164920 D 0.785
ENSMMUP00000029201 Macaca fascicularis ENSMMUP00000029201 I 0.785
OSR2 Macaca mulatta ENSMMUG00000022185 I 0.785
OSR2 Gorilla gorilla ENSGGOG00000006716 I 0.785
OSR2 Microcebus murinus ENSMICG00000004390 I 0.785
SMAR002904 Strigamia maritima SMAR002904 I 0.784
SPU_024877 Strongylocentrotus purpuratus SPU_024877 I 0.783
Sakowv30016612m.g Saccoglossus kowalevskii Sakowv30016612m.g I 0.783
tetur09g03230 Tetranychus urticae tetur09g03230 I 0.782
D917_07818 Trichinella nativa D917_07818 I 0.758
D917_03163 Trichinella nativa D917_03163 I 0.758
EFV49300 Trichinella spiralis EFV49300 I 0.758