DME_0000423301 (Dracunculus medinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 DME_0000423301 T153138_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
sptf-3
M00632_2.00 		Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN		 PBM
Narasimhan et al.(2015)
pTH9394 		0.784 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
DME_0000423301-mRNA-1 C2H2 ZF 176 198
DME_0000423301-mRNA-1 C2H2 ZF 204 228
DME_0000423301-mRNA-1 C2H2 ZF 234 256

Links

Other C2H2 ZF family TFs
Other Dracunculus medinensis TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0001129301 Anisakis simplex ASIM_0001129301 I 0.804
CBG20386 Caenorhabditis briggsae CBG20386 I 0.800
ACOC_0001203801 Angiostrongylus costaricensis ACOC_0001203801 I 0.791
HCOI00688600 Haemonchus contortus HCOI00688600 I 0.791
DICVIV_09031 Dictyocaulus viviparus DICVIV_09031 I 0.791
ANCCAN_00594 Ancylostoma caninum ANCCAN_00594 I 0.791
ANCDUO_10264 Ancylostoma duodenale ANCDUO_10264 I 0.791
BXY_0564300 Bursaphelenchus xylophilus BXY_0564300 I 0.791
HPLM_0000529101 Haemonchus placei HPLM_0000529101 I 0.791
ANCCEY_05940 Ancylostoma ceylanicum ANCCEY_05940 I 0.791
HPBE_0001438901 Heligmosomoides bakeri HPBE_0001438901 I 0.791
NECAME_13378 Necator americanus NECAME_13378 I 0.791
EVEC_0000041101 Enterobius vermicularis EVEC_0000041101 I 0.788
GPUH_0001030801 Gongylonema pulchrum GPUH_0001030801 I 0.788
SMUV_0000007001 Syphacia muris SMUV_0000007001 I 0.788
ALUE_0000441701 Ascaris lumbricoides ALUE_0000441701 I 0.788
ASU_13052 Ascaris suum ASU_13052 I 0.788
NBR_0001206901 Nippostrongylus brasiliensis NBR_0001206901 I 0.788
EEL_0000517301 Elaeophora elaphi EEL_0000517301 I 0.787
nLs.2.1.2.g07946 Litomosoides sigmodontis nLs.2.1.2.g07946 I 0.787
nAv.1.0.1.g06936 Acanthocheilonema viteae nAv.1.0.1.g06936 I 0.787
nDi.2.2.2.g02202 Dirofilaria immitis nDi.2.2.2.g02202 I 0.787
MhA1_Contig599.frz3.gene7 Meloidogyne hapla MhA1_Contig599.frz3.gene7 I 0.787
nOo.2.0.1.g09582 Onchocerca ochengi nOo.2.0.1.g09582 I 0.787
BTMF_0000199301 Brugia timori BTMF_0000199301 I 0.787
WBGene00237583 Onchocerca volvulus WBGene00237583 I 0.787
Bm6499 Brugia malayi Bm6499 I 0.787
LOAG_01580 Loa loa LOAG_01580 I 0.787
sptf-3 Caenorhabditis elegans WBGene00012735 D 0.784
CRE28577 Caenorhabditis remanei CRE28577 I 0.784
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0 I 0.778
RSKR_0000732400 Rhabditophanes kr3021 RSKR_0000732400 I 0.774
GPLIN_000570600 Globodera pallida GPLIN_000570600 I 0.768
XP_002166590.1 Hydra magnipapillata XP_002166590.1 I 0.766
D917_04158 Trichinella nativa D917_04158 I 0.766
EFV52203 Trichinella spiralis EFV52203 I 0.766
NV18748 Nasonia vitripennis NV18748 I 0.763
ACEP10169 Atta cephalotes ACEP10169 I 0.763
GB41800 Apis mellifera GB41800 I 0.763
nOo.2.0.1.g04030 Onchocerca ochengi nOo.2.0.1.g04030 I 0.757
SBAD_0000755901 Soboliphyme baturini SBAD_0000755901 I 0.757
WBGene00237584 Onchocerca volvulus WBGene00237584 I 0.757
ENSPMAG00000001574 Petromyzon marinus ENSPMAG00000001574 I 0.757