CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BXY_0564300
(
Bursaphelenchus xylophilus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
BXY_0564300
T152455_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sptf-3
M00632_2.00
Caenorhabditis elegans
NNMCGCCCMY
RKGGGCGKNN
PBM
Narasimhan et al.(2015)
pTH9394
0.767
0.855
Sp4
M01862_2.00
Mus musculus
NMCGCCCMY
RKGGGCGKN
PBM
Weirauch et al.(2014)
pTH4998
0.763
0.783
Sp4
M00133_2.00
Mus musculus
HMCGCCCMYN
NRKGGGCGKD
PBM
Badis et al.(2009)
Sp4_1011
0.763
0.783
Sp4
M05859_2.00
Mus musculus
DGNYMCGCCCHNN
NNDGGGCGKRNCH
SMiLE-seq
Isakova et al.(2017)
SP4
0.763
0.783
Sp4
M08975_2.00
Mus musculus
BYHDKCYCCGCCYYYHBSBB
VVSVDRRRGGCGGRGMHDRV
Misc
Kulakovskiy et al.(2013)
SP4_MOUSE.H11MO.0.B
0.763
0.783
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BXY_0564300.1
C2H2 ZF
269
291
HVCHICNKTYGKTSHLRAHLRGH
BXY_0564300.1
C2H2 ZF
297
321
FACDWNMCTKKFTRSDELQRHRRTH
BXY_0564300.1
C2H2 ZF
327
349
FVCTQCSKKFMRSDHLSKHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Bursaphelenchus xylophilus
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RSKR_0000732400
Rhabditophanes kr3021
RSKR_0000732400
I
0.803
DME_0000423301
Dracunculus medinensis
DME_0000423301
I
0.791
ASIM_0001129301
Anisakis simplex
ASIM_0001129301
I
0.787
RSKR_0000732300
Rhabditophanes kr3021
RSKR_0000732300
I
0.783
Aqu1.217456
Amphimedon queenslandica
Aqu1.217456
I
0.779
XP_002166590.1
Hydra magnipapillata
XP_002166590.1
I
0.779
GPUH_0001030801
Gongylonema pulchrum
GPUH_0001030801
I
0.774
MhA1_Contig599.frz3.gene7
Meloidogyne hapla
MhA1_Contig599.frz3.gene7
I
0.774
ALUE_0000441701
Ascaris lumbricoides
ALUE_0000441701
I
0.771
ACOC_0001203801
Angiostrongylus costaricensis
ACOC_0001203801
I
0.771
ANCCAN_00594
Ancylostoma caninum
ANCCAN_00594
I
0.771
ANCDUO_10264
Ancylostoma duodenale
ANCDUO_10264
I
0.771
ANCCEY_05940
Ancylostoma ceylanicum
ANCCEY_05940
I
0.771
DICVIV_09031
Dictyocaulus viviparus
DICVIV_09031
I
0.771
HCOI00688600
Haemonchus contortus
HCOI00688600
I
0.771
NECAME_13378
Necator americanus
NECAME_13378
I
0.771
SMUV_0000007001
Syphacia muris
SMUV_0000007001
I
0.771
NBR_0001206901
Nippostrongylus brasiliensis
NBR_0001206901
I
0.771
HPLM_0000529101
Haemonchus placei
HPLM_0000529101
I
0.771
HPBE_0001438901
Heligmosomoides bakeri
HPBE_0001438901
I
0.771
EVEC_0000041101
Enterobius vermicularis
EVEC_0000041101
I
0.771
ASU_13052
Ascaris suum
ASU_13052
I
0.771
ENSPMAG00000001574
Petromyzon marinus
ENSPMAG00000001574
I
0.770
ENSAMXG00000015260
Astyanax mexicanus
ENSAMXG00000015260
I
0.770
CBG20386
Caenorhabditis briggsae
CBG20386
I
0.767
LOAG_01580
Loa loa
LOAG_01580
I
0.767
nDi.2.2.2.g02202
Dirofilaria immitis
nDi.2.2.2.g02202
I
0.767
nAv.1.0.1.g06936
Acanthocheilonema viteae
nAv.1.0.1.g06936
I
0.767
ENSGACG00000006667
Gasterosteus aculeatus
ENSGACG00000006667
I
0.767
HHAL002953-PA
Halyomorpha halys
HHAL002953-PA
I
0.767
CRE28577
Caenorhabditis remanei
CRE28577
I
0.767
EEL_0000517301
Elaeophora elaphi
EEL_0000517301
I
0.767
BTMF_0000199301
Brugia timori
BTMF_0000199301
I
0.767
WBGene00237583
Onchocerca volvulus
WBGene00237583
I
0.767
Bm6499
Brugia malayi
Bm6499
I
0.767
nOo.2.0.1.g09582
Onchocerca ochengi
nOo.2.0.1.g09582
I
0.767
sptf-3
Caenorhabditis elegans
WBGene00012735
D
0.767
nLs.2.1.2.g07946
Litomosoides sigmodontis
nLs.2.1.2.g07946
I
0.767
sp3a
Danio rerio
ENSDARG00000001549
I
0.766
L596_g19604
Steinernema carpocapsae
L596_g19604
I
0.765
L892_g17070
Steinernema scapterisci
L892_g17070
I
0.765
L893_g2044
Steinernema glaseri
L893_g2044
I
0.765
L889_g32073
Steinernema feltiae
L889_g32073
I
0.765
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf01525-processed-gene-0.0
I
0.765
SBAD_0000755901
Soboliphyme baturini
SBAD_0000755901
I
0.764
sp4
Danio rerio
ENSDARG00000005186
I
0.763
ENSAMXG00000004713
Astyanax mexicanus
ENSAMXG00000004713
I
0.763
Sp4
Mus musculus
ENSMUSG00000025323
D
0.763
NEMVEDRAFT_v1g27142
Nematostella vectensis
NEMVEDRAFT_v1g27142
I
0.763
TriadG7637
Trichoplax adhaerens
TriadG7637
I
0.763
Ocbimv22017043m.g
Octopus bimaculoides
Ocbimv22017043m.g
I
0.763
ISCW020450
Ixodes scapularis
ISCW020450
I
0.763
ENSLACG00000011942
Latimeria chalumnae
ENSLACG00000011942
I
0.763
Sp4
Rattus norvegicus
ENSRNOG00000005472
I
0.763
L898_g7955
Steinernema monticolum
L898_g7955
I
0.761
nRc.2.0.1.g30796
Romanomermis culicivorax
nRc.2.0.1.g30796
I
0.760
SPU_009832
Strongylocentrotus purpuratus
SPU_009832
I
0.760
SPU_009831
Strongylocentrotus purpuratus
SPU_009831
I
0.760
TTRE_0000693001
Trichuris trichiura
TTRE_0000693001
I
0.757
TMUE_s0106000200
Trichuris muris
TMUE_s0106000200
I
0.757
BGLB013141
Biomphalaria glabrata
BGLB013141
I
0.757
LLOJ008095
Lutzomyia longipalpis
LLOJ008095
I
0.757
D918_01017
Trichuris suis
D918_01017
I
0.757