CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc12g035520.1
(
Solanum lycopersicum
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03859 (CG-1)
IPR005559
Solyc12g035520.1
T163384_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc12g035520.1.1
CG-1
14
128
EGRFRWLRPAEVLFILQNHDDRQLAHQPPQKPASGSMFLFNKRVLRYFRKDGHSWRKKKDGRTVGEAHERLKVGNAEALNCYYAHGEKNSNFQRRSYWILDPAYEHIVLVHYRDI
Links
Other
CG-1
family TFs
Other
Solanum lycopersicum
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava42936.valid.m1
Manihot esculenta
cassava42936.valid.m1
N
0.833
orange1.1g044976m.g
Citrus sinensis
orange1.1g044976m.g
N
0.825
Solyc05g015650.2
Solanum lycopersicum
Solyc05g015650.2
N
0.825
Ciclev10030636m.g
Citrus clementina
Ciclev10030636m.g
N
0.825
Gorai.009G332200
Gossypium raimondii
Gorai.009G332200
N
0.816
Pm007031
Prunus mume
Pm007031
N
0.807
PRUPE_ppa000516mg
Prunus persica
PRUPE_ppa000516mg
N
0.807
VIT_01s0010g03850
Vitis vinifera
VIT_01s0010g03850
N
0.798
POPTR_0001s13700
Populus trichocarpa
POPTR_0001s13700
N
0.798
Eucgr.H04623
Eucalyptus grandis
Eucgr.H04623
N
0.798
POPTR_0003s16910
Populus trichocarpa
POPTR_0003s16910
N
0.798
SapurV1A.1460s0040
Salix purpurea
SapurV1A.1460s0040
N
0.789
TCM_008731
Theobroma cacao
TCM_008731
N
0.789
Ca_11361
Cicer arietinum
Ca_11361
N
0.783
SapurV1A.1172s0010
Salix purpurea
SapurV1A.1172s0010
N
0.781
Cucsa.349690
Cucumis sativus
Cucsa.349690
N
0.781
PK06349.1
Cannabis sativa
PK06349.1
N
0.781
MDP0000262800
Malus domestica
MDP0000262800
N
0.772
cassava6546.valid.m1
Manihot esculenta
cassava6546.valid.m1
N
0.772
evm.TU.supercontig_43.77
Carica papaya
evm.TU.supercontig_43.77
N
0.772
Aquca_040_00102
Aquilegia coerulea
Aquca_040_00102
N
0.772
SapurV1A.0056s0050
Salix purpurea
SapurV1A.0056s0050
N
0.772
GLYMA05G28090
Glycine max
GLYMA05G28090
N
0.763
mgf025436m
Mimulus guttatus
mgf025436m
N
0.746
Ca_08511
Cicer arietinum
Ca_08511
N
0.737
Thhalv10018053m.g
Eutrema salsugineum
Thhalv10018053m.g
N
0.728
MTR_8g080800
Medicago truncatula
MTR_8g080800
N
0.728
Gorai.008G089900
Gossypium raimondii
Gorai.008G089900
I
0.720
GLYMA08G11080
Glycine max
GLYMA08G11080
N
0.719
Cagra.1125s0011
Capsella grandiflora
Cagra.1125s0011
N
0.719
fgenesh1_pm.C_scaffold_2000778
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_2000778
N
0.719
SELMODRAFT_28388
Selaginella moellendorffii
SELMODRAFT_28388
I
0.718
SELMODRAFT_18382
Selaginella moellendorffii
SELMODRAFT_18382
I
0.718
Ca_09562
Cicer arietinum
Ca_09562
I
0.714
Bo2g055720
Brassica oleracea
Bo2g055720
N
0.711
Carubv10022369m.g
Capsella rubella
Carubv10022369m.g
N
0.711
POPTR_0010s16290
Populus trichocarpa
POPTR_0010s16290
I
0.705
GLYMA11G36930
Glycine max
GLYMA11G36930
N
0.702
CMTA4
Arabidopsis thaliana
AT1G67310
N
0.702
Traes_4BL_A37F6FD08
Triticum aestivum
Traes_4BL_A37F6FD08
I
0.702
MTR_3g085050
Medicago truncatula
MTR_3g085050
N
0.702
GLYMA18G00840
Glycine max
GLYMA18G00840
N
0.702
Si000282m.g
Setaria italica
Si000282m.g
N
0.702
GSMUA_Achr8G09270_001
Musa acuminata
GSMUA_Achr8G09270_001
N
0.700