Ogr09591 (Ophisaurus gracilis)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) Ogr09591 T174829_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.931 0.931
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.827 0.827
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.780 0.780
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.780 0.780
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.780 0.780
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.740 0.740
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.740 0.740
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ogr09591 EBF1 1 173

Links

Other EBF1 family TFs
Other Ophisaurus gracilis TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pvit_04283 Pogona vitticeps Pvit_04283 I 0.994
ENSACAG00000005898 Anolis carolinensis ENSACAG00000005898 I 0.952
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.940
ENSSHAG00000011963 Sarcophilus harrisii ENSSHAG00000011963 I 0.931
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.931
EBF2 Gallus gallus ENSGALG00000000242 I 0.925
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.925
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.925
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.925
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.925
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.925
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.925
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.925
SINV26263 Solenopsis invicta SINV26263 I 0.917
Alligator_sinensis_CCG017610.1 Alligator sinensis Alligator_sinensis_CCG017610.1 I 0.914
ENSCSAG00000016062 Chlorocebus sabaeus ENSCSAG00000016062 I 0.914
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.896
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.896
ebf2.S Xenopus laevis XB-GENE-971141 I 0.873
ENSAMXG00000021198 Astyanax mexicanus ENSAMXG00000021198 I 0.833
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.827
EBF3 Echinops telfairi ENSETEG00000014060 I 0.827
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.821
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.815
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.815
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.812
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.805
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.799
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.798
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.798
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.798
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.793
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.793
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.793
si:ch211-51e8.2 Danio rerio ENSDARG00000092635 I 0.793
EBF1 Equus caballus ENSECAG00000007964 I 0.793
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.788
RPRC005513 Rhodnius prolixus RPRC005513 I 0.786
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.784
Alligator_sinensis_CCG000599.1 Alligator sinensis Alligator_sinensis_CCG000599.1 I 0.783
Ogr13832 Ophisaurus gracilis Ogr13832 I 0.781
ebf1b Danio rerio ENSDARG00000069196 I 0.780
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.780
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.780
ENSMPUG00000013409 Mustela putorius furo ENSMPUG00000013409 I 0.769
HelroG147258 Helobdella robusta HelroG147258 I 0.766
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.757
Myotis_brandtii_EBF3_10024821 Myotis brandtii Myotis_brandtii_EBF3_10024821 I 0.755
ENSSSCG00000025415 Sus scrofa ENSSSCG00000025415 I 0.751
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.750
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.748
AFUN004907 Anopheles funestus AFUN004907 I 0.747
SMAR000842 Strigamia maritima SMAR000842 I 0.741
Ebf4 Mus musculus ENSMUSG00000053552 D 0.740
ISCW021819 Ixodes scapularis ISCW021819 I 0.739
D918_06798 Trichuris suis D918_06798 I 0.738
ENSMEUG00000009275 Macropus eugenii ENSMEUG00000009275 I 0.733
LCUP013861 Lucilia cuprina LCUP013861 I 0.731
AARA002866 Anopheles arabiensis AARA002866 I 0.731
fgenesh2_pm.scaffold_381000001 Branchiostoma floridae fgenesh2_pm.scaffold_381000001 I 0.731
LotgiG225788 Lottia gigantea LotgiG225788 I 0.728
Sakowv30011013m.g Saccoglossus kowalevskii Sakowv30011013m.g I 0.723
Myotis_brandtii_Ebf3_10024822 Myotis brandtii Myotis_brandtii_Ebf3_10024822 I 0.719
ENSAMXG00000012646 Astyanax mexicanus ENSAMXG00000012646 I 0.717
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.717
Hsal_03265--XP_394171.3_APIME Harpegnathos saltator Hsal_03265--XP_394171.3_APIME I 0.715
AMEM016790 Anopheles merus AMEM016790 I 0.714
ACOM041538 Anopheles coluzzii ACOM041538 I 0.714
EBF2 Vicugna pacos ENSVPAG00000015422 I 0.709
SBAD_0000456201 Soboliphyme baturini SBAD_0000456201 I 0.708
MESCA011260 Megaselia scalaris MESCA011260 I 0.707
EBF4 Echinops telfairi ENSETEG00000015956 I 0.701
ENSAMXG00000002783 Astyanax mexicanus ENSAMXG00000002783 I 0.701