CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMTR_s00025p00250380
(
Amborella trichopoda
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
AMTR_s00025p00250380
T191678_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN12699
GATA
113
148
CADCKTVKTPLWRNGPLGPKSLCNACGIRYKKLGKK
Links
Other
GATA
family TFs
Other
Amborella trichopoda
TFs
54 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr1G14780_001
Musa acuminata
GSMUA_Achr1G14780_001
N
0.811
TRAES3BF026000060CFD_g
Triticum aestivum
TRAES3BF026000060CFD_g
I
0.809
Traes_3AL_6DE434492
Triticum aestivum
Traes_3AL_6DE434492
I
0.809
TRIUR3_03165
Triticum urartu
TRIUR3_03165
I
0.809
VIT_14s0060g01520
Vitis vinifera
VIT_14s0060g01520
I
0.809
30128.m008883
Ricinus communis
30128.m008883
N
0.809
TCM_026732
Theobroma cacao
TCM_026732
I
0.809
cassava15577.m1
Manihot esculenta
cassava15577.m1
I
0.809
OS03G0831200
Oryza sativa
OS03G0831200
I
0.809
POPTR_0005s02040
Populus trichocarpa
POPTR_0005s02040
I
0.809
Sb03g047520
Sorghum bicolor
Sb03g047520
I
0.809
Si002983m.g
Setaria italica
Si002983m.g
I
0.809
OS01G0976800
Oryza sativa
OS01G0976800
I
0.809
cassava15588.m1
Manihot esculenta
cassava15588.m1
I
0.809
Pavir.Eb04066
Panicum virgatum
Pavir.Eb04066
I
0.809
SapurV1A.0107s0060
Salix purpurea
SapurV1A.0107s0060
I
0.809
SapurV1A.0186s0560
Salix purpurea
SapurV1A.0186s0560
I
0.809
PK21934.1
Cannabis sativa
PK21934.1
I
0.809
orange1.1g033001m.g
Citrus sinensis
orange1.1g033001m.g
I
0.809
Gorai.013G127900
Gossypium raimondii
Gorai.013G127900
I
0.809
Ciclev10022856m.g
Citrus clementina
Ciclev10022856m.g
I
0.809
evm.TU.supercontig_151.51
Carica papaya
evm.TU.supercontig_151.51
I
0.809
evm.TU.supercontig_48.133
Carica papaya
evm.TU.supercontig_48.133
I
0.809
Gorai.007G125000
Gossypium raimondii
Gorai.007G125000
I
0.809
AMTR_s00147p00053080
Amborella trichopoda
AMTR_s00147p00053080
N
0.809
ORUFI03G41540
Oryza rufipogon
ORUFI03G41540
I
0.809
LPERR04G11580
Leersia perrieri
LPERR04G11580
I
0.809
LPERR03G33900
Leersia perrieri
LPERR03G33900
I
0.809
MLOC_54886
Hordeum vulgare
MLOC_54886
I
0.809
OB01G55040
Oryza brachyantha
OB01G55040
I
0.809
OBART01G45830
Oryza barthii
OBART01G45830
I
0.809
GSMUA_Achr8G33850_001
Musa acuminata
GSMUA_Achr8G33850_001
N
0.809
BRADI2G62660
Brachypodium distachyon
BRADI2G62660
I
0.809
BGIOSGA000005
Oryza indica
BGIOSGA000005
I
0.809
BGIOSGA013867
Oryza indica
BGIOSGA013867
I
0.809
BGIOSGA013869
Oryza indica
BGIOSGA013869
I
0.809
BRADI1G03020
Brachypodium distachyon
BRADI1G03020
I
0.809
ORUFI01G49320
Oryza rufipogon
ORUFI01G49320
I
0.809
OBART03G39750
Oryza barthii
OBART03G39750
I
0.809
ONIVA01G52080
Oryza nivara
ONIVA01G52080
I
0.809
ORGLA01G0395900
Oryza glaberrima
ORGLA01G0395900
I
0.809
OPUNC03G36910
Oryza punctata
OPUNC03G36910
I
0.809
ONIVA03G41600
Oryza nivara
ONIVA03G41600
I
0.809
OPUNC03G36900
Oryza punctata
OPUNC03G36900
I
0.809
OMERI03G36600
Oryza meridionalis
OMERI03G36600
I
0.809
OGLUM01G50190
Oryza glumaepatula
OGLUM01G50190
I
0.809
OGLUM03G39650
Oryza glumaepatula
OGLUM03G39650
I
0.809
OLONG_011157
Oryza longistaminata
OLONG_011157
I
0.809
OLONG_023900
Oryza longistaminata
OLONG_023900
I
0.809
PRUPE_ppa018120mg
Prunus persica
PRUPE_ppa018120mg
N
0.807
Pm005502
Prunus mume
Pm005502
N
0.807
GSMUA_Achr7G03800_001
Musa acuminata
GSMUA_Achr7G03800_001
N
0.805
Lus10031464.g
Linum usitatissimum
Lus10031464.g
I
0.805
MDP0000309902
Malus domestica
MDP0000309902
I
0.805