MDP0000309902 (Malus domestica)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 MDP0000309902 T196683_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA16
M06897_2.00 		Arabidopsis thaliana
ATGATGATGATSATGATGATGATSATG
CATSATCATCATCATSATCATCATCAT		 Dap-seq
OMalley et al.(2016)
GATA16_col_a 		0.817 0.735
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000309902 GATA 656 689

Links

Other GATA family TFs
Other Malus domestica TFs

257 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PK21934.1 Cannabis sativa PK21934.1 I 0.861
Lus10031464.g Linum usitatissimum Lus10031464.g I 0.853
cassava15577.m1 Manihot esculenta cassava15577.m1 I 0.847
cassava15588.m1 Manihot esculenta cassava15588.m1 I 0.847
TCM_026732 Theobroma cacao TCM_026732 I 0.847
PGSC0003DMG400002337 Solanum tuberosum PGSC0003DMG400002337 I 0.847
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I 0.847
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I 0.847
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I 0.847
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I 0.847
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I 0.847
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I 0.847
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I 0.847
OMERI03G36600 Oryza meridionalis OMERI03G36600 I 0.836
OLONG_023900 Oryza longistaminata OLONG_023900 I 0.836
OBART03G39750 Oryza barthii OBART03G39750 I 0.836
LPERR03G33900 Leersia perrieri LPERR03G33900 I 0.836
ONIVA03G41600 Oryza nivara ONIVA03G41600 I 0.836
OGLUM03G39650 Oryza glumaepatula OGLUM03G39650 I 0.836
ORUFI03G41540 Oryza rufipogon ORUFI03G41540 I 0.836
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I 0.836
PGSC0003DMG400024783 Solanum tuberosum PGSC0003DMG400024783 I 0.836
OS03G0831200 Oryza sativa OS03G0831200 I 0.836
OPUNC03G36910 Oryza punctata OPUNC03G36910 I 0.836
OPUNC03G36900 Oryza punctata OPUNC03G36900 I 0.836
Solyc01g100220.2 Solanum lycopersicum Solyc01g100220.2 I 0.836
BGIOSGA013867 Oryza indica BGIOSGA013867 I 0.836
BGIOSGA013869 Oryza indica BGIOSGA013869 I 0.836
Cucsa.069460 Cucumis sativus Cucsa.069460 I 0.833
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I 0.833
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I 0.833
GLYMA07G37190 Glycine max GLYMA07G37190 I 0.833
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I 0.833
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I 0.833
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I 0.833
GLYMA17G03410 Glycine max GLYMA17G03410 I 0.833
TCM_004753 Theobroma cacao TCM_004753 I 0.833
29889.m003248 Ricinus communis 29889.m003248 I 0.833
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I 0.833
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I 0.833
PK18820.1 Cannabis sativa PK18820.1 I 0.833
Cla009422 Citrullus lanatus Cla009422 I 0.833
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I 0.833
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I 0.833
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I 0.833
Cucsa.252730 Cucumis sativus Cucsa.252730 I 0.828
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I 0.828
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I 0.828
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I 0.828
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I 0.828
Carubv10027332m.g Capsella rubella Carubv10027332m.g I 0.828
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I 0.828
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I 0.828
mgf003937m Mimulus guttatus mgf003937m I 0.828
Bo00847s050 Brassica oleracea Bo00847s050 I 0.828
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I 0.828
MTR_4g121110 Medicago truncatula MTR_4g121110 I 0.828
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I 0.828
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I 0.828
GATA16 Arabidopsis lyrata scaffold_801309.1 I 0.828
Pm008287 Prunus mume Pm008287 I 0.828
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I 0.828
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I 0.828
Cla022104 Citrullus lanatus Cla022104 I 0.828
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I 0.828
Ca_02992 Cicer arietinum Ca_02992 I 0.828
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I 0.828
TCM_021303 Theobroma cacao TCM_021303 I 0.828
Lus10037721.g Linum usitatissimum Lus10037721.g I 0.828
Lus10016849.g Linum usitatissimum Lus10016849.g I 0.828
mgf022078m Mimulus guttatus mgf022078m I 0.821
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I 0.820
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I 0.820
AMTR_s00147p00053080 Amborella trichopoda AMTR_s00147p00053080 N 0.820
30128.m008883 Ricinus communis 30128.m008883 N 0.820
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I 0.820
PGSC0003DMG400023434 Solanum tuberosum PGSC0003DMG400023434 I 0.819
Solyc05g054400.2 Solanum lycopersicum Solyc05g054400.2 I 0.819
GATA16 Arabidopsis thaliana AT5G49300 D 0.817
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.816
Solyc01g060490.2 Solanum lycopersicum Solyc01g060490.2 N 0.816
Bostr.30275s0055 Boechera stricta Bostr.30275s0055 I 0.814
Cagra.0053s0014 Capsella grandiflora Cagra.0053s0014 I 0.814
Bo1g122970 Brassica oleracea Bo1g122970 I 0.814
Bo1g055120 Brassica oleracea Bo1g055120 I 0.814
Thhalv10026300m.g Eutrema salsugineum Thhalv10026300m.g I 0.814
Thhalv10021612m.g Eutrema salsugineum Thhalv10021612m.g I 0.814
Cagra.5497s0020 Capsella grandiflora Cagra.5497s0020 I 0.814
Bostr.28625s0006 Boechera stricta Bostr.28625s0006 I 0.814
Carubv10014665m.g Capsella rubella Carubv10014665m.g I 0.814
Bra012742 Brassica rapa Bra012742 I 0.814
AT4G16141 Arabidopsis thaliana AT4G16141 I 0.814
Bo7g104200 Brassica oleracea Bo7g104200 I 0.814
GATA17 Arabidopsis thaliana AT3G16870 I 0.814
GATA17 Arabidopsis lyrata fgenesh2_kg.3__1856__AT3G16870.1 I 0.814
fgenesh1_pm.C_scaffold_7002128 Arabidopsis lyrata fgenesh1_pm.C_scaffold_7002128 I 0.814
Bra033533 Brassica rapa Bra033533 I 0.814
Bo5g123610 Brassica oleracea Bo5g123610 I 0.814
Bo3g068560 Brassica oleracea Bo3g068560 I 0.814
GSMUA_Achr7G03800_001 Musa acuminata GSMUA_Achr7G03800_001 N 0.814
Bra022184 Brassica rapa Bra022184 I 0.814
Bra021209 Brassica rapa Bra021209 I 0.814
Carubv10005860m.g Capsella rubella Carubv10005860m.g I 0.814
orange1.1g021329m.g Citrus sinensis orange1.1g021329m.g N 0.810
orange1.1g020987m.g Citrus sinensis orange1.1g020987m.g N 0.810
29912.m005322 Ricinus communis 29912.m005322 N 0.810
29794.m003323 Ricinus communis 29794.m003323 N 0.810
MDP0000131803 Malus domestica MDP0000131803 N 0.810
BGIOSGA006859 Oryza indica BGIOSGA006859 N 0.810
MDP0000190038 Malus domestica MDP0000190038 N 0.810
Pavir.Ab00790 Panicum virgatum Pavir.Ab00790 N 0.810
Pavir.Db01250 Panicum virgatum Pavir.Db01250 N 0.810
SapurV1A.0086s0290 Salix purpurea SapurV1A.0086s0290 N 0.810
VIT_11s0016g02210 Vitis vinifera VIT_11s0016g02210 N 0.810
Cla021191 Citrullus lanatus Cla021191 N 0.810
Pavir.Da00760 Panicum virgatum Pavir.Da00760 N 0.810
orange1.1g021859m.g Citrus sinensis orange1.1g021859m.g N 0.810
Pavir.Aa02907 Panicum virgatum Pavir.Aa02907 N 0.810
cassava32152.m1 Manihot esculenta cassava32152.m1 N 0.810
Pm027164 Prunus mume Pm027164 N 0.810
Gorai.010G101100 Gossypium raimondii Gorai.010G101100 N 0.810
Ciclev10008943m.g Citrus clementina Ciclev10008943m.g N 0.810
mgf025842m Mimulus guttatus mgf025842m N 0.810
mgf008387m Mimulus guttatus mgf008387m N 0.810
Ciclev10008968m.g Citrus clementina Ciclev10008968m.g N 0.810
Ciclev10009004m.g Citrus clementina Ciclev10009004m.g N 0.810
Aquca_020_00467 Aquilegia coerulea Aquca_020_00467 N 0.810
Bostr.26833s0575 Boechera stricta Bostr.26833s0575 N 0.810
Cagra.3467s0056 Capsella grandiflora Cagra.3467s0056 N 0.810
Cagra.4138s0005 Capsella grandiflora Cagra.4138s0005 N 0.810
Bostr.7867s0434 Boechera stricta Bostr.7867s0434 N 0.810
VIT_04s0008g01290 Vitis vinifera VIT_04s0008g01290 N 0.810
Carubv10026556m.g Capsella rubella Carubv10026556m.g N 0.810
Eucgr.C03048 Eucalyptus grandis Eucgr.C03048 N 0.810
Eucgr.C03895 Eucalyptus grandis Eucgr.C03895 N 0.810
cassava43851.valid.m1 Manihot esculenta cassava43851.valid.m1 N 0.810
Gorai.009G045000 Gossypium raimondii Gorai.009G045000 N 0.810
Gorai.010G082800 Gossypium raimondii Gorai.010G082800 N 0.810
Carubv10005113m.g Capsella rubella Carubv10005113m.g N 0.810
GATA22 Arabidopsis thaliana AT4G26150 N 0.810
Gorai.009G031400 Gossypium raimondii Gorai.009G031400 N 0.810
gene12624-v1.0-hybrid Fragaria vesca gene12624-v1.0-hybrid N 0.810
Cucsa.397360 Cucumis sativus Cucsa.397360 N 0.810
Cucsa.353330 Cucumis sativus Cucsa.353330 N 0.810
GATA21 Arabidopsis thaliana AT5G56860 N 0.810
evm.TU.supercontig_93.28 Carica papaya evm.TU.supercontig_93.28 N 0.810
cassava33236.m1 Manihot esculenta cassava33236.m1 N 0.810
Solyc12g008830.1 Solanum lycopersicum Solyc12g008830.1 N 0.810
GLYMA17G06290 Glycine max GLYMA17G06290 N 0.810
OMERI02G10250 Oryza meridionalis OMERI02G10250 N 0.810
GLYMA15G18380 Glycine max GLYMA15G18380 N 0.810
OGLUM06G20240 Oryza glumaepatula OGLUM06G20240 N 0.810
Bo7g110740 Brassica oleracea Bo7g110740 N 0.810
GRMZM2G031983 Zea mays GRMZM2G031983 N 0.810
OGLUM02G09200 Oryza glumaepatula OGLUM02G09200 N 0.810
ONIVA06G22870 Oryza nivara ONIVA06G22870 N 0.810
ONIVA11G03260 Oryza nivara ONIVA11G03260 N 0.810
ORGLA06G0158200 Oryza glaberrima ORGLA06G0158200 N 0.810
GLYMA04G05431 Glycine max GLYMA04G05431 N 0.810
ORUFI02G09020 Oryza rufipogon ORUFI02G09020 N 0.810
GLYMA13G00200 Glycine max GLYMA13G00200 N 0.810
OPUNC06G17260 Oryza punctata OPUNC06G17260 N 0.810
OPUNC02G08040 Oryza punctata OPUNC02G08040 N 0.810
Bo2g033970 Brassica oleracea Bo2g033970 N 0.810
OBART06G19060 Oryza barthii OBART06G19060 N 0.810
Bo9g127360 Brassica oleracea Bo9g127360 N 0.810
MLOC_10364 Hordeum vulgare MLOC_10364 N 0.810
MLOC_70809 Hordeum vulgare MLOC_70809 N 0.810
AMTR_s00064p00107710 Amborella trichopoda AMTR_s00064p00107710 N 0.810
LPERR06G15680 Leersia perrieri LPERR06G15680 N 0.810
GSMUA_Achr4G30820_001 Musa acuminata GSMUA_Achr4G30820_001 N 0.810
LPERR02G07780 Leersia perrieri LPERR02G07780 N 0.810
Bra002788 Brassica rapa Bra002788 N 0.810
MTR_2g038720 Medicago truncatula MTR_2g038720 N 0.810
MTR_4g126350 Medicago truncatula MTR_4g126350 N 0.810
GRMZM2G039586 Zea mays GRMZM2G039586 N 0.810
OBART02G08990 Oryza barthii OBART02G08990 N 0.810
OB06G26630 Oryza brachyantha OB06G26630 N 0.810
chr4.CM0244.740.nd Lotus japonicus chr4.CM0244.740.nd N 0.810
GSMUA_Achr10G27510_001 Musa acuminata GSMUA_Achr10G27510_001 N 0.810
OB02G18010 Oryza brachyantha OB02G18010 N 0.810
ORUFI06G20160 Oryza rufipogon ORUFI06G20160 N 0.810
GNC Arabidopsis lyrata fgenesh2_kg.8__1592__AT5G56860.1 N 0.810
BRADI1G37480 Brachypodium distachyon BRADI1G37480 N 0.810
TCM_037285 Theobroma cacao TCM_037285 N 0.810
TCM_037666 Theobroma cacao TCM_037666 N 0.810
Thhalv10013793m.g Eutrema salsugineum Thhalv10013793m.g N 0.810
Solyc07g038160.2 Solanum lycopersicum Solyc07g038160.2 N 0.810
Si019058m.g Setaria italica Si019058m.g N 0.810
Thhalv10025461m.g Eutrema salsugineum Thhalv10025461m.g N 0.810
Bra035633 Brassica rapa Bra035633 N 0.810
Bra026461 Brassica rapa Bra026461 N 0.810
Traes_7BL_86BB5C61E Triticum aestivum Traes_7BL_86BB5C61E N 0.810
Traes_7DL_BFADB408C Triticum aestivum Traes_7DL_BFADB408C N 0.810
Traes_6DS_77038429A Triticum aestivum Traes_6DS_77038429A N 0.810
Traes_6AS_1BF082306 Triticum aestivum Traes_6AS_1BF082306 N 0.810
Bra019118 Brassica rapa Bra019118 N 0.810
Traes_6AS_1BF0823061 Triticum aestivum Traes_6AS_1BF0823061 N 0.810
GSMUA_Achr8G24880_001 Musa acuminata GSMUA_Achr8G24880_001 N 0.810
Si006733m.g Setaria italica Si006733m.g N 0.810
PGSC0003DMG400004493 Solanum tuberosum PGSC0003DMG400004493 N 0.810
BGIOSGA023119 Oryza indica BGIOSGA023119 N 0.810
PGSC0003DMG400000280 Solanum tuberosum PGSC0003DMG400000280 N 0.810
OS06G0571800 Oryza sativa OS06G0571800 N 0.810
OS02G0220400 Oryza sativa OS02G0220400 N 0.810
Bo1g042950 Brassica oleracea Bo1g042950 N 0.810
BGIOSGA023117 Oryza indica BGIOSGA023117 N 0.810
POPTR_0006s24560 Populus trichocarpa POPTR_0006s24560 N 0.810
PK07593.1 Cannabis sativa PK07593.1 N 0.810
PRUPE_ppa024374mg Prunus persica PRUPE_ppa024374mg N 0.810
Sb04g007750 Sorghum bicolor Sb04g007750 N 0.810
CGA1 Arabidopsis lyrata fgenesh2_kg.7__1630__AT4G26150.1 N 0.810
Sb10g022580 Sorghum bicolor Sb10g022580 N 0.810
POPTR_0018s05160 Populus trichocarpa POPTR_0018s05160 N 0.810
BRADI3G08240 Brachypodium distachyon BRADI3G08240 N 0.810
GSMUA_Achr1G14780_001 Musa acuminata GSMUA_Achr1G14780_001 N 0.809
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I 0.809
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I 0.809
ONIVA01G52080 Oryza nivara ONIVA01G52080 I 0.809
OS01G0976800 Oryza sativa OS01G0976800 I 0.809
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I 0.809
GSMUA_Achr8G33850_001 Musa acuminata GSMUA_Achr8G33850_001 N 0.809
Sb03g047520 Sorghum bicolor Sb03g047520 I 0.809
Si002983m.g Setaria italica Si002983m.g I 0.809
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I 0.809
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I 0.809
TRIUR3_03165 Triticum urartu TRIUR3_03165 I 0.809
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I 0.809
OLONG_011157 Oryza longistaminata OLONG_011157 I 0.809
BGIOSGA000005 Oryza indica BGIOSGA000005 I 0.809
MLOC_54886 Hordeum vulgare MLOC_54886 I 0.809
OBART01G45830 Oryza barthii OBART01G45830 I 0.809
LPERR04G11580 Leersia perrieri LPERR04G11580 I 0.809
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I 0.809
OB01G55040 Oryza brachyantha OB01G55040 I 0.809
CME102C Cyanidioschyzon merolae CME102C N 0.808
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I 0.807
Pm003128 Prunus mume Pm003128 I 0.807
chr5.CM0019.380.nc Lotus japonicus chr5.CM0019.380.nc N 0.805
Pavir.J12379 Panicum virgatum Pavir.J12379 I 0.805
Traes_5BL_F258582BB Triticum aestivum Traes_5BL_F258582BB I 0.805
PGSC0003DMG400031828 Solanum tuberosum PGSC0003DMG400031828 N 0.805
PRUPE_ppa018120mg Prunus persica PRUPE_ppa018120mg N 0.805
Sb01g002270 Sorghum bicolor Sb01g002270 I 0.805
MTR_1g016170 Medicago truncatula MTR_1g016170 N 0.805
GRMZM2G114775 Zea mays GRMZM2G114775 I 0.805
F775_43556 Aegilops tauschii F775_43556 I 0.805
GLYMA17G34670 Glycine max GLYMA17G34670 N 0.805
Si037892m.g Setaria italica Si037892m.g I 0.805
AMTR_s00025p00250380 Amborella trichopoda AMTR_s00025p00250380 N 0.805
MDP0000237740 Malus domestica MDP0000237740 N 0.805
MDP0000739900 Malus domestica MDP0000739900 N 0.805
gene02686-v1.0-hybrid Fragaria vesca gene02686-v1.0-hybrid N 0.805
Pm005502 Prunus mume Pm005502 N 0.805
Solyc09g075610.2 Solanum lycopersicum Solyc09g075610.2 N 0.805
Traes_6BS_4EA352A7A Triticum aestivum Traes_6BS_4EA352A7A N 0.805
Pavir.J03766 Panicum virgatum Pavir.J03766 I 0.805