OMERI06G26410 (Oryza meridionalis)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 OMERI06G26410 T194442_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.865 0.971
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.856 0.853
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.850 0.853
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.850 0.853
ZIM
M06892_2.00 		Arabidopsis thaliana
AWYSRACGGYYVWGA
TCWBRRCCGTYSRWT		 Dap-seq
OMalley et al.(2016)
ZIM_col_a 		0.809 0.794
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI06G26410.1 GATA 256 291

Links

Other GATA family TFs
Other Oryza meridionalis TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA020596 Oryza indica BGIOSGA020596 I 0.867
ONIVA06G28780 Oryza nivara ONIVA06G28780 I 0.865
OPUNC02G02970 Oryza punctata OPUNC02G02970 I 0.865
OPUNC06G23830 Oryza punctata OPUNC06G23830 I 0.865
OLONG_015069 Oryza longistaminata OLONG_015069 I 0.865
GRMZM2G080509 Zea mays GRMZM2G080509 I 0.865
GSMUA_Achr3G05620_001 Musa acuminata GSMUA_Achr3G05620_001 I 0.865
OGLUM06G27650 Oryza glumaepatula OGLUM06G27650 I 0.865
ORGLA06G0219100 Oryza glaberrima ORGLA06G0219100 I 0.865
OBART06G26250 Oryza barthii OBART06G26250 I 0.865
BRADI1G33980 Brachypodium distachyon BRADI1G33980 I 0.865
Pm013048 Prunus mume Pm013048 I 0.865
OS06G0698900 Oryza sativa OS06G0698900 D 0.865
ORUFI06G28170 Oryza rufipogon ORUFI06G28170 I 0.865
PRUPE_ppa009709mg Prunus persica PRUPE_ppa009709mg I 0.865
Cla015736 Citrullus lanatus Cla015736 I 0.862
OGLUM02G03560 Oryza glumaepatula OGLUM02G03560 I 0.861
PDK_20s1340921g001 Phoenix dactylifera PDK_20s1340921g001 I 0.861
OB06G33840 Oryza brachyantha OB06G33840 I 0.861
OBART02G03780 Oryza barthii OBART02G03780 I 0.861
Cucsa.359570 Cucumis sativus Cucsa.359570 I 0.861
OMERI02G04610 Oryza meridionalis OMERI02G04610 I 0.861
ORGLA02G0035000 Oryza glaberrima ORGLA02G0035000 I 0.861
OB02G13220 Oryza brachyantha OB02G13220 I 0.861
GATA17 Oryza sativa OS02G0148500 I 0.861
ONIVA02G03810 Oryza nivara ONIVA02G03810 I 0.861
ORUFI02G03830 Oryza rufipogon ORUFI02G03830 I 0.861
Sb10g028750 Sorghum bicolor Sb10g028750 I 0.861
LPERR06G21800 Leersia perrieri LPERR06G21800 I 0.861
LPERR02G03330 Leersia perrieri LPERR02G03330 I 0.861
GRMZM2G058479 Zea mays GRMZM2G058479 I 0.861
ZML1 Arabidopsis lyrata fgenesh2_kg.3__2338__AT3G21175.1 I 0.861
BGIOSGA007539 Oryza indica BGIOSGA007539 I 0.861
Si006750m.g Setaria italica Si006750m.g I 0.856
Pavir.Db00254 Panicum virgatum Pavir.Db00254 I 0.856
Pavir.Da00166 Panicum virgatum Pavir.Da00166 I 0.856
PDK_20s1879741g001 Phoenix dactylifera PDK_20s1879741g001 I 0.856
GATA24 Arabidopsis thaliana AT3G21175 D 0.856
orange1.1g022728m.g Citrus sinensis orange1.1g022728m.g I 0.851
Aquca_007_00522 Aquilegia coerulea Aquca_007_00522 I 0.851
GSMUA_Achr2G04520_001 Musa acuminata GSMUA_Achr2G04520_001 I 0.851
fgenesh1_pm.scaffold_69000012 Physcomitrella patens fgenesh1_pm.scaffold_69000012 I 0.850
Ca_17522 Cicer arietinum Ca_17522 I 0.850
e_gw1.226.30.1 Physcomitrella patens e_gw1.226.30.1 I 0.850
Traes_7AL_EA6F4FFDE Triticum aestivum Traes_7AL_EA6F4FFDE I 0.850
fgenesh2_pm.scaffold_111000001 Physcomitrella patens fgenesh2_pm.scaffold_111000001 I 0.850
Traes_7DL_A5ECEDA95 Triticum aestivum Traes_7DL_A5ECEDA95 I 0.850
TRIUR3_11107 Triticum urartu TRIUR3_11107 I 0.850
TCM_027858 Theobroma cacao TCM_027858 I 0.850
Eucgr.J03166 Eucalyptus grandis Eucgr.J03166 I 0.850
SapurV1A.0036s1170 Salix purpurea SapurV1A.0036s1170 I 0.850
Thhalv10011695m.g Eutrema salsugineum Thhalv10011695m.g I 0.850
Thhalv10020970m.g Eutrema salsugineum Thhalv10020970m.g I 0.850
GATA28 Arabidopsis thaliana AT1G51600 D 0.850
evm.TU.supercontig_155.28 Carica papaya evm.TU.supercontig_155.28 I 0.850
Ciclev10027306m.g Citrus clementina Ciclev10027306m.g I 0.850
Bostr.26675s0048 Boechera stricta Bostr.26675s0048 I 0.850
Cagra.2346s0015 Capsella grandiflora Cagra.2346s0015 I 0.850
Carubv10009866m.g Capsella rubella Carubv10009866m.g I 0.850
gw1.68.123.1 Physcomitrella patens gw1.68.123.1 I 0.850
VIT_09s0054g00440 Vitis vinifera VIT_09s0054g00440 I 0.850
GLYMA08G23720 Glycine max GLYMA08G23720 I 0.850
MLOC_17061 Hordeum vulgare MLOC_17061 I 0.850
POPTR_0010s25810 Populus trichocarpa POPTR_0010s25810 I 0.850
Bra014292 Brassica rapa Bra014292 I 0.850
Bo3g181450 Brassica oleracea Bo3g181450 I 0.850
ZML2 Arabidopsis lyrata scaffold_104929.1 I 0.850
GSMUA_Achr9G13870_001 Musa acuminata GSMUA_Achr9G13870_001 I 0.850
LPERR11G14110 Leersia perrieri LPERR11G14110 I 0.848
GSMUA_Achr10G06260_001 Musa acuminata GSMUA_Achr10G06260_001 I 0.846
F775_08559 Aegilops tauschii F775_08559 I 0.846
Traes_6BS_AB5909D02 Triticum aestivum Traes_6BS_AB5909D02 I 0.846
GSMUA_Achr7G08720_001 Musa acuminata GSMUA_Achr7G08720_001 I 0.846
Traes_6AS_4106E8E28 Triticum aestivum Traes_6AS_4106E8E28 I 0.846
Traes_6DS_6268D31AE Triticum aestivum Traes_6DS_6268D31AE I 0.846
Aquca_018_00034 Aquilegia coerulea Aquca_018_00034 I 0.846
TRIUR3_32095 Triticum urartu TRIUR3_32095 I 0.846
MLOC_3107 Hordeum vulgare MLOC_3107 I 0.846
Bo5g103560 Brassica oleracea Bo5g103560 I 0.845
SELMODRAFT_177195 Selaginella moellendorffii SELMODRAFT_177195 I 0.845
SELMODRAFT_423855 Selaginella moellendorffii SELMODRAFT_423855 I 0.845
Bra023900 Brassica rapa Bra023900 I 0.845
Bo1g108240 Brassica oleracea Bo1g108240 I 0.845
Carubv10016131m.g Capsella rubella Carubv10016131m.g I 0.845
Bra031258 Brassica rapa Bra031258 I 0.845
Cagra.1757s0004 Capsella grandiflora Cagra.1757s0004 I 0.845
mgf016112m Mimulus guttatus mgf016112m I 0.842
Pm022163 Prunus mume Pm022163 I 0.836
SapurV1A.0187s0150 Salix purpurea SapurV1A.0187s0150 I 0.836
PRUPE_ppa009401mg Prunus persica PRUPE_ppa009401mg I 0.836
Gorai.008G017800 Gossypium raimondii Gorai.008G017800 I 0.836
29838.m001724 Ricinus communis 29838.m001724 I 0.836
TCM_007360 Theobroma cacao TCM_007360 I 0.836
POPTR_0007s03130 Populus trichocarpa POPTR_0007s03130 I 0.836
Cla013127 Citrullus lanatus Cla013127 I 0.832
Aquca_010_00250 Aquilegia coerulea Aquca_010_00250 I 0.832
Cucsa.218190 Cucumis sativus Cucsa.218190 I 0.831
POPTR_0017s06980 Populus trichocarpa POPTR_0017s06980 I 0.831
cassava12169.valid.m1 Manihot esculenta cassava12169.valid.m1 I 0.831
cassava6876.valid.m1 Manihot esculenta cassava6876.valid.m1 I 0.831
BRADI3G03800 Brachypodium distachyon BRADI3G03800 I 0.828
MTR_4g008070 Medicago truncatula MTR_4g008070 I 0.819
LjSGA_067759.1 Lotus japonicus LjSGA_067759.1 I 0.819
Carubv10006355m.g Capsella rubella Carubv10006355m.g I 0.809
MTR_3g100050 Medicago truncatula MTR_3g100050 I 0.809
Thhalv10025795m.g Eutrema salsugineum Thhalv10025795m.g I 0.809
Cagra.2171s0014 Capsella grandiflora Cagra.2171s0014 I 0.809
Bostr.7867s0254 Boechera stricta Bostr.7867s0254 I 0.809
ZIM Arabidopsis thaliana AT4G24470 D 0.809
Bra013805 Brassica rapa Bra013805 I 0.809
TIFY1 Arabidopsis lyrata fgenesh2_kg.7__1832__AT4G24470.2 I 0.809
Bo1g039000 Brassica oleracea Bo1g039000 I 0.809
Ca_01471 Cicer arietinum Ca_01471 I 0.805