CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MEIS3
(
Callithrix jacchus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSCJAG00000011475
T207988_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Meis3
M00488_2.00
Mus musculus
NTGACANNN
NNNTGTCAN
PBM
Berger et al.(2008)
Mrg2_2302
0.447
1.000
Meis3
M03279_2.00
Mus musculus
NTGACAN
NTGTCAN
SELEX
Jolma et al.(2013)
Meis3_1
0.447
1.000
Meis3
M03280_2.00
Mus musculus
TGACAGSTGTCA
TGACASCTGTCA
SELEX
Jolma et al.(2013)
Meis3_2
0.447
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCJAP00000021128
Homeodomain
263
312
NKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNW
ENSCJAP00000021132
Homeodomain
329
357
WPQHPYPSEEQKKQLAQDTGLTILQVNNW
Links
Other
Homeodomain
family TFs
Other
Callithrix jacchus
TFs
147 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SROB_0000951501
Schistosoma rodhaini
SROB_0000951501
N
0.853
NBR_0001551701
Nippostrongylus brasiliensis
NBR_0001551701
N
0.853
D917_09995
Trichinella nativa
D917_09995
I
0.853
EFV59239
Trichinella spiralis
EFV59239
N
0.853
ENSPSIG00000016694
Pelodiscus sinensis
ENSPSIG00000016694
N
0.852
SMTD_0001546801
Schistosoma mattheei
SMTD_0001546801
N
0.839
Pvit_18888
Pogona vitticeps
Pvit_18888
I
0.835
ENSMGAG00000015905
Meleagris gallopavo
ENSMGAG00000015905
I
0.835
SCUD_0001235001
Schistosoma curassoni
SCUD_0001235001
N
0.835
D915_09501
Fasciola hepatica
D915_09501
I
0.835
ENSCSAG00000007217
Chlorocebus sabaeus
ENSCSAG00000007217
I
0.835
Brh_R013532
Buceros rhinoceros
Brh_R013532
I
0.835
DILT_0001314701
Diphyllobothrium latum
DILT_0001314701
N
0.835
D918_09737
Trichuris suis
D918_09737
N
0.835
PHUM547170
Pediculus humanus
PHUM547170
I
0.835
ENSPANG00000019600
Papio anubis
ENSPANG00000019600
I
0.835
SPER_0001318201
Spirometra erinaceieuropaei
SPER_0001318201
N
0.835
Tal_R002601
Tyto alba
Tal_R002601
I
0.835
TRE_0000372801
Trichobilharzia regenti
TRE_0000372801
N
0.835
LDEC001304
Leptinotarsa decemlineata
LDEC001304
I
0.835
TTRE_0000256401
Trichuris trichiura
TTRE_0000256401
N
0.835
nRc.2.0.1.g19666
Romanomermis culicivorax
nRc.2.0.1.g19666
N
0.833
CapteG139538
Capitella teleta
CapteG139538
N
0.823
LotgiG178004
Lottia gigantea
LotgiG178004
N
0.819
SINV18611
Solenopsis invicta
SINV18611
N
0.806
nDi.2.2.2.g12219
Dirofilaria immitis
nDi.2.2.2.g12219
N
0.794
MEIS2
Sorex araneus
ENSSARG00000006585
I
0.788
MEIS2
Taeniopygia guttata
ENSTGUG00000011748
I
0.788
MCOS_0000352701
Mesocestoides corti
MCOS_0000352701
N
0.774
PEQ_0000908401
Parascaris equorum
PEQ_0000908401
N
0.773
CLEC025153
Cimex lectularius
CLEC025153
I
0.770
Meis3
Mus musculus
ENSMUSG00000041420
D
0.768
ENSPMAG00000005538
Petromyzon marinus
ENSPMAG00000005538
N
0.749
PHOX2A
Homo sapiens
ENSG00000165462
D
0.740
ACAC_0000073601
Angiostrongylus cantonensis
ACAC_0000073601
N
0.725
AAA85027
Xenopus laevis
AAA85027
I
0.725
hoxa10.L
Xenopus laevis
XB-GENE-6486002
I
0.720
hoxb2.S
Xenopus laevis
XB-GENE-478530
I
0.720
hoxa4.S
Xenopus laevis
XB-GENE-865635
N
0.720
AAA85030
Xenopus laevis
AAA85030
N
0.720
ACEP17701
Atta cephalotes
ACEP17701
N
0.713
ENSMEUG00000003851
Macropus eugenii
ENSMEUG00000003851
I
0.703
PKNOX2
Choloepus hoffmanni
ENSCHOG00000008048
I
0.703
Pknox2
Dipodomys ordii
ENSDORG00000008635
I
0.703
PKNOX1
Procavia capensis
ENSPCAG00000016718
I
0.703
Aan_R012134
Calypte anna
Aan_R012134
I
0.703
SCUD_0000812001
Schistosoma curassoni
SCUD_0000812001
N
0.702
DILT_0001433701
Diphyllobothrium latum
DILT_0001433701
N
0.695
SVUK_0000323501
Strongylus vulgaris
SVUK_0000323501
N
0.695
Cmyd_10012611
Chelonia mydas
Cmyd_10012611
N
0.694
ANCDUO_21460
Ancylostoma duodenale
ANCDUO_21460
N
0.692
ANCDUO_21488
Ancylostoma duodenale
ANCDUO_21488
N
0.692
ENSPMAG00000009999
Petromyzon marinus
ENSPMAG00000009999
N
0.687
ENSPMAG00000010256
Petromyzon marinus
ENSPMAG00000010256
N
0.687
nRc.2.0.1.g13634
Romanomermis culicivorax
nRc.2.0.1.g13634
N
0.685
MTR_3g112300
Medicago truncatula
MTR_3g112300
I
0.684
SROB_0000391301
Schistosoma rodhaini
SROB_0000391301
N
0.684
ECPE_0000380901
Echinostoma caproni
ECPE_0000380901
N
0.684
ENSSHAG00000016995
Sarcophilus harrisii
ENSSHAG00000016995
N
0.680
CTTNBP2NL
Monodelphis domestica
ENSMODG00000001211
N
0.680
Brh_R000003
Buceros rhinoceros
Brh_R000003
I
0.676
ENSAPLG00000006966
Anas platyrhynchos
ENSAPLG00000006966
N
0.672
Minc08600
Meloidogyne incognita
Minc08600
N
0.672
A_07772
Schistosoma haematobium
A_07772
N
0.671
MVLG_07150
Microbotryum violaceum
MVLG_07150
N
0.670
EVEC_0001028401
Enterobius vermicularis
EVEC_0001028401
N
0.669
L898_g2802
Steinernema monticolum
L898_g2802
N
0.666
SCLCIDRAFT_1207514
Scleroderma citrinum
SCLCIDRAFT_1207514
N
0.665
L893_g22533
Steinernema glaseri
L893_g22533
N
0.664
SVUK_0001098001
Strongylus vulgaris
SVUK_0001098001
N
0.661
L889_g12823
Steinernema feltiae
L889_g12823
N
0.659
PEQ_0001057801
Parascaris equorum
PEQ_0001057801
N
0.652
orange1.1g005863m.g
Citrus sinensis
orange1.1g005863m.g
I
0.651
HPBE_0002557401
Heligmosomoides bakeri
HPBE_0002557401
N
0.646
L892_g23489
Steinernema scapterisci
L892_g23489
N
0.644
Carubv10013054m.g
Capsella rubella
Carubv10013054m.g
N
0.643
MCINX013555
Melitaea cinxia
MCINX013555
N
0.638
GLRG_06242
Colletotrichum graminicola
GLRG_06242
N
0.638
fgeneshTM_pg.13_#_82
Tremella mesenterica
fgeneshTM_pg.13_#_82
N
0.638
CAA77673
Xenopus laevis
CAA77673
I
0.637
lhx5.S
Xenopus laevis
XB-GENE-865965
I
0.637
ACUA018278
Anopheles culicifacies
ACUA018278
N
0.637
CJA41362
Caenorhabditis japonica
CJA41362
N
0.636
lhx3.L
Xenopus laevis
XB-GENE-865930
I
0.635
PEQ_0000480201
Parascaris equorum
PEQ_0000480201
N
0.635
LLOJ003025
Lutzomyia longipalpis
LLOJ003025
N
0.634
ASIS021566
Anopheles sinensis
ASIS021566
N
0.630
ENSETEG00000007628
Echinops telfairi
ENSETEG00000007628
I
0.630
ENSMMUG00000032301
Macaca mulatta
ENSMMUG00000032301
I
0.630
ENSPPYG00000005435
Pongo abelii
ENSPPYG00000005435
N
0.630
MCINX000790
Melitaea cinxia
MCINX000790
N
0.630
ENSMMUG00000030441
Macaca mulatta
ENSMMUG00000030441
I
0.630
TVAG_170510
Trichomonas vaginalis
TVAG_170510
N
0.629
ENSTRUG00000017521
Takifugu rubripes
ENSTRUG00000017521
I
0.625
ISCW021207
Ixodes scapularis
ISCW021207
N
0.624
SNAPOd2T00000484001
Oikopleura dioica
SNAPOd2T00000484001
N
0.623
RO3G_00994
Rhizopus oryzae
RO3G_00994
N
0.622
CMU_000020
Cryptosporidium muris
CMU_000020
N
0.622
LCUP014212
Lucilia cuprina
LCUP014212
N
0.621
L798_12976
Zootermopsis nevadensis
L798_12976
N
0.621
GPLIN_001034800
Globodera pallida
GPLIN_001034800
N
0.619
CJA33058
Caenorhabditis japonica
CJA33058
N
0.619
CPIJ015450
Culex quinquefasciatus
CPIJ015450
N
0.619
Gorai.003G023300
Gossypium raimondii
Gorai.003G023300
N
0.619
CpipJ_CPIJ015450
Culex pipiens
CpipJ_CPIJ015450
N
0.619
BGLB008237
Biomphalaria glabrata
BGLB008237
N
0.617
EMIHUDRAFT_241459
Emiliania huxleyi
EMIHUDRAFT_241459
N
0.615
ENSCSAVG00000002570
Ciona savignyi
ENSCSAVG00000002570
N
0.614
CGI_10009567
Crassostrea gigas
CGI_10009567
N
0.608
Tgif2
Mus musculus
ENSMUSG00000062175
D
0.608
ORGLA08G0133100
Oryza glaberrima
ORGLA08G0133100
N
0.607
OBART08G15250
Oryza barthii
OBART08G15250
N
0.607
PEQ_0001303101
Parascaris equorum
PEQ_0001303101
N
0.601
ENSXMAG00000019975
Xiphophorus maculatus
ENSXMAG00000019975
N
0.601
ENSPPYG00000010173
Pongo abelii
ENSPPYG00000010173
N
0.519
MEIS3
Homo sapiens
ENSG00000105419
D
0.447
MEIS3
Equus caballus
ENSECAG00000016791
I
0.447
ENSLACG00000014906
Latimeria chalumnae
ENSLACG00000014906
I
0.447
ENSMPUG00000004760
Mustela putorius furo
ENSMPUG00000004760
I
0.447
MEIS3
Macaca mulatta
ENSMMUG00000013009
I
0.447
ENSLOCG00000016026
Lepisosteus oculatus
ENSLOCG00000016026
I
0.447
ENSCSAG00000002950
Chlorocebus sabaeus
ENSCSAG00000002950
I
0.447
ENSAMXG00000015217
Astyanax mexicanus
ENSAMXG00000015217
I
0.447
ENSAMXG00000014899
Astyanax mexicanus
ENSAMXG00000014899
I
0.447
ENSAMEG00000008199
Ailuropoda melanoleuca
ENSAMEG00000008199
I
0.447
MEIS3
Bos taurus
ENSBTAG00000006862
I
0.447
MEIS3
Canis familiaris
ENSCAFG00000004161
I
0.447
ENSMPUG00000019950
Mustela putorius furo
ENSMPUG00000019950
I
0.447
MEIS3
Cavia porcellus
ENSCPOG00000026589
I
0.447
meis1b
Danio rerio
ENSDARG00000012078
I
0.447
MEIS3
Oryctolagus cuniculus
ENSOCUG00000025760
I
0.447
meis1b
Takifugu rubripes
ENSTRUG00000011993
I
0.447
ENSSTOG00000028182
Ictidomys tridecemlineatus
ENSSTOG00000028182
I
0.447
MEIS3
Sus scrofa
ENSSSCG00000003115
I
0.447
ENSBTAP00000009013-D1
Bos grunniens
ENSBTAP00000009013-D1
I
0.447
Myotis_brandtii_MEIS3_10010043
Myotis brandtii
Myotis_brandtii_MEIS3_10010043
I
0.447
meis3.S
Xenopus laevis
XB-GENE-485341
I
0.447
meis3
Xenopus tropicalis
XB-GENE-485337
I
0.447
Meis3
Rattus norvegicus
ENSRNOG00000021390
I
0.447
ENSPFOG00000003364
Poecilia formosa
ENSPFOG00000003364
I
0.447
meis3.L
Xenopus laevis
XB-GENE-6252025
I
0.447
ENSOARG00000011113
Ovis aries
ENSOARG00000011113
I
0.447
MEIS3
Otolemur garnettii
ENSOGAG00000002063
I
0.447
ENSONIG00000001236
Oreochromis niloticus
ENSONIG00000001236
I
0.447
MEIS3
Procavia capensis
ENSPCAG00000016512
I
0.447
ENSPANG00000002238
Papio anubis
ENSPANG00000002238
I
0.447
ENSNLEG00000003031
Nomascus leucogenys
ENSNLEG00000003031
I
0.447