Cucsa.310460 (Cucumis sativus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Cucsa.310460 T227218_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.310460.1 Homeodomain 275 327

Links

Other Homeodomain family TFs
Other Cucumis sativus TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cla021272 Citrullus lanatus Cla021272 N 0.867
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.757
29848.m004652 Ricinus communis 29848.m004652 N 0.733
PK00680.1 Cannabis sativa PK00680.1 N 0.720
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.713
TCM_038389 Theobroma cacao TCM_038389 N 0.713
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.712
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.708
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.705
OCP3 Arabidopsis thaliana AT5G11270 N 0.705
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.705
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.705
Pm004594 Prunus mume Pm004594 N 0.697
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.697
MDP0000119866 Malus domestica MDP0000119866 N 0.696
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.695
Bra008975 Brassica rapa Bra008975 N 0.695
Bo9g171420 Brassica oleracea Bo9g171420 N 0.695
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.692
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.690
MDP0000202143 Malus domestica MDP0000202143 N 0.685
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.678
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.677
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.669
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.668
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.668
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.663
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.663
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.658
OB06G27850 Oryza brachyantha OB06G27850 N 0.656
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.654
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.654
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.640
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.637
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.637
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.635
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.635
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.635
OBART06G20210 Oryza barthii OBART06G20210 N 0.635
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.635
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.635
OS06G0601000 Oryza sativa OS06G0601000 N 0.635
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.633
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.609
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.606
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.606
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.606
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.606