Lus10002899.g (Linum usitatissimum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Lus10002899.g T228828_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10002899 Homeodomain 227 279

Links

Other Homeodomain family TFs
Other Linum usitatissimum TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.746
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.714
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.690
Cla021272 Citrullus lanatus Cla021272 N 0.690
29848.m004652 Ricinus communis 29848.m004652 N 0.690
MDP0000202143 Malus domestica MDP0000202143 N 0.677
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.670
PK00680.1 Cannabis sativa PK00680.1 N 0.667
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.658
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.658
TCM_038389 Theobroma cacao TCM_038389 N 0.658
MDP0000119866 Malus domestica MDP0000119866 N 0.657
Pm004594 Prunus mume Pm004594 N 0.654
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.654
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.654
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.654
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.633
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.633
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.633
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.633
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.633
OCP3 Arabidopsis thaliana AT5G11270 N 0.633
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.631
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.626
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.622
Bra008975 Brassica rapa Bra008975 N 0.622
Bo9g171420 Brassica oleracea Bo9g171420 N 0.622
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.619
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.617
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.614
BRADI1G36770 Brachypodium distachyon BRADI1G36770 N 0.612
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.610
OB06G27850 Oryza brachyantha OB06G27850 N 0.600
Ca_01772 Cicer arietinum Ca_01772 N 0.599