Pavir.J22932 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.J22932 T229352_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J22932.1.p Homeodomain 36 99

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_4AL_5659286D11 Triticum aestivum Traes_4AL_5659286D11 N 0.865
Eucgr.I00022 Eucalyptus grandis Eucgr.I00022 I 0.638
SELMODRAFT_59936 Selaginella moellendorffii SELMODRAFT_59936 I 0.628
SELMODRAFT_49899 Selaginella moellendorffii SELMODRAFT_49899 I 0.628
mgf026503m Mimulus guttatus mgf026503m I 0.623
Lus10015900.g Linum usitatissimum Lus10015900.g I 0.620
Si020227m.g Setaria italica Si020227m.g I 0.620
Pavir.Aa00802 Panicum virgatum Pavir.Aa00802 I 0.618
Gorai.012G046200 Gossypium raimondii Gorai.012G046200 I 0.618
Ca_12172 Cicer arietinum Ca_12172 I 0.618
Sb04g030480 Sorghum bicolor Sb04g030480 I 0.618
GRMZM2G069365 Zea mays GRMZM2G069365 I 0.618
GLYMA20G35690 Glycine max GLYMA20G35690 I 0.618
29983.m003297 Ricinus communis 29983.m003297 I 0.617
POPTR_0004s14270 Populus trichocarpa POPTR_0004s14270 I 0.606
SapurV1A.0185s0100 Salix purpurea SapurV1A.0185s0100 I 0.606
cassava39895.m1 Manihot esculenta cassava39895.m1 I 0.605
gene14755-v1.0-hybrid Fragaria vesca gene14755-v1.0-hybrid I 0.604