Bo2g165560 (Brassica oleracea)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bo2g165560 T239784_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF4
M03325_2.00 		Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC		 SELEX
Jolma et al.(2013)
HSF4_1 		0.343 0.386
HSF4
M05509_2.00 		Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB		 SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX 		0.343 0.386
HSF4
M10862_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HSF4_Q3 		0.343 0.386
HSF4
M05510_2.00 		Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY		 SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX 		0.343 0.386
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.333 0.500
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo2g165560.1 HSF 45 136

Links

Other HSF family TFs
Other Brassica oleracea TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra029226 Brassica rapa Bra029226 I 0.594
Bo2g165540 Brassica oleracea Bo2g165540 I 0.527
Bo01835s010 Brassica oleracea Bo01835s010 N 0.515
Bo4g190160 Brassica oleracea Bo4g190160 I 0.397
Bra016998 Brassica rapa Bra016998 I 0.396
Bra016996 Brassica rapa Bra016996 I 0.396
Bra002882 Brassica rapa Bra002882 I 0.392
Bo7g061750 Brassica oleracea Bo7g061750 I 0.391
Bostr.0556s0470 Boechera stricta Bostr.0556s0470 I 0.377
Bostr.3359s0057 Boechera stricta Bostr.3359s0057 I 0.376
Bra030021 Brassica rapa Bra030021 I 0.371
scaffold_601314.1 Arabidopsis lyrata scaffold_601314.1 I 0.369
Bra013412 Brassica rapa Bra013412 I 0.365
POPTR_0008s13620 Populus trichocarpa POPTR_0008s13620 I 0.364
Bra013406 Brassica rapa Bra013406 I 0.363
EuGene.0200010072 Micromonas sp RCC299 EuGene.0200010072 I 0.362
Bo1g007320 Brassica oleracea Bo1g007320 I 0.361
Bostr.26959s0010 Boechera stricta Bostr.26959s0010 I 0.347
HSF4 Felis catus ENSFCAG00000014099 I 0.346
BN946_scf185014.g98 Trametes cinnabarina BN946_scf185014.g98 I 0.346
Ca_00428 Cicer arietinum Ca_00428 I 0.345
gene23802-v1.0-hybrid Fragaria vesca gene23802-v1.0-hybrid I 0.345
HSF4 Dasypus novemcinctus ENSDNOG00000032363 I 0.344
Cagra.2848s0007 Capsella grandiflora Cagra.2848s0007 I 0.344
Bra029228 Brassica rapa Bra029228 N 0.344
SCLCIDRAFT_1218516 Scleroderma citrinum SCLCIDRAFT_1218516 I 0.344
HSF4 Homo sapiens ENSG00000102878 D 0.343
HSF4 Gorilla gorilla ENSGGOG00000011899 I 0.343
Hsf4 Mus musculus ENSMUSG00000033249 I 0.343
HSF4 Equus caballus ENSECAG00000016708 I 0.343
Hsf4 Dipodomys ordii ENSDORG00000015128 I 0.343
ENSPPYG00000007441 Pongo abelii ENSPPYG00000007441 I 0.343
ENSPANG00000005017 Papio anubis ENSPANG00000005017 I 0.343
HSF4 Macaca mulatta ENSMMUG00000005906 I 0.343
HSF4 Oryctolagus cuniculus ENSOCUG00000010001 I 0.343
HSF4 Otolemur garnettii ENSOGAG00000001391 I 0.343
HSF4 Ochotona princeps ENSOPRG00000015074 I 0.343
ENSNLEG00000004338 Nomascus leucogenys ENSNLEG00000004338 I 0.343
HSF4 Pan troglodytes ENSPTRG00000034007 I 0.343
ENSSTOG00000027009 Ictidomys tridecemlineatus ENSSTOG00000027009 I 0.343
HSF4 Tursiops truncatus ENSTTRG00000010241 I 0.343
ENSBTAP00000004568-D1 Bos grunniens ENSBTAP00000004568-D1 I 0.343
ENSOARG00000002740 Ovis aries ENSOARG00000002740 I 0.343
HSF4 Sus scrofa ENSSSCG00000002792 I 0.343
ENSAMEG00000017238 Ailuropoda melanoleuca ENSAMEG00000017238 I 0.343
ENSCSAG00000003768 Chlorocebus sabaeus ENSCSAG00000003768 I 0.343
HSF4 Pteropus vampyrus ENSPVAG00000000402 I 0.343
HSF4 Canis familiaris ENSCAFG00000020379 I 0.343
HSF4 Bos taurus ENSBTAG00000003514 I 0.343
ENSMPUG00000005418 Mustela putorius furo ENSMPUG00000005418 I 0.343
Carubv10007333m.g Capsella rubella Carubv10007333m.g I 0.342
MTR_8g105780 Medicago truncatula MTR_8g105780 I 0.342
Cagra.13025s0005 Capsella grandiflora Cagra.13025s0005 I 0.342
SapurV1A.0015s0620 Salix purpurea SapurV1A.0015s0620 I 0.342
AMSG_03636 Thecamonas trahens AMSG_03636 I 0.342
HSF4 Cavia porcellus ENSCPOG00000010834 I 0.342
HSF4 Myotis lucifugus ENSMLUG00000011083 I 0.342
Bostr.30275s0431 Boechera stricta Bostr.30275s0431 I 0.341
HSF4 Loxodonta africana ENSLAFG00000021984 I 0.341
Gorai.N013300 Gossypium raimondii Gorai.N013300 I 0.341
Eucgr.E02813 Eucalyptus grandis Eucgr.E02813 I 0.341
TCM_011279 Theobroma cacao TCM_011279 I 0.340
Bo7g106320 Brassica oleracea Bo7g106320 I 0.340
Bra012571 Brassica rapa Bra012571 I 0.340
evm.TU.supercontig_2.169 Carica papaya evm.TU.supercontig_2.169 I 0.339
cassava14764.m1 Manihot esculenta cassava14764.m1 I 0.339
GRMZM2G179802 Zea mays GRMZM2G179802 I 0.339
Bo1g021700 Brassica oleracea Bo1g021700 I 0.338
HSF4 Microcebus murinus ENSMICG00000007714 I 0.338
Lus10022083.g Linum usitatissimum Lus10022083.g I 0.337
Gorai.009G032300 Gossypium raimondii Gorai.009G032300 I 0.337
Carubv10027643m.g Capsella rubella Carubv10027643m.g I 0.337
Bo3g157380 Brassica oleracea Bo3g157380 I 0.337
MDP0000126826 Malus domestica MDP0000126826 I 0.337
estExt_Genewise1.C_310312 Physcomitrella patens estExt_Genewise1.C_310312 I 0.336
Hsf4 Rattus norvegicus ENSRNOG00000015253 I 0.335
Pm005887 Prunus mume Pm005887 I 0.335
gw1.42.207.1 Physcomitrella patens gw1.42.207.1 I 0.335
Bo6g106450 Brassica oleracea Bo6g106450 I 0.335
PRUPE_ppa006514mg Prunus persica PRUPE_ppa006514mg I 0.335
Bra004272 Brassica rapa Bra004272 I 0.335
cassava7697.valid.m1 Manihot esculenta cassava7697.valid.m1 I 0.335
Contig10723.0.g13 Oxytricha trifallax Contig10723.0.g13 I 0.334
Contig10067.0.g63 Oxytricha trifallax Contig10067.0.g63 I 0.334
VIT_10s0003g01770 Vitis vinifera VIT_10s0003g01770 I 0.334
mgf006947m Mimulus guttatus mgf006947m I 0.334
cassava24811.valid.m1 Manihot esculenta cassava24811.valid.m1 I 0.333
Bostr.30275s0365 Boechera stricta Bostr.30275s0365 I 0.333
AT-HSFA4A Arabidopsis lyrata fgenesh2_kg.7__2405__AT4G18880.1 I 0.333
Cagra.4306s0004 Capsella grandiflora Cagra.4306s0004 I 0.333
HSFA4A Arabidopsis thaliana AT4G18880 D 0.333
Carubv10004953m.g Capsella rubella Carubv10004953m.g I 0.333
PAXRUDRAFT_162335 Paxillus rubicundulus PAXRUDRAFT_162335 I 0.333
VIT_12s0028g01410 Vitis vinifera VIT_12s0028g01410 I 0.333
AT-HSFA8 Vitis vinifera VIT_01s0011g05970 I 0.333
Bra013358 Brassica rapa Bra013358 I 0.333
Bo1g020010 Brassica oleracea Bo1g020010 I 0.332
HSF4 Procavia capensis ENSPCAG00000013012 I 0.332
BRADI3G43710 Brachypodium distachyon BRADI3G43710 I 0.332
Ca_08627 Cicer arietinum Ca_08627 I 0.331
Thhalv10025409m.g Eutrema salsugineum Thhalv10025409m.g I 0.331
FOMPIDRAFT_1100359 Fomitopsis pinicola FOMPIDRAFT_1100359 I 0.331
PHLGIDRAFT_68835 Phlebiopsis gigantea PHLGIDRAFT_68835 I 0.331
Aquca_020_00446 Aquilegia coerulea Aquca_020_00446 I 0.331
POPTR_0011s06820 Populus trichocarpa POPTR_0011s06820 I 0.330
estExt_Genewise1.C_510007 Bigelowiella natans estExt_Genewise1.C_510007 I 0.330
orange1.1g015635m.g Citrus sinensis orange1.1g015635m.g I 0.330
GLYMA05G29470 Glycine max GLYMA05G29470 I 0.330
MTR_8g087540 Medicago truncatula MTR_8g087540 I 0.330
PK09831.1 Cannabis sativa PK09831.1 I 0.330
TCM_029630 Theobroma cacao TCM_029630 I 0.329
Gorai.011G036400 Gossypium raimondii Gorai.011G036400 I 0.329
Ca_10406 Cicer arietinum Ca_10406 I 0.328
GLYMA08G12630 Glycine max GLYMA08G12630 I 0.328
Lus10007318.g Linum usitatissimum Lus10007318.g I 0.328
OGLUM02G17550 Oryza glumaepatula OGLUM02G17550 I 0.327
Pm010169 Prunus mume Pm010169 I 0.327
PRUPE_ppa006534mg Prunus persica PRUPE_ppa006534mg I 0.327
F775_00937 Aegilops tauschii F775_00937 I 0.327
BGIOSGA006438 Oryza indica BGIOSGA006438 I 0.327
Carubv10014950m.g Capsella rubella Carubv10014950m.g N 0.327
FIBRA_02011 Fibroporia radiculosa FIBRA_02011 I 0.327
LPERR02G13860 Leersia perrieri LPERR02G13860 I 0.327
OMERI02G17330 Oryza meridionalis OMERI02G17330 I 0.327
ORUFI02G18130 Oryza rufipogon ORUFI02G18130 I 0.327
AMSG_01638 Thecamonas trahens AMSG_01638 I 0.327
Solyc06g053960.2 Solanum lycopersicum Solyc06g053960.2 I 0.327
Traes_6AS_1537629B3 Triticum aestivum Traes_6AS_1537629B3 I 0.327
HSFA5 Oryza sativa OS02G0496100 I 0.327
ONIVA02G18700 Oryza nivara ONIVA02G18700 I 0.327
mgf006143m Mimulus guttatus mgf006143m I 0.326
Bo2g056350 Brassica oleracea Bo2g056350 I 0.326
hsf1 Danio rerio ENSDARG00000008818 I 0.325
Lus10005420.g Linum usitatissimum Lus10005420.g I 0.325
PISMIDRAFT_106875 Pisolithus microcarpus PISMIDRAFT_106875 I 0.325
fgenesh1_pg.C_scaffold_7000870 Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000870 I 0.325
GLOTRDRAFT_35422 Gloeophyllum trabeum GLOTRDRAFT_35422 I 0.325
Si019082m.g Setaria italica Si019082m.g I 0.325
M404DRAFT_154909 Pisolithus tinctorius M404DRAFT_154909 I 0.325
LPERR03G28330 Leersia perrieri LPERR03G28330 I 0.325
OPUNC02G15430 Oryza punctata OPUNC02G15430 I 0.325
Lus10015237.g Linum usitatissimum Lus10015237.g I 0.325
RO3G_10499 Rhizopus oryzae RO3G_10499 I 0.324
OB01G39790 Oryza brachyantha OB01G39790 I 0.324
chr4.CM0046.500.nc Lotus japonicus chr4.CM0046.500.nc I 0.324
Eucgr.A01948 Eucalyptus grandis Eucgr.A01948 I 0.324
GLYMA16G13400 Glycine max GLYMA16G13400 I 0.324
Gorai.010G240800 Gossypium raimondii Gorai.010G240800 I 0.323
Lus10006618.g Linum usitatissimum Lus10006618.g I 0.323
Eucgr.C00873 Eucalyptus grandis Eucgr.C00873 I 0.323
Carubv10021131m.g Capsella rubella Carubv10021131m.g I 0.323
PGSC0003DMG400016270 Solanum tuberosum PGSC0003DMG400016270 I 0.323
OPUNC01G15930 Oryza punctata OPUNC01G15930 I 0.323
GLYMA13G29760 Glycine max GLYMA13G29760 I 0.323
Solyc07g040680.2 Solanum lycopersicum Solyc07g040680.2 I 0.323
e_gw.355.83.1 Branchiostoma floridae e_gw.355.83.1 N 0.323
e_gw.355.85.1 Branchiostoma floridae e_gw.355.85.1 N 0.323
Cagra.0096s0075 Capsella grandiflora Cagra.0096s0075 I 0.323
Sb04g020050 Sorghum bicolor Sb04g020050 I 0.322
Sb03g034630 Sorghum bicolor Sb03g034630 I 0.322
Lus10029269.g Linum usitatissimum Lus10029269.g I 0.322
GRMZM2G118453 Zea mays GRMZM2G118453 I 0.322
PGSC0003DMG400028414 Solanum tuberosum PGSC0003DMG400028414 I 0.322
XP_002942927 Xenopus tropicalis XP_002942927 I 0.322
chr6.CM0118.920.nd Lotus japonicus chr6.CM0118.920.nd I 0.322
hsf1.S Xenopus laevis XB-GENE-997146 I 0.322
hsf1 Xenopus laevis XB-GENE-997145 I 0.322
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N 0.322
V565_116890 Rhizoctonia solani V565_116890 I 0.322
HSF1 Anolis carolinensis ENSACAG00000012604 I 0.322
SapurV1A.0086s0550 Salix purpurea SapurV1A.0086s0550 I 0.321
CHLREDRAFT_117914 Chlamydomonas reinhardtii CHLREDRAFT_117914 I 0.321
Pavir.Eb03132 Panicum virgatum Pavir.Eb03132 I 0.321
PGSC0003DMG400032793 Solanum tuberosum PGSC0003DMG400032793 I 0.321
e_gw1.6.1274.1 Mucor circinelloides e_gw1.6.1274.1 I 0.321
TCM_037635 Theobroma cacao TCM_037635 I 0.321
Solyc02g072000.2 Solanum lycopersicum Solyc02g072000.2 I 0.321
Solyc09g082670.2 Solanum lycopersicum Solyc09g082670.2 I 0.321
SERLA73DRAFT_60481 Serpula lacrymans SERLA73DRAFT_60481 I 0.321
Si001439m.g Setaria italica Si001439m.g I 0.321
LDEC001032 Leptinotarsa decemlineata LDEC001032 I 0.320
29968.m000635 Ricinus communis 29968.m000635 I 0.320
OB03G40890 Oryza brachyantha OB03G40890 I 0.320
OPUNC03G31000 Oryza punctata OPUNC03G31000 I 0.320
e_gw1.1.2474.1 Mucor circinelloides e_gw1.1.2474.1 I 0.320
ENSLOCG00000007411 Lepisosteus oculatus ENSLOCG00000007411 I 0.320
Gorai.007G033300 Gossypium raimondii Gorai.007G033300 I 0.320
BRADI2G49860 Brachypodium distachyon BRADI2G49860 I 0.319
ENSLACG00000013265 Latimeria chalumnae ENSLACG00000013265 I 0.319
Eucgr.L01331 Eucalyptus grandis Eucgr.L01331 I 0.319
29739.m003565 Ricinus communis 29739.m003565 I 0.319