LPERR05G13240 (Leersia perrieri)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 LPERR05G13240 T245403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD6
M06955_2.00 		Arabidopsis thaliana
CGSCGGNDDHDRCGGMGRHDN
NHDYCKCCGYHDHHNCCGSCG		 Dap-seq
OMalley et al.(2016)
AS2_col_a 		0.763 0.763
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR05G13240.1 LOB 53 149

Links

Other LOB family TFs
Other Leersia perrieri TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.985
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.889
PK18922.1 Cannabis sativa PK18922.1 I 0.877
GSMUA_Achr11G26500_001 Musa acuminata GSMUA_Achr11G26500_001 I 0.864
GSMUA_Achr5G25770_001 Musa acuminata GSMUA_Achr5G25770_001 I 0.864
OLONG_016086 Oryza longistaminata OLONG_016086 I 0.825
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I 0.825
OMERI01G36900 Oryza meridionalis OMERI01G36900 I 0.825
LPERR01G34430 Leersia perrieri LPERR01G34430 I 0.825
OB01G48740 Oryza brachyantha OB01G48740 I 0.825
OBART01G39990 Oryza barthii OBART01G39990 I 0.825
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I 0.825
TRIUR3_32863 Triticum urartu TRIUR3_32863 I 0.825
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.825
Si002599m.g Setaria italica Si002599m.g I 0.825
LBD6 Oryza sativa OS01G0889400 I 0.825
OPUNC01G38680 Oryza punctata OPUNC01G38680 I 0.825
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I 0.825
ONIVA01G44840 Oryza nivara ONIVA01G44840 I 0.825
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.825
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.825
LBD6 Oryza indica BGIOSGA004955 I 0.825
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.814
F775_21760 Aegilops tauschii F775_21760 I 0.814
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.814
Pavir.J03238 Panicum virgatum Pavir.J03238 I 0.814
F775_20715 Aegilops tauschii F775_20715 I 0.808
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.808
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.808
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.808
Pavir.J03307 Panicum virgatum Pavir.J03307 I 0.808
Sb09g020440 Sorghum bicolor Sb09g020440 I 0.808
OS05G0417000 Oryza sativa OS05G0417000 I 0.808
TRAES3BF084400010CFD_g Triticum aestivum TRAES3BF084400010CFD_g I 0.808
MLOC_72525 Hordeum vulgare MLOC_72525 I 0.808
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.808
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.808
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.804
OB05G24560 Oryza brachyantha OB05G24560 I 0.798
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I 0.798
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 0.794
Si024114m.g Setaria italica Si024114m.g I 0.788
F775_33210 Aegilops tauschii F775_33210 I 0.781
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.778
GRMZM2G133806 Zea mays GRMZM2G133806 I 0.773
Cla005851 Citrullus lanatus Cla005851 I 0.763
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.763
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.763
TCM_024217 Theobroma cacao TCM_024217 I 0.763
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.763
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.763
29929.m004500 Ricinus communis 29929.m004500 I 0.763
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.763
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.758
mgf014755m Mimulus guttatus mgf014755m I 0.753
MDP0000643326 Malus domestica MDP0000643326 I 0.753
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.747
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.747
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.747
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.747
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.747
MDP0000273432 Malus domestica MDP0000273432 I 0.747
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.747
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.747
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.747
Bo2g051420 Brassica oleracea Bo2g051420 I 0.747
LBD6 Arabidopsis thaliana AT1G65620 D 0.747
Bra039733 Brassica rapa Bra039733 I 0.747
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.747
AS2 Vitis vinifera VIT_00s0340g00090 I 0.747
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.747
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.742
Aquca_058_00006 Aquilegia coerulea Aquca_058_00006 I 0.737
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.737
MDP0000133546 Malus domestica MDP0000133546 I 0.737
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.732
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.732
Ca_20200 Cicer arietinum Ca_20200 I 0.732
GRMZM2G096064 Zea mays GRMZM2G096064 I 0.732
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.732
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.727
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.727
GSMUA_Achr3G21730_001 Musa acuminata GSMUA_Achr3G21730_001 N 0.722
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.717
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.717
GLYMA11G17890 Glycine max GLYMA11G17890 I 0.707
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.707
TCM_000560 Theobroma cacao TCM_000560 I 0.701
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I 0.701
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.701