CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr2G18410_001
(
Musa acuminata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GSMUA_Achr2G18410_001
T254365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr2P18410_001
MADS box
10
40
WIANDSMRRATFKKRKMGLMKKVNKLAMLCI
Links
Other
MADS box
family TFs
Other
Musa acuminata
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr2G18400_001
Musa acuminata
GSMUA_Achr2G18400_001
N
0.806
Aquca_007_00647
Aquilegia coerulea
Aquca_007_00647
I
0.774
Aquca_027_00068
Aquilegia coerulea
Aquca_027_00068
I
0.774
GSMUA_Achr3G08500_001
Musa acuminata
GSMUA_Achr3G08500_001
N
0.742
Pavir.J14267
Panicum virgatum
Pavir.J14267
N
0.742
GRMZM5G853066
Zea mays
GRMZM5G853066
N
0.742
GRMZM5G839969
Zea mays
GRMZM5G839969
N
0.742
Thhalv10024119m.g
Eutrema salsugineum
Thhalv10024119m.g
I
0.710
PDK_20s1688321g001
Phoenix dactylifera
PDK_20s1688321g001
N
0.710
Pavir.Ib03850
Panicum virgatum
Pavir.Ib03850
N
0.710
Thhalv10023873m.g
Eutrema salsugineum
Thhalv10023873m.g
I
0.710
Thhalv10012000m.g
Eutrema salsugineum
Thhalv10012000m.g
I
0.710
Bostr.2392s0039
Boechera stricta
Bostr.2392s0039
I
0.710
Si019470m.g
Setaria italica
Si019470m.g
N
0.710
Bra018490
Brassica rapa
Bra018490
I
0.710
Bo9g078450
Brassica oleracea
Bo9g078450
I
0.710
Bra029469
Brassica rapa
Bra029469
I
0.710
GLYMA18G04760
Glycine max
GLYMA18G04760
I
0.710
Al_scaffold_0003_569
Arabidopsis lyrata
Al_scaffold_0003_569
I
0.710
Aquca_003_00269
Aquilegia coerulea
Aquca_003_00269
N
0.710