Aquca_007_00647 (Aquilegia coerulea)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Aquca_007_00647 T257507_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_007_00647.1 MADS box 10 54

Links

Other MADS box family TFs
Other Aquilegia coerulea TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.978
Aquca_003_00269 Aquilegia coerulea Aquca_003_00269 N 0.844
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N 0.841
Aquca_003_00270 Aquilegia coerulea Aquca_003_00270 N 0.822
Aquca_003_00271 Aquilegia coerulea Aquca_003_00271 N 0.822
Aquca_003_00272 Aquilegia coerulea Aquca_003_00272 N 0.822
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I 0.822
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.822
Aquca_029_00010 Aquilegia coerulea Aquca_029_00010 N 0.800
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.800
Si019470m.g Setaria italica Si019470m.g N 0.786
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I 0.783
Cla005226 Citrullus lanatus Cla005226 I 0.778
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.778
Pm004396 Prunus mume Pm004396 I 0.778
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.778
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.778
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.778
GSMUA_Achr2G18410_001 Musa acuminata GSMUA_Achr2G18410_001 N 0.774
Ca_08934 Cicer arietinum Ca_08934 I 0.773
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I 0.773
Ca_06495 Cicer arietinum Ca_06495 I 0.773
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I 0.773
LjSGA_104570.1 Lotus japonicus LjSGA_104570.1 I 0.759
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.756
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.756
MDP0000925348 Malus domestica MDP0000925348 I 0.756
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.756
Ca_13275 Cicer arietinum Ca_13275 I 0.756
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.750
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.750
mgf026186m Mimulus guttatus mgf026186m I 0.750
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.750
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.745
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.739
evm.TU.contig_37084 Carica papaya evm.TU.contig_37084 I 0.739
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.739
TCM_026842 Theobroma cacao TCM_026842 I 0.733
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.733
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.733
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.733
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.733
GRMZM5G839969 Zea mays GRMZM5G839969 N 0.733
MTR_4g028800 Medicago truncatula MTR_4g028800 N 0.732
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.729
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.729
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I 0.727
evm.TU.supercontig_1750.1 Carica papaya evm.TU.supercontig_1750.1 I 0.727
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.727
30199.m000879 Ricinus communis 30199.m000879 I 0.723
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.723
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.723
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I 0.721
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.721
MTR_7g055940 Medicago truncatula MTR_7g055940 N 0.720
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I 0.717
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I 0.714
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.711
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.711
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.711
MTR_4g032260 Medicago truncatula MTR_4g032260 N 0.711
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.711
Pavir.Eb00487 Panicum virgatum Pavir.Eb00487 N 0.711
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N 0.711
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.711
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N 0.711
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.708
MTR_7g055800 Medicago truncatula MTR_7g055800 N 0.708
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.708
MTR_8g036130 Medicago truncatula MTR_8g036130 N 0.705
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I 0.704
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N 0.702
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.702