Eucgr.E01734 (Eucalyptus grandis)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00319 (SRF-TF) IPR002100 Eucgr.E01734 T257948_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.761 0.761
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.E01734.1 MADS box 10 56

Links

Other MADS box family TFs
Other Eucalyptus grandis TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.957
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.935
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I 0.935
GLYMA11G33460 Glycine max GLYMA11G33460 I 0.867
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.848
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.826
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.826
30199.m000879 Ricinus communis 30199.m000879 I 0.826
Cla005226 Citrullus lanatus Cla005226 I 0.822
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.804
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.804
TCM_026842 Theobroma cacao TCM_026842 I 0.783
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.783
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.783
Ca_13275 Cicer arietinum Ca_13275 I 0.783
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.783
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.783
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.783
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.783
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.783
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.771
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.761
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.761
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.761
Lus10022316.g Linum usitatissimum Lus10022316.g I 0.761
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.761
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.761
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I 0.761
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.761
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.761
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.756
Pm004396 Prunus mume Pm004396 I 0.756
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.756
PRUPE_ppa017207mg Prunus persica PRUPE_ppa017207mg N 0.756
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.750
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.750
Bra029469 Brassica rapa Bra029469 I 0.739
MDP0000846004 Malus domestica MDP0000846004 I 0.739
Bo9g078450 Brassica oleracea Bo9g078450 I 0.739
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.739
MDP0000925348 Malus domestica MDP0000925348 I 0.739
Lus10014883.g Linum usitatissimum Lus10014883.g I 0.739
Bra018490 Brassica rapa Bra018490 I 0.739
Ca_06495 Cicer arietinum Ca_06495 I 0.739
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.739
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.739
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.739
AGL80 Arabidopsis thaliana AT5G48670 D 0.729
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.717
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.717
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.717
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I 0.717
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.717
Bo2g104810 Brassica oleracea Bo2g104810 I 0.717
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.717
Pm003257 Prunus mume Pm003257 I 0.717
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.717
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.711
30128.m008984 Ricinus communis 30128.m008984 I 0.708