GLYMA11G33460 (Glycine max)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GLYMA11G33460 T254191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGL80
M06994_2.00 		Arabidopsis thaliana
TCACCA
TGGTGA		 Dap-seq
OMalley et al.(2016)
FEM111_col_a 		0.800 0.800
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA11G33460.1 MADS box 10 55

Links

Other MADS box family TFs
Other Glycine max TFs

104 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA18G04760 Glycine max GLYMA18G04760 I 0.978
MTR_3g065100 Medicago truncatula MTR_3g065100 I 0.933
Ca_13275 Cicer arietinum Ca_13275 I 0.933
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I 0.911
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I 0.911
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I 0.889
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I 0.889
Cla005226 Citrullus lanatus Cla005226 I 0.867
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I 0.867
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I 0.867
Lus10014578.g Linum usitatissimum Lus10014578.g I 0.867
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I 0.844
Lus10032108.g Linum usitatissimum Lus10032108.g I 0.844
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I 0.844
30199.m000879 Ricinus communis 30199.m000879 I 0.844
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I 0.844
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I 0.844
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I 0.844
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I 0.844
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I 0.826
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I 0.822
Pm004396 Prunus mume Pm004396 I 0.822
Bra029469 Brassica rapa Bra029469 I 0.822
Bo9g078450 Brassica oleracea Bo9g078450 I 0.822
MDP0000925348 Malus domestica MDP0000925348 I 0.822
Bra018490 Brassica rapa Bra018490 I 0.822
Cucsa.050930 Cucumis sativus Cucsa.050930 I 0.822
Ca_06495 Cicer arietinum Ca_06495 I 0.822
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I 0.822
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I 0.822
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I 0.822
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I 0.822
TCM_026842 Theobroma cacao TCM_026842 I 0.822
cassava19828.m1 Manihot esculenta cassava19828.m1 I 0.812
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I 0.800
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I 0.800
MDP0000846004 Malus domestica MDP0000846004 I 0.800
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I 0.800
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I 0.800
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I 0.800
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I 0.800
Bo2g104810 Brassica oleracea Bo2g104810 I 0.800
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I 0.800
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I 0.792
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I 0.792
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I 0.783
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I 0.783
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I 0.778
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I 0.778
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.778
Thhalv10019481m.g Eutrema salsugineum Thhalv10019481m.g I 0.778
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I 0.778
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I 0.778
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I 0.778
cassava15247.m1 Manihot esculenta cassava15247.m1 I 0.778
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I 0.756
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I 0.756
TCM_025670 Theobroma cacao TCM_025670 I 0.756
GLYMA18G05916 Glycine max GLYMA18G05916 N 0.756
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I 0.756
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I 0.756
mgf026186m Mimulus guttatus mgf026186m I 0.756
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.756
Lus10022316.g Linum usitatissimum Lus10022316.g I 0.756
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I 0.756
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I 0.756
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I 0.756
30128.m008984 Ricinus communis 30128.m008984 I 0.750
AGL80 Arabidopsis thaliana AT5G48670 D 0.750
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I 0.733
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I 0.733
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I 0.733
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I 0.733
Lus10014883.g Linum usitatissimum Lus10014883.g I 0.733
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I 0.733
MTR_4g031910 Medicago truncatula MTR_4g031910 N 0.733
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I 0.733
TCM_025671 Theobroma cacao TCM_025671 I 0.733
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.733
GLYMA18G05990 Glycine max GLYMA18G05990 N 0.733
Bo5g145000 Brassica oleracea Bo5g145000 I 0.733
Bra041022 Brassica rapa Bra041022 I 0.733
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I 0.733
Pm003257 Prunus mume Pm003257 I 0.733
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I 0.733
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I 0.729
Carubv10014232m.g Capsella rubella Carubv10014232m.g I 0.729
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I 0.711
MTR_2g035610 Medicago truncatula MTR_2g035610 N 0.711
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I 0.711
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I 0.711
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I 0.711
gene15899-v1.0-hybrid Fragaria vesca gene15899-v1.0-hybrid N 0.711
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I 0.711
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.711
TCM_026845 Theobroma cacao TCM_026845 I 0.711
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I 0.711
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I 0.711
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I 0.711
Cla009163 Citrullus lanatus Cla009163 I 0.711
Ca_08934 Cicer arietinum Ca_08934 I 0.711
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I 0.711
TCM_042799 Theobroma cacao TCM_042799 I 0.711
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I 0.711