BRADI1G32720 (Brachypodium distachyon)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 BRADI1G32720 T268178_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.697 0.720
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.697 0.720
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.680 0.710
myb.Ph3
M02704_2.00 		Petunia x hybrida
WAACNGTYW
WRACNGTTW		 SELEX
Mathelier et al.(2014)
MA0054.1 		0.661 0.720
myb.Ph3
M11070_2.00 		Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY		 Transfac
Matys et al.(2006)
P$MYBPH3_01 		0.661 0.720
myb.Ph3
M11071_2.00 		Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS		 Transfac
Matys et al.(2006)
P$MYBPH3_02 		0.661 0.720
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G32720.1 Myb 27 74
BRADI1G32720.1 Myb 80 125

Links

Other Myb/SANT family TFs
Other Brachypodium distachyon TFs

185 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_17146 Triticum urartu TRIUR3_17146 I 0.889
Traes_7DL_FAF2AE9FB Triticum aestivum Traes_7DL_FAF2AE9FB I 0.889
F775_00954 Aegilops tauschii F775_00954 I 0.889
Traes_7AL_0AD4A7A87 Triticum aestivum Traes_7AL_0AD4A7A87 I 0.889
Pavir.Db00593 Panicum virgatum Pavir.Db00593 I 0.833
Si006555m.g Setaria italica Si006555m.g I 0.833
OS06G0679400 Oryza sativa OS06G0679400 I 0.829
ONIVA06G28020 Oryza nivara ONIVA06G28020 I 0.829
OGLUM06G26120 Oryza glumaepatula OGLUM06G26120 I 0.829
OMERI06G24960 Oryza meridionalis OMERI06G24960 I 0.829
ORUFI06G26670 Oryza rufipogon ORUFI06G26670 I 0.829
OPUNC06G22490 Oryza punctata OPUNC06G22490 I 0.829
BGIOSGA020673 Oryza indica BGIOSGA020673 I 0.829
Pavir.Da00077 Panicum virgatum Pavir.Da00077 I 0.822
Sb10g027280 Sorghum bicolor Sb10g027280 I 0.818
LPERR06G20610 Leersia perrieri LPERR06G20610 I 0.794
GRMZM2G161512 Zea mays GRMZM2G161512 N 0.779
Traes_6DS_A0EC5D808 Triticum aestivum Traes_6DS_A0EC5D808 I 0.772
TRIUR3_22706 Triticum urartu TRIUR3_22706 I 0.772
Traes_6AS_5562B97F7 Triticum aestivum Traes_6AS_5562B97F7 I 0.772
F775_14392 Aegilops tauschii F775_14392 I 0.772
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.748
MYB101 Vitis vinifera VIT_12s0059g00700 I 0.743
MDP0000147309 Malus domestica MDP0000147309 I 0.737
Si039629m.g Setaria italica Si039629m.g I 0.732
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.732
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.731
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.731
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.731
OS03G0578900 Oryza sativa OS03G0578900 I 0.731
OBART03G24120 Oryza barthii OBART03G24120 I 0.731
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.731
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.731
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.731
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.731
Lus10021539.g Linum usitatissimum Lus10021539.g I 0.726
MDP0000308617 Malus domestica MDP0000308617 I 0.724
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.724
Lus10040063.g Linum usitatissimum Lus10040063.g I 0.717
Gorai.007G312700 Gossypium raimondii Gorai.007G312700 I 0.716
mgf019173m Mimulus guttatus mgf019173m I 0.710
mgf010934m Mimulus guttatus mgf010934m I 0.710
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I 0.710
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I 0.708
GRMZM2G343068 Zea mays GRMZM2G343068 N 0.708
OB03G32840 Oryza brachyantha OB03G32840 I 0.706
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.702
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.702
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.702
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.702
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I 0.700
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I 0.700
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I 0.700
MDP0000179306 Malus domestica MDP0000179306 I 0.700
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.698
F775_23034 Aegilops tauschii F775_23034 I 0.698
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.697
F775_28392 Aegilops tauschii F775_28392 I 0.697
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.697
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.697
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.697
Gam1 Hordeum vulgare Q96464_HORVU D 0.697
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.697
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.697
Cla005406 Citrullus lanatus Cla005406 I 0.696
Lus10027189.g Linum usitatissimum Lus10027189.g I 0.694
Lus10035275.g Linum usitatissimum Lus10035275.g I 0.694
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.693
PRUPE_ppa017451mg Prunus persica PRUPE_ppa017451mg I 0.693
Gorai.013G159200 Gossypium raimondii Gorai.013G159200 I 0.693
Pm015094 Prunus mume Pm015094 I 0.693
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.693
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.693
MDP0000151688 Malus domestica MDP0000151688 I 0.693
MDP0000176798 Malus domestica MDP0000176798 I 0.693
cassava11031.m1 Manihot esculenta cassava11031.m1 I 0.691
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.691
Aquca_005_00025 Aquilegia coerulea Aquca_005_00025 I 0.691
GSMUA_Achr7G13700_001 Musa acuminata GSMUA_Achr7G13700_001 I 0.690
TCM_030853 Theobroma cacao TCM_030853 I 0.688
Gorai.002G089900 Gossypium raimondii Gorai.002G089900 I 0.688
Si000907m.g Setaria italica Si000907m.g I 0.688
Pm016605 Prunus mume Pm016605 I 0.688
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I 0.688
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I 0.688
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.688
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I 0.688
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.688
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I 0.688
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.687
LPERR03G20110 Leersia perrieri LPERR03G20110 I 0.687
PGSC0003DMG400013897 Solanum tuberosum PGSC0003DMG400013897 I 0.686
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.685
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I 0.684
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I 0.684
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.684
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I 0.684
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.684
MDP0000175835 Malus domestica MDP0000175835 I 0.683
PRUPE_ppa022465mg Prunus persica PRUPE_ppa022465mg I 0.682
Bostr.26833s0761 Boechera stricta Bostr.26833s0761 I 0.681
Cagra.1629s0073 Capsella grandiflora Cagra.1629s0073 I 0.681
Carubv10026070m.g Capsella rubella Carubv10026070m.g I 0.681
Thhalv10013018m.g Eutrema salsugineum Thhalv10013018m.g I 0.681
Bra002938 Brassica rapa Bra002938 I 0.681
Bo9g119060 Brassica oleracea Bo9g119060 I 0.681
ATMYB120 Arabidopsis thaliana AT5G55020 I 0.681
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.680
OBART01G34660 Oryza barthii OBART01G34660 I 0.680
OB01G43550 Oryza brachyantha OB01G43550 I 0.680
GAM1 Oryza indica BGIOSGA004670 I 0.680
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.680
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.680
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.680
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I 0.680
GAMYB Oryza sativa OS01G0812000 I 0.680
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I 0.680
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.680
mgf002965m Mimulus guttatus mgf002965m I 0.679
VIT_06s0009g02480 Vitis vinifera VIT_06s0009g02480 I 0.679
MYB97 Arabidopsis thaliana AT4G26930 I 0.679
Eucgr.A01122 Eucalyptus grandis Eucgr.A01122 I 0.679
MYB97 Arabidopsis lyrata fgenesh2_kg.7__1539__AT4G26930.1 I 0.679
Pavir.Ab00447 Panicum virgatum Pavir.Ab00447 I 0.678
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.678
Cucsa.060080 Cucumis sativus Cucsa.060080 I 0.678
Solyc07g052300.2 Solanum lycopersicum Solyc07g052300.2 I 0.678
PGSC0003DMG400028949 Solanum tuberosum PGSC0003DMG400028949 I 0.678
mgf020500m Mimulus guttatus mgf020500m I 0.676
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.675
F775_08967 Aegilops tauschii F775_08967 I 0.675
TRIUR3_15006 Triticum urartu TRIUR3_15006 I 0.675
PRUPE_ppa019943mg Prunus persica PRUPE_ppa019943mg I 0.675
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.674
GLYMA08G42920 Glycine max GLYMA08G42920 I 0.673
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I 0.671
SapurV1A.0369s0230 Salix purpurea SapurV1A.0369s0230 I 0.671
MYB33 Arabidopsis lyrata fgenesh2_kg.6__546__AT5G06100.3 I 0.671
Sb03g037680 Sorghum bicolor Sb03g037680 I 0.671
POPTR_0001s07330 Populus trichocarpa POPTR_0001s07330 I 0.671
Lus10008685.g Linum usitatissimum Lus10008685.g I 0.671
Lus10026142.g Linum usitatissimum Lus10026142.g I 0.671
POPTR_0003s18900 Populus trichocarpa POPTR_0003s18900 I 0.671
Gorai.010G212500 Gossypium raimondii Gorai.010G212500 I 0.671
TCM_044611 Theobroma cacao TCM_044611 I 0.671
evm.TU.supercontig_33.151 Carica papaya evm.TU.supercontig_33.151 I 0.671
cassava1461.valid.m1 Manihot esculenta cassava1461.valid.m1 I 0.671
MTR_8g042410 Medicago truncatula MTR_8g042410 I 0.671
MTR_3g052430 Medicago truncatula MTR_3g052430 I 0.671
cassava44767.m1 Manihot esculenta cassava44767.m1 I 0.671
MTR_1g021230 Medicago truncatula MTR_1g021230 I 0.671
Cucsa.364400 Cucumis sativus Cucsa.364400 I 0.671
29686.m000890 Ricinus communis 29686.m000890 I 0.671
Ca_25013 Cicer arietinum Ca_25013 I 0.671
Cla013880 Citrullus lanatus Cla013880 I 0.671
Pm011812 Prunus mume Pm011812 I 0.667
LjSGA_057622.2 Lotus japonicus LjSGA_057622.2 I 0.667
Gorai.009G301100 Gossypium raimondii Gorai.009G301100 I 0.667
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.666
Ca_20081 Cicer arietinum Ca_20081 I 0.666
29823.m000215 Ricinus communis 29823.m000215 I 0.666
Pavir.Da00534 Panicum virgatum Pavir.Da00534 I 0.664
Thhalv10013329m.g Eutrema salsugineum Thhalv10013329m.g I 0.664
TCM_041010 Theobroma cacao TCM_041010 I 0.664
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I 0.664
cassava30977.valid.m1 Manihot esculenta cassava30977.valid.m1 I 0.664
Sb10g023665 Sorghum bicolor Sb10g023665 I 0.664
TCM_011907 Theobroma cacao TCM_011907 I 0.664
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I 0.664
OPUNC06G18670 Oryza punctata OPUNC06G18670 I 0.664
gw1.238.44.1 Physcomitrella patens gw1.238.44.1 I 0.664
Carubv10000715m.g Capsella rubella Carubv10000715m.g I 0.664
MTR_3g011610 Medicago truncatula MTR_3g011610 I 0.664
Cagra.2117s0052 Capsella grandiflora Cagra.2117s0052 I 0.664
Bostr.13129s0364 Boechera stricta Bostr.13129s0364 I 0.664
gw1.66.160.1 Physcomitrella patens gw1.66.160.1 I 0.664
Si007070m.g Setaria italica Si007070m.g I 0.664
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.663
Bra028997 Brassica rapa Bra028997 I 0.662
Bo3g021790 Brassica oleracea Bo3g021790 I 0.662
Gorai.006G121900 Gossypium raimondii Gorai.006G121900 I 0.662
PK15478.1 Cannabis sativa PK15478.1 I 0.662
Gorai.012G022000 Gossypium raimondii Gorai.012G022000 I 0.662
myb.Ph3 Petunia x hybrida Q02994_PETHY D 0.661
e_gw1.6.239.1 Physcomitrella patens e_gw1.6.239.1 I 0.661