CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si006555m.g
(
Setaria italica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
Si006555m.g
T279723_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.691
0.763
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.691
0.763
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.674
0.753
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.671
0.731
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.671
0.731
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.671
0.731
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.669
0.710
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.669
0.710
AtMYB81
M07049_2.00
Arabidopsis thaliana
VTAACNGHWWH
DWWDCNGTTAB
Dap-seq
OMalley et al.(2016)
MYB81_col_a
0.668
0.688
AtMYB81
M07050_2.00
Arabidopsis thaliana
DHHNYAACBGHWWH
DWWDCVGTTRNDDH
Dap-seq
OMalley et al.(2016)
MYB81_colamp_a
0.668
0.688
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.667
0.710
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si006555m
Myb
19
66
KGPWTQAEDKLLVDHVRRHGEGNWNAVRRETGLQRCGKSCRLRWANHL
Si006555m
Myb
72
117
KGPFSPEEERQILRLHGLIGNKWARISSHLPGRTDNEIKNYWNTRL
Links
Other
Myb/SANT
family TFs
Other
Setaria italica
TFs
191 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Db00593
Panicum virgatum
Pavir.Db00593
I
0.909
Pavir.Da00077
Panicum virgatum
Pavir.Da00077
I
0.898
Sb10g027280
Sorghum bicolor
Sb10g027280
I
0.870
OPUNC06G22490
Oryza punctata
OPUNC06G22490
I
0.856
OGLUM06G26120
Oryza glumaepatula
OGLUM06G26120
I
0.856
ORUFI06G26670
Oryza rufipogon
ORUFI06G26670
I
0.856
OS06G0679400
Oryza sativa
OS06G0679400
I
0.856
BGIOSGA020673
Oryza indica
BGIOSGA020673
I
0.856
ONIVA06G28020
Oryza nivara
ONIVA06G28020
I
0.856
OMERI06G24960
Oryza meridionalis
OMERI06G24960
I
0.856
GRMZM2G161512
Zea mays
GRMZM2G161512
N
0.852
LPERR06G20610
Leersia perrieri
LPERR06G20610
I
0.846
BRADI1G32720
Brachypodium distachyon
BRADI1G32720
I
0.833
TRIUR3_17146
Triticum urartu
TRIUR3_17146
I
0.832
Traes_7AL_0AD4A7A87
Triticum aestivum
Traes_7AL_0AD4A7A87
I
0.832
F775_00954
Aegilops tauschii
F775_00954
I
0.832
Traes_7DL_FAF2AE9FB
Triticum aestivum
Traes_7DL_FAF2AE9FB
I
0.832
Traes_6DS_A0EC5D808
Triticum aestivum
Traes_6DS_A0EC5D808
I
0.790
TRIUR3_22706
Triticum urartu
TRIUR3_22706
I
0.790
F775_14392
Aegilops tauschii
F775_14392
I
0.790
Traes_6AS_5562B97F7
Triticum aestivum
Traes_6AS_5562B97F7
I
0.790
GRMZM2G343068
Zea mays
GRMZM2G343068
N
0.756
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.737
Pavir.Ib03827
Panicum virgatum
Pavir.Ib03827
I
0.726
Si039629m.g
Setaria italica
Si039629m.g
I
0.726
MLOC_6041
Hordeum vulgare
MLOC_6041
I
0.720
F775_23034
Aegilops tauschii
F775_23034
I
0.717
TRIUR3_20797
Triticum urartu
TRIUR3_20797
I
0.717
MDP0000147309
Malus domestica
MDP0000147309
I
0.716
GSMUA_Achr7G00280_001
Musa acuminata
GSMUA_Achr7G00280_001
I
0.710
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.707
Gorai.007G312700
Gossypium raimondii
Gorai.007G312700
I
0.706
Lus10035275.g
Linum usitatissimum
Lus10035275.g
I
0.704
Lus10027189.g
Linum usitatissimum
Lus10027189.g
I
0.704
OB03G32840
Oryza brachyantha
OB03G32840
I
0.700
ONIVA04G15310
Oryza nivara
ONIVA04G15310
I
0.700
OMERI03G21920
Oryza meridionalis
OMERI03G21920
I
0.700
OBART03G24120
Oryza barthii
OBART03G24120
I
0.700
ORUFI03G24730
Oryza rufipogon
ORUFI03G24730
I
0.700
OLONG_025057
Oryza longistaminata
OLONG_025057
I
0.700
OS03G0578900
Oryza sativa
OS03G0578900
I
0.700
ORGLA03G0224700
Oryza glaberrima
ORGLA03G0224700
I
0.700
OPUNC03G22220
Oryza punctata
OPUNC03G22220
I
0.700
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.700
OGLUM03G24880
Oryza glumaepatula
OGLUM03G24880
I
0.700
mgf019173m
Mimulus guttatus
mgf019173m
I
0.699
mgf010934m
Mimulus guttatus
mgf010934m
I
0.699
GLYMA06G47000
Glycine max
GLYMA06G47000
I
0.694
GRMZM2G070523
Zea mays
GRMZM2G070523
I
0.693
AC217264.3_FG005
Zea mays
AC217264.3_FG005
I
0.693
Sb01g015920
Sorghum bicolor
Sb01g015920
I
0.693
F775_28392
Aegilops tauschii
F775_28392
I
0.691
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.691
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.691
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.691
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.691
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.691
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.691
MTR_1g021230
Medicago truncatula
MTR_1g021230
I
0.689
MDP0000308617
Malus domestica
MDP0000308617
I
0.688
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.688
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.688
LPERR06G17110
Leersia perrieri
LPERR06G17110
N
0.687
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.686
PRUPE_ppa019943mg
Prunus persica
PRUPE_ppa019943mg
I
0.685
MDP0000179306
Malus domestica
MDP0000179306
I
0.685
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.685
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.685
Gorai.013G159200
Gossypium raimondii
Gorai.013G159200
I
0.683
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.683
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.683
Si000907m.g
Setaria italica
Si000907m.g
I
0.682
MDP0000176798
Malus domestica
MDP0000176798
I
0.681
MDP0000151688
Malus domestica
MDP0000151688
I
0.681
Cla005406
Citrullus lanatus
Cla005406
I
0.681
LPERR03G20110
Leersia perrieri
LPERR03G20110
I
0.680
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.680
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.680
F775_08967
Aegilops tauschii
F775_08967
I
0.680
TRIUR3_15006
Triticum urartu
TRIUR3_15006
I
0.680
TCM_030853
Theobroma cacao
TCM_030853
I
0.679
Si007070m.g
Setaria italica
Si007070m.g
I
0.679
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.679
Sb10g023665
Sorghum bicolor
Sb10g023665
I
0.679
Gorai.002G089900
Gossypium raimondii
Gorai.002G089900
I
0.679
OPUNC06G18670
Oryza punctata
OPUNC06G18670
I
0.679
Pavir.Da00534
Panicum virgatum
Pavir.Da00534
I
0.679
Lus10021539.g
Linum usitatissimum
Lus10021539.g
I
0.678
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.678
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.678
Lus10040063.g
Linum usitatissimum
Lus10040063.g
I
0.678
Pm015094
Prunus mume
Pm015094
I
0.678
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.677
Pm016605
Prunus mume
Pm016605
I
0.677
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.677
TCM_041010
Theobroma cacao
TCM_041010
I
0.677
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.677
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.677
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.677
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.677
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.677
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.677
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.677
29823.m000215
Ricinus communis
29823.m000215
I
0.676
cassava11031.m1
Manihot esculenta
cassava11031.m1
I
0.676
ORGLA06G0168900
Oryza glaberrima
ORGLA06G0168900
I
0.675
ONIVA06G24230
Oryza nivara
ONIVA06G24230
I
0.675
OMERI06G21070
Oryza meridionalis
OMERI06G21070
I
0.675
ORUFI06G21880
Oryza rufipogon
ORUFI06G21880
I
0.675
OBART06G20450
Oryza barthii
OBART06G20450
I
0.675
Gorai.006G121900
Gossypium raimondii
Gorai.006G121900
I
0.675
OLONG_019401
Oryza longistaminata
OLONG_019401
I
0.675
OGLUM06G21530
Oryza glumaepatula
OGLUM06G21530
I
0.675
gw1.238.44.1
Physcomitrella patens
gw1.238.44.1
I
0.674
OBART01G34660
Oryza barthii
OBART01G34660
I
0.674
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.674
GLYMA04G15150
Glycine max
GLYMA04G15150
I
0.674
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.674
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.674
GLYMA15G35860
Glycine max
GLYMA15G35860
I
0.674
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.674
GAM1
Oryza indica
BGIOSGA004670
I
0.674
gw1.66.160.1
Physcomitrella patens
gw1.66.160.1
I
0.674
OB01G43550
Oryza brachyantha
OB01G43550
I
0.674
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.674
GAMYB
Oryza sativa
OS01G0812000
I
0.674
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.674
TCM_011907
Theobroma cacao
TCM_011907
I
0.674
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.674
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.672
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.672
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.672
Bo9g119060
Brassica oleracea
Bo9g119060
I
0.672
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.672
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.672
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.672
Bra002938
Brassica rapa
Bra002938
I
0.672
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.672
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.672
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.672
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.672
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.671
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.671
Eucgr.A01122
Eucalyptus grandis
Eucgr.A01122
I
0.670
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.669
Bra005597
Brassica rapa
Bra005597
I
0.669
MYB97
Arabidopsis thaliana
AT4G26930
I
0.669
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.669
Bostr.23794s0867
Boechera stricta
Bostr.23794s0867
I
0.669
MYB101
Arabidopsis lyrata
fgenesh2_kg.4__1233__AT2G32460.2
I
0.669
Bra021791
Brassica rapa
Bra021791
I
0.669
MYB97
Arabidopsis lyrata
fgenesh2_kg.7__1539__AT4G26930.1
I
0.669
Thhalv10016567m.g
Eutrema salsugineum
Thhalv10016567m.g
I
0.669
Cagra.0352s0034
Capsella grandiflora
Cagra.0352s0034
I
0.669
Bo4g046000
Brassica oleracea
Bo4g046000
I
0.669
MYB101
Arabidopsis thaliana
AT2G32460
D
0.669
Carubv10025227m.g
Capsella rubella
Carubv10025227m.g
I
0.669
MDP0000175835
Malus domestica
MDP0000175835
I
0.669
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.669
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.669
Bo3g026690
Brassica oleracea
Bo3g026690
I
0.669
AtMYB81
Arabidopsis lyrata
Al_scaffold_0004_975
I
0.668
AtMYB81
Arabidopsis thaliana
AT2G26960
D
0.668
Cagra.9104s0001
Capsella grandiflora
Cagra.9104s0001
I
0.668
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.668
mgf002965m
Mimulus guttatus
mgf002965m
I
0.668
Carubv10025403m.g
Capsella rubella
Carubv10025403m.g
I
0.668
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.668
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.667
Bo4g076940
Brassica oleracea
Bo4g076940
I
0.666
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.666
Bra012038
Brassica rapa
Bra012038
I
0.666
SapurV1A.0008s0050
Salix purpurea
SapurV1A.0008s0050
I
0.665
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.665
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.665
Sb03g037680
Sorghum bicolor
Sb03g037680
I
0.665
VIT_06s0009g02480
Vitis vinifera
VIT_06s0009g02480
I
0.665
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.665
orange1.1g039708m.g
Citrus sinensis
orange1.1g039708m.g
I
0.665
Ciclev10014958m.g
Citrus clementina
Ciclev10014958m.g
I
0.665
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.664
Pavir.Ab00447
Panicum virgatum
Pavir.Ab00447
I
0.664
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.663
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.663
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.663
Cla007782
Citrullus lanatus
Cla007782
I
0.662
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.662
mgf020500m
Mimulus guttatus
mgf020500m
I
0.662
gene23946-v1.0-hybrid
Fragaria vesca
gene23946-v1.0-hybrid
I
0.661
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.661
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.661