CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI06G21070
(
Oryza meridionalis
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OMERI06G21070
T276124_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.700
0.728
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.700
0.728
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.700
0.728
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.694
0.761
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.694
0.761
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.694
0.761
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.690
0.739
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.690
0.739
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.686
0.739
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI06G21070.1
Myb
169
216
KGPWTPDEDKRLREYVEAHGEGNWNRVQRNAGLNRCGKSCRLRWANHL
OMERI06G21070.1
Myb
222
266
KGPFSKEEEEMIIKLHLWLGNKWAKMANSLPGRTDNEIKNFWNTR
OMERI06G21070.2
Myb
80
127
KGPWTPDEDKRLREYVEAHGEGNWNRVQRNAGLNRCGKSCRLRWANHL
OMERI06G21070.2
Myb
133
177
KGPFSKEEEEMIIKLHLWLGNKWAKMANSLPGRTDNEIKNFWNTR
OMERI06G21070.3
Myb
169
216
KGPWTPDEDKRLREYVEAHGEGNWNRVQRNAGLNRCGKSCRLRWANHL
OMERI06G21070.3
Myb
222
266
KGPFSKEEEEMIIKLHLWLGNKWAKMANSLPGRTDNEIKNFWNTR
OMERI06G21070.4
Myb
80
127
KGPWTPDEDKRLREYVEAHGEGNWNRVQRNAGLNRCGKSCRLRWANHL
OMERI06G21070.4
Myb
133
177
KGPFSKEEEEMIIKLHLWLGNKWAKMANSLPGRTDNEIKNFWNTR
Links
Other
Myb/SANT
family TFs
Other
Oryza meridionalis
TFs
219 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA06G0168900
Oryza glaberrima
ORGLA06G0168900
I
0.909
ONIVA06G24230
Oryza nivara
ONIVA06G24230
I
0.909
OBART06G20450
Oryza barthii
OBART06G20450
I
0.909
ORUFI06G21880
Oryza rufipogon
ORUFI06G21880
I
0.909
OGLUM06G21530
Oryza glumaepatula
OGLUM06G21530
I
0.909
OLONG_019401
Oryza longistaminata
OLONG_019401
I
0.884
OPUNC06G18670
Oryza punctata
OPUNC06G18670
I
0.841
LPERR06G17110
Leersia perrieri
LPERR06G17110
N
0.790
TRIUR3_15006
Triticum urartu
TRIUR3_15006
I
0.787
Pavir.Da00534
Panicum virgatum
Pavir.Da00534
I
0.779
Si007070m.g
Setaria italica
Si007070m.g
I
0.779
Sb10g023665
Sorghum bicolor
Sb10g023665
I
0.779
F775_08967
Aegilops tauschii
F775_08967
I
0.776
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.721
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.721
Lus10040063.g
Linum usitatissimum
Lus10040063.g
I
0.714
Bra005597
Brassica rapa
Bra005597
I
0.714
Bo4g046000
Brassica oleracea
Bo4g046000
I
0.714
Lus10021539.g
Linum usitatissimum
Lus10021539.g
I
0.714
OS06G0605750
Oryza sativa
OS06G0605750
N
0.713
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.709
GLYMA12G31950
Glycine max
GLYMA12G31950
I
0.709
Ca_07119
Cicer arietinum
Ca_07119
I
0.709
MTR_2g088170
Medicago truncatula
MTR_2g088170
I
0.709
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.706
PRUPE_ppa019943mg
Prunus persica
PRUPE_ppa019943mg
I
0.706
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.706
Ca_20081
Cicer arietinum
Ca_20081
I
0.706
Eucgr.A01122
Eucalyptus grandis
Eucgr.A01122
I
0.704
GLYMA06G47000
Glycine max
GLYMA06G47000
I
0.702
MTR_3g052450
Medicago truncatula
MTR_3g052450
I
0.702
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.702
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.700
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.700
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.700
OBART01G34660
Oryza barthii
OBART01G34660
I
0.700
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.700
OB01G43550
Oryza brachyantha
OB01G43550
I
0.700
GAMYB
Oryza sativa
OS01G0812000
I
0.700
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.700
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.700
GAM1
Oryza indica
BGIOSGA004670
I
0.700
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.700
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.700
Pm015094
Prunus mume
Pm015094
I
0.700
TCM_041010
Theobroma cacao
TCM_041010
I
0.700
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.700
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.700
F775_28392
Aegilops tauschii
F775_28392
I
0.700
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.700
Si000907m.g
Setaria italica
Si000907m.g
I
0.700
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.697
mgf002965m
Mimulus guttatus
mgf002965m
I
0.697
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.697
Ca_25013
Cicer arietinum
Ca_25013
I
0.697
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.696
MDP0000179306
Malus domestica
MDP0000179306
I
0.696
MDP0000308617
Malus domestica
MDP0000308617
I
0.696
Cla005406
Citrullus lanatus
Cla005406
I
0.696
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.696
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.696
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.696
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.694
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.694
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.694
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
0.692
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.692
cassava11031.m1
Manihot esculenta
cassava11031.m1
I
0.692
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.692
29823.m000215
Ricinus communis
29823.m000215
I
0.692
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.692
Gorai.013G159200
Gossypium raimondii
Gorai.013G159200
I
0.691
29785.m000932
Ricinus communis
29785.m000932
I
0.691
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.691
29686.m000890
Ricinus communis
29686.m000890
I
0.691
Aquca_014_00928
Aquilegia coerulea
Aquca_014_00928
I
0.691
mgf010934m
Mimulus guttatus
mgf010934m
I
0.691
TCM_044611
Theobroma cacao
TCM_044611
I
0.691
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.691
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.691
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.691
Cucsa.364400
Cucumis sativus
Cucsa.364400
I
0.691
mgf019173m
Mimulus guttatus
mgf019173m
I
0.691
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.691
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.691
mgf025568m
Mimulus guttatus
mgf025568m
I
0.691
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.691
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.691
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.691
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.691
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.691
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.691
SapurV1A.0369s0230
Salix purpurea
SapurV1A.0369s0230
I
0.691
SapurV1A.0008s0050
Salix purpurea
SapurV1A.0008s0050
I
0.691
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.691
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.691
PDK_20s1831811g001
Phoenix dactylifera
PDK_20s1831811g001
I
0.691
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.691
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.691
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.691
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.691
Cla013880
Citrullus lanatus
Cla013880
I
0.691
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.691
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.691
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.691
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.691
MDP0000175835
Malus domestica
MDP0000175835
I
0.690
Bo3g026690
Brassica oleracea
Bo3g026690
I
0.690
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.690
Carubv10025227m.g
Capsella rubella
Carubv10025227m.g
I
0.690
Ciclev10014958m.g
Citrus clementina
Ciclev10014958m.g
I
0.690
MYB101
Arabidopsis thaliana
AT2G32460
D
0.690
gene23946-v1.0-hybrid
Fragaria vesca
gene23946-v1.0-hybrid
I
0.690
Gorai.006G121900
Gossypium raimondii
Gorai.006G121900
I
0.690
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.690
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.690
Bostr.23794s0867
Boechera stricta
Bostr.23794s0867
I
0.690
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.690
Cagra.0352s0034
Capsella grandiflora
Cagra.0352s0034
I
0.690
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.690
Bo9g119060
Brassica oleracea
Bo9g119060
I
0.690
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.690
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.690
Bra021791
Brassica rapa
Bra021791
I
0.690
Lus10035275.g
Linum usitatissimum
Lus10035275.g
I
0.690
TCM_011907
Theobroma cacao
TCM_011907
I
0.690
orange1.1g039708m.g
Citrus sinensis
orange1.1g039708m.g
I
0.690
MDP0000151688
Malus domestica
MDP0000151688
I
0.690
MYB101
Arabidopsis lyrata
fgenesh2_kg.4__1233__AT2G32460.2
I
0.690
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.690
Bra002938
Brassica rapa
Bra002938
I
0.690
MDP0000176798
Malus domestica
MDP0000176798
I
0.690
Lus10027189.g
Linum usitatissimum
Lus10027189.g
I
0.690
Thhalv10016567m.g
Eutrema salsugineum
Thhalv10016567m.g
I
0.690
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.689
Bo4g178040
Brassica oleracea
Bo4g178040
I
0.689
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.688
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.688
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.688
GLYMA15G35860
Glycine max
GLYMA15G35860
I
0.688
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.688
MDP0000147309
Malus domestica
MDP0000147309
I
0.688
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.688
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.688
Pm016605
Prunus mume
Pm016605
I
0.688
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.687
TCM_030853
Theobroma cacao
TCM_030853
I
0.687
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.687
Gorai.002G089900
Gossypium raimondii
Gorai.002G089900
I
0.687
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.686
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.686
VIT_06s0009g02480
Vitis vinifera
VIT_06s0009g02480
I
0.686
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.686
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.686
mgf020500m
Mimulus guttatus
mgf020500m
I
0.686
PK15478.1
Cannabis sativa
PK15478.1
I
0.684
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.684
LjSGA_026914.2
Lotus japonicus
LjSGA_026914.2
I
0.683
GLYMA04G15150
Glycine max
GLYMA04G15150
I
0.682
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.681
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.681
Cla007782
Citrullus lanatus
Cla007782
I
0.681
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.681
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.681
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.681
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.681
Thhalv10013329m.g
Eutrema salsugineum
Thhalv10013329m.g
I
0.680
Carubv10000715m.g
Capsella rubella
Carubv10000715m.g
I
0.680
Bostr.13129s0364
Boechera stricta
Bostr.13129s0364
I
0.680
MTR_3g011610
Medicago truncatula
MTR_3g011610
I
0.680
Cagra.2117s0052
Capsella grandiflora
Cagra.2117s0052
I
0.680
SapurV1A.0014s1240
Salix purpurea
SapurV1A.0014s1240
I
0.678
gw1.66.160.1
Physcomitrella patens
gw1.66.160.1
I
0.678
gw1.238.44.1
Physcomitrella patens
gw1.238.44.1
I
0.678
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.677
Bra035547
Brassica rapa
Bra035547
I
0.677
Gorai.007G312700
Gossypium raimondii
Gorai.007G312700
I
0.677
Sb10g027280
Sorghum bicolor
Sb10g027280
I
0.675
Si006555m.g
Setaria italica
Si006555m.g
I
0.675
Pavir.Db00593
Panicum virgatum
Pavir.Db00593
I
0.675
Bra022888
Brassica rapa
Bra022888
I
0.674
Sb03g037680
Sorghum bicolor
Sb03g037680
I
0.673
TRIUR3_17275
Triticum urartu
TRIUR3_17275
I
0.673
Traes_1BL_CF98E922B
Triticum aestivum
Traes_1BL_CF98E922B
I
0.673
Ca_21739
Cicer arietinum
Ca_21739
I
0.670
MYB101
Populus trichocarpa
POPTR_0002s21300
I
0.670
LjSGA_010688.1
Lotus japonicus
LjSGA_010688.1
I
0.667
Traes_2AL_41B71F83C
Triticum aestivum
Traes_2AL_41B71F83C
I
0.667
BRADI5G16707
Brachypodium distachyon
BRADI5G16707
I
0.667
ORGLA04G0169000
Oryza glaberrima
ORGLA04G0169000
I
0.667
ONIVA04G17990
Oryza nivara
ONIVA04G17990
I
0.667
MLOC_68698
Hordeum vulgare
MLOC_68698
I
0.667
ORUFI04G21320
Oryza rufipogon
ORUFI04G21320
I
0.667
Bra012038
Brassica rapa
Bra012038
I
0.667
Traes_2DL_5A0300CE0
Triticum aestivum
Traes_2DL_5A0300CE0
I
0.667
Traes_2BL_79F1B50DF
Triticum aestivum
Traes_2BL_79F1B50DF
I
0.667
Sb06g023620
Sorghum bicolor
Sb06g023620
I
0.667
BGIOSGA016822
Oryza indica
BGIOSGA016822
I
0.667
OB04G26860
Oryza brachyantha
OB04G26860
I
0.667
GSMUA_AchrUn_randomG15100_001
Musa acuminata
GSMUA_AchrUn_randomG15100_001
I
0.666
MTR_1g021230
Medicago truncatula
MTR_1g021230
I
0.666
LjSGA_057622.2
Lotus japonicus
LjSGA_057622.2
I
0.665
Bo4g076940
Brassica oleracea
Bo4g076940
I
0.664
OBART05G21120
Oryza barthii
OBART05G21120
I
0.664
Bo1g141040
Brassica oleracea
Bo1g141040
I
0.664
BGIOSGA017818
Oryza indica
BGIOSGA017818
I
0.664
OS05G0490600
Oryza sativa
OS05G0490600
I
0.664
ORUFI05G22370
Oryza rufipogon
ORUFI05G22370
I
0.664
Bra002042
Brassica rapa
Bra002042
I
0.664
OPUNC05G18800
Oryza punctata
OPUNC05G18800
I
0.664
Pm011812
Prunus mume
Pm011812
I
0.664
Pavir.Da00077
Panicum virgatum
Pavir.Da00077
I
0.664
OGLUM05G22330
Oryza glumaepatula
OGLUM05G22330
I
0.664
Thhalv10025350m.g
Eutrema salsugineum
Thhalv10025350m.g
I
0.663
MYB97
Arabidopsis thaliana
AT4G26930
I
0.661
MYB97
Arabidopsis lyrata
fgenesh2_kg.7__1539__AT4G26930.1
I
0.661
Bo3g021790
Brassica oleracea
Bo3g021790
I
0.661
Bra028997
Brassica rapa
Bra028997
I
0.661