CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA04G15150
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA04G15150
T271314_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.782
0.849
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.770
0.839
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.770
0.839
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.770
0.839
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.765
0.796
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.764
0.839
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.764
0.839
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.739
0.785
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.739
0.785
MYB33
M02306_2.00
Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD
PBM
Weirauch et al.(2014)
pTH8204
0.725
0.796
MYB33
M07120_2.00
Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB33_col_a
0.725
0.796
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.707
0.774
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.707
0.774
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.707
0.774
AtMYB81
M07049_2.00
Arabidopsis thaliana
VTAACNGHWWH
DWWDCNGTTAB
Dap-seq
OMalley et al.(2016)
MYB81_col_a
0.678
0.763
AtMYB81
M07050_2.00
Arabidopsis thaliana
DHHNYAACBGHWWH
DWWDCVGTTRNDDH
Dap-seq
OMalley et al.(2016)
MYB81_colamp_a
0.678
0.763
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA04G15150.2
Myb
35
82
KGPWTAAEDVLLVNYVQKHGEGNWNAVQKYSGLSRCGKSCRLRWANHL
GLYMA04G15150.2
Myb
88
133
KGAFTAEEERMIAELHAKMGNKWARMAAHLHGRTDNEIKNYWNTRM
GLYMA04G15150.3
Myb
35
82
KGPWTAAEDVLLVNYVQKHGEGNWNAVQKYSGLSRCGKSCRLRWANHL
GLYMA04G15150.3
Myb
88
133
KGAFTAEEERMIAELHAKMGNKWARMAAHLHGRTDNEIKNYWNTRM
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
235 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA06G47000
Glycine max
GLYMA06G47000
I
0.876
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.792
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.786
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.785
GLYMA15G35860
Glycine max
GLYMA15G35860
I
0.785
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.783
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.783
29785.m000932
Ricinus communis
29785.m000932
I
0.783
gene23946-v1.0-hybrid
Fragaria vesca
gene23946-v1.0-hybrid
I
0.782
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.782
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.782
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.782
GAMYB
Oryza sativa
OS01G0812000
I
0.782
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.782
OBART01G34660
Oryza barthii
OBART01G34660
I
0.782
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.782
OB01G43550
Oryza brachyantha
OB01G43550
I
0.782
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.782
GAM1
Oryza indica
BGIOSGA004670
I
0.782
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.780
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.780
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.779
mgf025568m
Mimulus guttatus
mgf025568m
I
0.777
Aquca_014_00928
Aquilegia coerulea
Aquca_014_00928
I
0.777
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.776
Cucsa.364400
Cucumis sativus
Cucsa.364400
I
0.776
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.772
Ca_25013
Cicer arietinum
Ca_25013
I
0.771
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.770
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.770
Cla005406
Citrullus lanatus
Cla005406
I
0.770
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.770
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.770
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.769
TCM_011907
Theobroma cacao
TCM_011907
I
0.769
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.767
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.766
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.766
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.766
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.766
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.765
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.764
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.764
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.764
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.764
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.764
F775_28392
Aegilops tauschii
F775_28392
I
0.764
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.764
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.764
29686.m000890
Ricinus communis
29686.m000890
I
0.763
cassava11031.m1
Manihot esculenta
cassava11031.m1
I
0.763
29823.m000215
Ricinus communis
29823.m000215
I
0.763
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.763
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.763
MTR_1g021230
Medicago truncatula
MTR_1g021230
I
0.761
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.761
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.761
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.760
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.760
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.760
Pm016605
Prunus mume
Pm016605
I
0.760
orange1.1g039708m.g
Citrus sinensis
orange1.1g039708m.g
I
0.760
Ciclev10014958m.g
Citrus clementina
Ciclev10014958m.g
I
0.760
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.760
Ca_21739
Cicer arietinum
Ca_21739
I
0.759
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.758
gw1.66.160.1
Physcomitrella patens
gw1.66.160.1
I
0.757
TCM_044611
Theobroma cacao
TCM_044611
I
0.757
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.757
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.757
gw1.238.44.1
Physcomitrella patens
gw1.238.44.1
I
0.757
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.757
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.757
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.757
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.756
Thhalv10016567m.g
Eutrema salsugineum
Thhalv10016567m.g
I
0.756
Ca_07119
Cicer arietinum
Ca_07119
I
0.756
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.756
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.756
Cagra.0352s0034
Capsella grandiflora
Cagra.0352s0034
I
0.756
MDP0000175835
Malus domestica
MDP0000175835
I
0.756
GLYMA12G31950
Glycine max
GLYMA12G31950
I
0.756
Carubv10025227m.g
Capsella rubella
Carubv10025227m.g
I
0.756
Si000907m.g
Setaria italica
Si000907m.g
I
0.755
Pm015094
Prunus mume
Pm015094
I
0.755
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.755
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.754
MDP0000308617
Malus domestica
MDP0000308617
I
0.754
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.753
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.752
MDP0000176798
Malus domestica
MDP0000176798
I
0.751
Lus10021539.g
Linum usitatissimum
Lus10021539.g
I
0.751
MDP0000179306
Malus domestica
MDP0000179306
I
0.751
PRUPE_ppa019943mg
Prunus persica
PRUPE_ppa019943mg
I
0.751
MDP0000151688
Malus domestica
MDP0000151688
I
0.751
mgf002965m
Mimulus guttatus
mgf002965m
I
0.751
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.751
Lus10040063.g
Linum usitatissimum
Lus10040063.g
I
0.751
TCM_041010
Theobroma cacao
TCM_041010
I
0.750
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.750
Cla013880
Citrullus lanatus
Cla013880
I
0.750
Gorai.006G121900
Gossypium raimondii
Gorai.006G121900
I
0.749
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.748
Thhalv10013329m.g
Eutrema salsugineum
Thhalv10013329m.g
I
0.748
Cla007782
Citrullus lanatus
Cla007782
I
0.747
GSMUA_AchrUn_randomG15100_001
Musa acuminata
GSMUA_AchrUn_randomG15100_001
I
0.747
Lus10027189.g
Linum usitatissimum
Lus10027189.g
I
0.746
Lus10035275.g
Linum usitatissimum
Lus10035275.g
I
0.746
mgf010934m
Mimulus guttatus
mgf010934m
I
0.745
Cagra.2117s0052
Capsella grandiflora
Cagra.2117s0052
I
0.745
Carubv10000715m.g
Capsella rubella
Carubv10000715m.g
I
0.745
mgf019173m
Mimulus guttatus
mgf019173m
I
0.745
Bostr.13129s0364
Boechera stricta
Bostr.13129s0364
I
0.745
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.742
GLYMA13G04031
Glycine max
GLYMA13G04031
I
0.741
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.741
Bra021791
Brassica rapa
Bra021791
I
0.739
MYB101
Arabidopsis lyrata
fgenesh2_kg.4__1233__AT2G32460.2
I
0.739
MDP0000147309
Malus domestica
MDP0000147309
I
0.739
Bostr.23794s0867
Boechera stricta
Bostr.23794s0867
I
0.739
MYB101
Arabidopsis thaliana
AT2G32460
D
0.739
Bo3g026690
Brassica oleracea
Bo3g026690
I
0.739
Sb03g037680
Sorghum bicolor
Sb03g037680
I
0.738
MTR_2g088170
Medicago truncatula
MTR_2g088170
I
0.737
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.736
TCM_030853
Theobroma cacao
TCM_030853
I
0.735
Gorai.002G089900
Gossypium raimondii
Gorai.002G089900
I
0.735
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.734
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.734
MTR_3g011610
Medicago truncatula
MTR_3g011610
I
0.733
Bo4g046000
Brassica oleracea
Bo4g046000
I
0.733
Bra005597
Brassica rapa
Bra005597
I
0.733
PDK_20s1831811g001
Phoenix dactylifera
PDK_20s1831811g001
I
0.730
SELMODRAFT_38120
Selaginella moellendorffii
SELMODRAFT_38120
I
0.729
mgf020500m
Mimulus guttatus
mgf020500m
I
0.728
SapurV1A.0369s0230
Salix purpurea
SapurV1A.0369s0230
I
0.727
MYB33
Arabidopsis thaliana
AT5G06100
D
0.725
Bra034842
Brassica rapa
Bra034842
I
0.725
Bo5g136570
Brassica oleracea
Bo5g136570
I
0.725
Bra022888
Brassica rapa
Bra022888
I
0.723
SapurV1A.0014s1240
Salix purpurea
SapurV1A.0014s1240
I
0.723
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.722
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.722
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.721
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.720
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.720
VIT_06s0009g02480
Vitis vinifera
VIT_06s0009g02480
I
0.719
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.718
Bo4g178040
Brassica oleracea
Bo4g178040
I
0.718
GLYMA20G11040
Glycine max
GLYMA20G11040
I
0.718
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.718
LjSGA_010688.1
Lotus japonicus
LjSGA_010688.1
I
0.718
Pm011812
Prunus mume
Pm011812
I
0.716
Bra012038
Brassica rapa
Bra012038
I
0.716
Bo4g076940
Brassica oleracea
Bo4g076940
I
0.716
MYB101
Populus trichocarpa
POPTR_0002s21300
I
0.714
Thhalv10020455m.g
Eutrema salsugineum
Thhalv10020455m.g
I
0.713
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.713
MTR_3g052450
Medicago truncatula
MTR_3g052450
I
0.713
PK15478.1
Cannabis sativa
PK15478.1
I
0.711
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.710
PK17293.1
Cannabis sativa
PK17293.1
I
0.710
Ca_20081
Cicer arietinum
Ca_20081
I
0.709
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.709
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.709
ATMYB65
Arabidopsis lyrata
fgenesh2_kg.3__1182__AT3G11440.1
I
0.707
ATMYB65
Arabidopsis thaliana
AT3G11440
D
0.707
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.707
Carubv10013393m.g
Capsella rubella
Carubv10013393m.g
I
0.707
Bostr.19424s1075
Boechera stricta
Bostr.19424s1075
I
0.707
Cagra.1655s0026
Capsella grandiflora
Cagra.1655s0026
I
0.707
Gorai.007G312700
Gossypium raimondii
Gorai.007G312700
I
0.707
Gorai.013G159200
Gossypium raimondii
Gorai.013G159200
I
0.705
SapurV1A.0008s0050
Salix purpurea
SapurV1A.0008s0050
I
0.703
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
0.702
BGIOSGA017818
Oryza indica
BGIOSGA017818
I
0.700
OBART05G21120
Oryza barthii
OBART05G21120
I
0.700
ORUFI05G22370
Oryza rufipogon
ORUFI05G22370
I
0.700
OGLUM05G22330
Oryza glumaepatula
OGLUM05G22330
I
0.700
Ca_15422
Cicer arietinum
Ca_15422
I
0.700
OS05G0490600
Oryza sativa
OS05G0490600
I
0.700
MLOC_6041
Hordeum vulgare
MLOC_6041
I
0.699
OPUNC05G18800
Oryza punctata
OPUNC05G18800
I
0.696
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.694
Bo9g119060
Brassica oleracea
Bo9g119060
I
0.694
Bra002938
Brassica rapa
Bra002938
I
0.694
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.694
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.694
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.694
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.694
Eucgr.A01122
Eucalyptus grandis
Eucgr.A01122
I
0.692
Thhalv10025350m.g
Eutrema salsugineum
Thhalv10025350m.g
I
0.690
GSMUA_Achr10G29280_001
Musa acuminata
GSMUA_Achr10G29280_001
I
0.690
AtMYB81
Arabidopsis lyrata
Al_scaffold_0004_975
I
0.686
Thhalv10002011m.g
Eutrema salsugineum
Thhalv10002011m.g
I
0.686
OMERI06G24960
Oryza meridionalis
OMERI06G24960
I
0.685
BGIOSGA020673
Oryza indica
BGIOSGA020673
I
0.685
OGLUM06G26120
Oryza glumaepatula
OGLUM06G26120
I
0.685
ONIVA06G28020
Oryza nivara
ONIVA06G28020
I
0.685
ORUFI06G26670
Oryza rufipogon
ORUFI06G26670
I
0.685
OS06G0679400
Oryza sativa
OS06G0679400
I
0.685
ORGLA06G0168900
Oryza glaberrima
ORGLA06G0168900
I
0.682
Carubv10025403m.g
Capsella rubella
Carubv10025403m.g
I
0.682
Cagra.9104s0001
Capsella grandiflora
Cagra.9104s0001
I
0.682
OBART06G20450
Oryza barthii
OBART06G20450
I
0.682
OGLUM06G21530
Oryza glumaepatula
OGLUM06G21530
I
0.682
ORUFI06G21880
Oryza rufipogon
ORUFI06G21880
I
0.682
Bostr.6864s0293
Boechera stricta
Bostr.6864s0293
I
0.682
OMERI06G21070
Oryza meridionalis
OMERI06G21070
I
0.682
ONIVA06G24230
Oryza nivara
ONIVA06G24230
I
0.682
GRMZM2G028054
Zea mays
GRMZM2G028054
I
0.681
PGSC0003DMG400027418
Solanum tuberosum
PGSC0003DMG400027418
I
0.680
ONIVA05G21800
Oryza nivara
ONIVA05G21800
I
0.680
AtMYB81
Arabidopsis thaliana
AT2G26960
D
0.678
F775_23034
Aegilops tauschii
F775_23034
I
0.678
TRIUR3_20797
Triticum urartu
TRIUR3_20797
I
0.678
Traes_1BL_CF98E922B
Triticum aestivum
Traes_1BL_CF98E922B
I
0.676
TRIUR3_17275
Triticum urartu
TRIUR3_17275
I
0.676
LPERR06G20610
Leersia perrieri
LPERR06G20610
I
0.675
Bra028997
Brassica rapa
Bra028997
I
0.674
Pavir.Db00593
Panicum virgatum
Pavir.Db00593
I
0.674
Si006555m.g
Setaria italica
Si006555m.g
I
0.674
Bo3g021790
Brassica oleracea
Bo3g021790
I
0.674
Bra035547
Brassica rapa
Bra035547
I
0.672
F775_08967
Aegilops tauschii
F775_08967
I
0.668
LjSGA_057622.2
Lotus japonicus
LjSGA_057622.2
I
0.668
Bra000531
Brassica rapa
Bra000531
I
0.667
Bo3g041750
Brassica oleracea
Bo3g041750
I
0.667
OPUNC06G22490
Oryza punctata
OPUNC06G22490
I
0.665
Pavir.Da00534
Panicum virgatum
Pavir.Da00534
I
0.665
Sb10g023665
Sorghum bicolor
Sb10g023665
I
0.665
Si007070m.g
Setaria italica
Si007070m.g
I
0.665
Sb10g027280
Sorghum bicolor
Sb10g027280
I
0.665
Pavir.Da00077
Panicum virgatum
Pavir.Da00077
I
0.663