CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA13G04031
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA13G04031
T271581_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.782
0.870
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.765
0.859
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.765
0.859
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.765
0.837
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.761
0.870
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.761
0.870
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.761
0.870
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.737
0.815
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.737
0.815
MYB33
M02306_2.00
Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD
PBM
Weirauch et al.(2014)
pTH8204
0.735
0.815
MYB33
M07120_2.00
Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB33_col_a
0.735
0.815
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.723
0.815
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.723
0.815
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.723
0.815
AtMYB81
M07049_2.00
Arabidopsis thaliana
VTAACNGHWWH
DWWDCNGTTAB
Dap-seq
OMalley et al.(2016)
MYB81_col_a
0.701
0.783
AtMYB81
M07050_2.00
Arabidopsis thaliana
DHHNYAACBGHWWH
DWWDCVGTTRNDDH
Dap-seq
OMalley et al.(2016)
MYB81_colamp_a
0.701
0.783
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA13G04031.1
Myb
40
87
KGPWTAAEDAILVEYVKKHGQGNWNAVQKHSGLARCGKSCRLRWANHL
GLYMA13G04031.1
Myb
93
137
KGAFTAEEENRILELHAKMGNKWARMAAELPGRTDNEIKNYWNTR
GLYMA13G04031.2
Myb
40
87
KGPWTAAEDAILVEYVKKHGQGNWNAVQKHSGLARCGKSCRLRWANHL
GLYMA13G04031.2
Myb
93
137
KGAFTAEEENRILELHAKMGNKWARMAAELPGRTDNEIKNYWNTR
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
223 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA20G11040
Glycine max
GLYMA20G11040
I
0.869
mgf025568m
Mimulus guttatus
mgf025568m
I
0.835
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.830
29785.m000932
Ricinus communis
29785.m000932
I
0.830
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.797
Aquca_014_00928
Aquilegia coerulea
Aquca_014_00928
I
0.796
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.796
Gorai.006G121900
Gossypium raimondii
Gorai.006G121900
I
0.795
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.794
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.794
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.793
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.793
MTR_1g021230
Medicago truncatula
MTR_1g021230
I
0.792
TCM_041010
Theobroma cacao
TCM_041010
I
0.788
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.788
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.787
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.785
mgf002965m
Mimulus guttatus
mgf002965m
I
0.785
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.783
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.783
GLYMA15G35860
Glycine max
GLYMA15G35860
I
0.782
GAMYB
Oryza sativa
OS01G0812000
I
0.782
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.782
OBART01G34660
Oryza barthii
OBART01G34660
I
0.782
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.782
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.782
GAM1
Oryza indica
BGIOSGA004670
I
0.782
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.782
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.782
OB01G43550
Oryza brachyantha
OB01G43550
I
0.782
Cucsa.364400
Cucumis sativus
Cucsa.364400
I
0.780
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.780
Pm016605
Prunus mume
Pm016605
I
0.779
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.779
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.779
PRUPE_ppa019943mg
Prunus persica
PRUPE_ppa019943mg
I
0.779
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.778
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.776
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.776
TCM_044611
Theobroma cacao
TCM_044611
I
0.776
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.776
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.776
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.776
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.776
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.776
29686.m000890
Ricinus communis
29686.m000890
I
0.776
Cla005406
Citrullus lanatus
Cla005406
I
0.773
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.773
SapurV1A.0008s0050
Salix purpurea
SapurV1A.0008s0050
I
0.773
Ca_25013
Cicer arietinum
Ca_25013
I
0.772
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.771
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.771
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.771
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.771
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.770
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.770
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.769
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.769
gene23946-v1.0-hybrid
Fragaria vesca
gene23946-v1.0-hybrid
I
0.768
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.767
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.767
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.765
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.765
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.765
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.765
Si000907m.g
Setaria italica
Si000907m.g
I
0.765
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.765
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.765
F775_28392
Aegilops tauschii
F775_28392
I
0.765
GLYMA06G47000
Glycine max
GLYMA06G47000
I
0.765
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.765
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.764
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.761
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.761
Pm015094
Prunus mume
Pm015094
I
0.761
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.761
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.761
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.760
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.760
MDP0000175835
Malus domestica
MDP0000175835
I
0.760
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.759
PDK_20s1831811g001
Phoenix dactylifera
PDK_20s1831811g001
I
0.758
TCM_011907
Theobroma cacao
TCM_011907
I
0.758
Ciclev10014958m.g
Citrus clementina
Ciclev10014958m.g
I
0.758
orange1.1g039708m.g
Citrus sinensis
orange1.1g039708m.g
I
0.758
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.758
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.757
gw1.66.160.1
Physcomitrella patens
gw1.66.160.1
I
0.757
gw1.238.44.1
Physcomitrella patens
gw1.238.44.1
I
0.757
Thhalv10013329m.g
Eutrema salsugineum
Thhalv10013329m.g
I
0.757
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.755
GLYMA12G31950
Glycine max
GLYMA12G31950
I
0.755
Ca_21739
Cicer arietinum
Ca_21739
I
0.755
Thhalv10016567m.g
Eutrema salsugineum
Thhalv10016567m.g
I
0.754
Cla013880
Citrullus lanatus
Cla013880
I
0.754
Cagra.0352s0034
Capsella grandiflora
Cagra.0352s0034
I
0.754
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.754
Carubv10025227m.g
Capsella rubella
Carubv10025227m.g
I
0.754
Carubv10000715m.g
Capsella rubella
Carubv10000715m.g
I
0.754
Cagra.2117s0052
Capsella grandiflora
Cagra.2117s0052
I
0.754
Bostr.13129s0364
Boechera stricta
Bostr.13129s0364
I
0.754
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.753
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.753
29823.m000215
Ricinus communis
29823.m000215
I
0.752
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.751
VIT_06s0009g02480
Vitis vinifera
VIT_06s0009g02480
I
0.750
GSMUA_AchrUn_randomG15100_001
Musa acuminata
GSMUA_AchrUn_randomG15100_001
I
0.750
Traes_1BL_CF98E922B
Triticum aestivum
Traes_1BL_CF98E922B
I
0.748
TRIUR3_17275
Triticum urartu
TRIUR3_17275
I
0.748
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.747
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.747
MDP0000151688
Malus domestica
MDP0000151688
I
0.746
MDP0000176798
Malus domestica
MDP0000176798
I
0.746
SapurV1A.0369s0230
Salix purpurea
SapurV1A.0369s0230
I
0.746
Ca_07119
Cicer arietinum
Ca_07119
I
0.746
MDP0000179306
Malus domestica
MDP0000179306
I
0.744
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.744
MTR_3g011610
Medicago truncatula
MTR_3g011610
I
0.743
Cla007782
Citrullus lanatus
Cla007782
I
0.742
GLYMA04G15150
Glycine max
GLYMA04G15150
I
0.741
mgf010934m
Mimulus guttatus
mgf010934m
I
0.740
mgf019173m
Mimulus guttatus
mgf019173m
I
0.740
MDP0000147309
Malus domestica
MDP0000147309
I
0.740
Sb03g037680
Sorghum bicolor
Sb03g037680
I
0.739
Bostr.23794s0867
Boechera stricta
Bostr.23794s0867
I
0.737
MYB101
Arabidopsis thaliana
AT2G32460
D
0.737
MYB101
Arabidopsis lyrata
fgenesh2_kg.4__1233__AT2G32460.2
I
0.737
Bra021791
Brassica rapa
Bra021791
I
0.737
Bo4g178040
Brassica oleracea
Bo4g178040
I
0.737
Bo3g026690
Brassica oleracea
Bo3g026690
I
0.737
Lus10040063.g
Linum usitatissimum
Lus10040063.g
I
0.736
Lus10027189.g
Linum usitatissimum
Lus10027189.g
I
0.735
Lus10035275.g
Linum usitatissimum
Lus10035275.g
I
0.735
MYB33
Arabidopsis thaliana
AT5G06100
D
0.735
Ca_15422
Cicer arietinum
Ca_15422
I
0.733
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.732
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.732
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
0.730
cassava11031.m1
Manihot esculenta
cassava11031.m1
I
0.728
Ca_20081
Cicer arietinum
Ca_20081
I
0.728
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.728
Lus10021539.g
Linum usitatissimum
Lus10021539.g
I
0.727
MTR_2g088170
Medicago truncatula
MTR_2g088170
I
0.726
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.725
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.725
Cagra.1655s0026
Capsella grandiflora
Cagra.1655s0026
I
0.723
ATMYB65
Arabidopsis thaliana
AT3G11440
D
0.723
Carubv10013393m.g
Capsella rubella
Carubv10013393m.g
I
0.723
ATMYB65
Arabidopsis lyrata
fgenesh2_kg.3__1182__AT3G11440.1
I
0.723
MTR_3g052450
Medicago truncatula
MTR_3g052450
I
0.723
MDP0000308617
Malus domestica
MDP0000308617
I
0.723
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.723
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.723
Bostr.19424s1075
Boechera stricta
Bostr.19424s1075
I
0.723
Bra022888
Brassica rapa
Bra022888
I
0.722
SapurV1A.0014s1240
Salix purpurea
SapurV1A.0014s1240
I
0.721
AtMYB81
Arabidopsis lyrata
Al_scaffold_0004_975
I
0.719
Thhalv10002011m.g
Eutrema salsugineum
Thhalv10002011m.g
I
0.719
Thhalv10020455m.g
Eutrema salsugineum
Thhalv10020455m.g
I
0.717
Gorai.002G089900
Gossypium raimondii
Gorai.002G089900
I
0.716
GRMZM2G028054
Zea mays
GRMZM2G028054
I
0.716
TCM_030853
Theobroma cacao
TCM_030853
I
0.716
Bra034842
Brassica rapa
Bra034842
I
0.714
Bo5g136570
Brassica oleracea
Bo5g136570
I
0.714
PK15478.1
Cannabis sativa
PK15478.1
I
0.714
Cagra.9104s0001
Capsella grandiflora
Cagra.9104s0001
I
0.714
Carubv10025403m.g
Capsella rubella
Carubv10025403m.g
I
0.714
Bostr.6864s0293
Boechera stricta
Bostr.6864s0293
I
0.714
MYB101
Populus trichocarpa
POPTR_0002s21300
I
0.713
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.710
OBART05G21120
Oryza barthii
OBART05G21120
I
0.709
ORUFI05G22370
Oryza rufipogon
ORUFI05G22370
I
0.709
OS05G0490600
Oryza sativa
OS05G0490600
I
0.709
BGIOSGA017818
Oryza indica
BGIOSGA017818
I
0.709
OGLUM05G22330
Oryza glumaepatula
OGLUM05G22330
I
0.709
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.708
Bo4g046000
Brassica oleracea
Bo4g046000
I
0.707
Bra005597
Brassica rapa
Bra005597
I
0.707
OPUNC05G18800
Oryza punctata
OPUNC05G18800
I
0.705
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.705
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.704
PGSC0003DMG400027418
Solanum tuberosum
PGSC0003DMG400027418
I
0.703
SELMODRAFT_38120
Selaginella moellendorffii
SELMODRAFT_38120
I
0.703
AtMYB81
Arabidopsis thaliana
AT2G26960
D
0.701
Bo3g041750
Brassica oleracea
Bo3g041750
I
0.699
Bra000531
Brassica rapa
Bra000531
I
0.699
mgf020500m
Mimulus guttatus
mgf020500m
I
0.697
Bo4g076940
Brassica oleracea
Bo4g076940
I
0.694
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.690
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.690
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.690
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.690
Bra002938
Brassica rapa
Bra002938
I
0.690
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.690
ONIVA05G21800
Oryza nivara
ONIVA05G21800
I
0.689
Gorai.007G312700
Gossypium raimondii
Gorai.007G312700
I
0.688
Pm011812
Prunus mume
Pm011812
I
0.686
Gorai.013G159200
Gossypium raimondii
Gorai.013G159200
I
0.686
LjSGA_010688.1
Lotus japonicus
LjSGA_010688.1
I
0.686
Bo9g119060
Brassica oleracea
Bo9g119060
I
0.685
PK17293.1
Cannabis sativa
PK17293.1
I
0.680
Bra028997
Brassica rapa
Bra028997
I
0.679
Bo3g021790
Brassica oleracea
Bo3g021790
I
0.679
Ca_06236
Cicer arietinum
Ca_06236
I
0.677
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.677
Ca_12826
Cicer arietinum
Ca_12826
I
0.671
PDK_20s1383724g001
Phoenix dactylifera
PDK_20s1383724g001
I
0.670
GRMZM2G166337
Zea mays
GRMZM2G166337
I
0.668
GRMZM2G031323
Zea mays
GRMZM2G031323
I
0.668
OPUNC06G18670
Oryza punctata
OPUNC06G18670
I
0.668
Si030273m.g
Setaria italica
Si030273m.g
I
0.668
Pavir.Ba00668
Panicum virgatum
Pavir.Ba00668
I
0.668
Eucgr.A01122
Eucalyptus grandis
Eucgr.A01122
I
0.666
Pavir.J38204
Panicum virgatum
Pavir.J38204
I
0.665
Sb02g036250
Sorghum bicolor
Sb02g036250
I
0.665
Bo1g141040
Brassica oleracea
Bo1g141040
I
0.663
LjSGA_057622.2
Lotus japonicus
LjSGA_057622.2
I
0.663
Bra002042
Brassica rapa
Bra002042
I
0.663
MLOC_62436
Hordeum vulgare
MLOC_62436
I
0.662
BRADI1G24887
Brachypodium distachyon
BRADI1G24887
I
0.662
Thhalv10025350m.g
Eutrema salsugineum
Thhalv10025350m.g
I
0.661
Bra012038
Brassica rapa
Bra012038
I
0.661