CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_6041
(
Hordeum vulgare
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MLOC_6041
T274534_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Gam1
M02703_2.00
Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN
SELEX
Mathelier et al.(2014)
MA0034.1
0.740
0.804
Gam1
M11061_2.00
Hordeum vulgare
YAACSRHM
KDYSGTTR
Transfac
Matys et al.(2006)
P$GAMYB_01
0.740
0.804
GAM1_ORYSI
M11055_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$GAMYB_Q2
0.723
0.793
Q9FR42_TOBAC
M11076_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MYBAS1_01
0.688
0.761
myb.Ph3
M02704_2.00
Petunia x hybrida
WAACNGTYW
WRACNGTTW
SELEX
Mathelier et al.(2014)
MA0054.1
0.683
0.772
myb.Ph3
M11070_2.00
Petunia x hybrida
RTAACSGTTTYHW
WDRAAACSGTTAY
Transfac
Matys et al.(2006)
P$MYBPH3_01
0.683
0.772
myb.Ph3
M11071_2.00
Petunia x hybrida
STAACTAACTHHH
DDDAGTTAGTTAS
Transfac
Matys et al.(2006)
P$MYBPH3_02
0.683
0.772
MYB33
M02306_2.00
Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD
PBM
Weirauch et al.(2014)
pTH8204
0.683
0.750
MYB33
M07120_2.00
Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB33_col_a
0.683
0.750
MYB101
M07051_2.00
Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN
Dap-seq
OMalley et al.(2016)
MYB101_col_a
0.679
0.783
MYB101
M07052_2.00
Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH
Dap-seq
OMalley et al.(2016)
MYB101_colamp_a
0.679
0.783
ATMYB65
M01076_2.00
Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD
PBM
Sullivan et al.(2014)
pTH7084
0.670
0.739
ATMYB65
M07076_2.00
Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH
Dap-seq
OMalley et al.(2016)
MYB65_col200_a
0.670
0.739
ATMYB65
M07077_2.00
Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN
Dap-seq
OMalley et al.(2016)
MYB65_colamp_a
0.670
0.739
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_6041.1
Myb
42
89
KGPWTAAEDALLVNHVRQHGEGNWNAVQRITGLLRCGKSCRLRWTNHL
MLOC_6041.1
Myb
95
139
KGAFSPDEELLIAQLHAQLGNKWARMATHLPGRTDNEIKNYWNTR
Links
Other
Myb/SANT
family TFs
Other
Hordeum vulgare
TFs
238 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TRIUR3_20797
Triticum urartu
TRIUR3_20797
I
0.888
F775_23034
Aegilops tauschii
F775_23034
I
0.888
OPUNC03G22220
Oryza punctata
OPUNC03G22220
I
0.848
ONIVA04G15310
Oryza nivara
ONIVA04G15310
I
0.839
OMERI03G21920
Oryza meridionalis
OMERI03G21920
I
0.839
OLONG_025057
Oryza longistaminata
OLONG_025057
I
0.839
OBART03G24120
Oryza barthii
OBART03G24120
I
0.839
ORUFI03G24730
Oryza rufipogon
ORUFI03G24730
I
0.839
OS03G0578900
Oryza sativa
OS03G0578900
I
0.839
OB03G32840
Oryza brachyantha
OB03G32840
I
0.839
OGLUM03G24880
Oryza glumaepatula
OGLUM03G24880
I
0.839
ORGLA03G0224700
Oryza glaberrima
ORGLA03G0224700
I
0.839
Sb01g015920
Sorghum bicolor
Sb01g015920
I
0.823
GRMZM2G070523
Zea mays
GRMZM2G070523
I
0.823
AC217264.3_FG005
Zea mays
AC217264.3_FG005
I
0.823
LPERR03G20110
Leersia perrieri
LPERR03G20110
I
0.819
Si039629m.g
Setaria italica
Si039629m.g
I
0.809
Pavir.Ib03827
Panicum virgatum
Pavir.Ib03827
I
0.800
Traes_7DS_8DF2537B8
Triticum aestivum
Traes_7DS_8DF2537B8
I
0.787
evm.TU.supercontig_12.292
Carica papaya
evm.TU.supercontig_12.292
I
0.768
GSMUA_Achr4G23690_001
Musa acuminata
GSMUA_Achr4G23690_001
I
0.765
PK15478.1
Cannabis sativa
PK15478.1
I
0.764
LjT02G13.10.nc
Lotus japonicus
LjT02G13.10.nc
I
0.762
Ciclev10010620m.g
Citrus clementina
Ciclev10010620m.g
I
0.753
orange1.1g046419m.g
Citrus sinensis
orange1.1g046419m.g
I
0.753
cassava40302.m1
Manihot esculenta
cassava40302.m1
I
0.748
Ca_20081
Cicer arietinum
Ca_20081
I
0.745
GLYMA08G42955
Glycine max
GLYMA08G42955
I
0.744
GLYMA08G42920
Glycine max
GLYMA08G42920
I
0.742
F775_28392
Aegilops tauschii
F775_28392
I
0.740
GRMZM2G139688
Zea mays
GRMZM2G139688
I
0.740
Gam1
Hordeum vulgare
Q96464_HORVU
D
0.740
TRAES3BF027700010CFD_g
Triticum aestivum
TRAES3BF027700010CFD_g
I
0.740
TRIUR3_27104
Triticum urartu
TRIUR3_27104
I
0.740
Pavir.Ea03206
Panicum virgatum
Pavir.Ea03206
I
0.740
BRADI2G53010
Brachypodium distachyon
BRADI2G53010
I
0.740
GSMUA_Achr1G17150_001
Musa acuminata
GSMUA_Achr1G17150_001
I
0.737
GLYMA18G10921
Glycine max
GLYMA18G10921
I
0.737
gene00431-v1.0-hybrid
Fragaria vesca
gene00431-v1.0-hybrid
I
0.735
Pm016605
Prunus mume
Pm016605
I
0.735
PRUPE_ppa003628mg
Prunus persica
PRUPE_ppa003628mg
I
0.735
Cla005406
Citrullus lanatus
Cla005406
I
0.734
Lus10026142.g
Linum usitatissimum
Lus10026142.g
I
0.732
Lus10008685.g
Linum usitatissimum
Lus10008685.g
I
0.732
MTR_3g052430
Medicago truncatula
MTR_3g052430
I
0.732
Si000907m.g
Setaria italica
Si000907m.g
I
0.731
Lus10040063.g
Linum usitatissimum
Lus10040063.g
I
0.729
GSMUA_Achr7G00280_001
Musa acuminata
GSMUA_Achr7G00280_001
I
0.729
Pavir.Eb03517
Panicum virgatum
Pavir.Eb03517
I
0.729
GLYMA06G47000
Glycine max
GLYMA06G47000
I
0.728
MDP0000147309
Malus domestica
MDP0000147309
I
0.726
mgf002965m
Mimulus guttatus
mgf002965m
I
0.726
gene03321-v1.0-hybrid
Fragaria vesca
gene03321-v1.0-hybrid
I
0.725
OB01G43550
Oryza brachyantha
OB01G43550
I
0.723
OGLUM01G20920
Oryza glumaepatula
OGLUM01G20920
I
0.723
ATMYB120
Arabidopsis thaliana
AT5G55020
I
0.723
GAMYB
Oryza sativa
OS01G0812000
I
0.723
GAM1
Oryza indica
BGIOSGA004670
I
0.723
OMERI01G31990
Oryza meridionalis
OMERI01G31990
I
0.723
OLONG_020610
Oryza longistaminata
OLONG_020610
I
0.723
OBART01G34660
Oryza barthii
OBART01G34660
I
0.723
Thhalv10013018m.g
Eutrema salsugineum
Thhalv10013018m.g
I
0.723
GAM1_ORYSI
Oryza sativa
GAM1_ORYSI
D
0.723
Bostr.26833s0761
Boechera stricta
Bostr.26833s0761
I
0.723
Bra002938
Brassica rapa
Bra002938
I
0.723
Carubv10026070m.g
Capsella rubella
Carubv10026070m.g
I
0.723
Bo9g119060
Brassica oleracea
Bo9g119060
I
0.723
Cagra.1629s0073
Capsella grandiflora
Cagra.1629s0073
I
0.723
LjSGA_057622.2
Lotus japonicus
LjSGA_057622.2
I
0.721
Lus10036103.g
Linum usitatissimum
Lus10036103.g
I
0.721
chr3.CM0005.370.nc
Lotus japonicus
chr3.CM0005.370.nc
I
0.721
SapurV1A.0537s0200
Salix purpurea
SapurV1A.0537s0200
I
0.721
Lus10026787.g
Linum usitatissimum
Lus10026787.g
I
0.721
Lus10021539.g
Linum usitatissimum
Lus10021539.g
I
0.720
Pavir.Db00593
Panicum virgatum
Pavir.Db00593
I
0.720
Si006555m.g
Setaria italica
Si006555m.g
I
0.720
cassava30977.valid.m1
Manihot esculenta
cassava30977.valid.m1
I
0.719
Pavir.Ab00447
Panicum virgatum
Pavir.Ab00447
I
0.718
Eucgr.G03183
Eucalyptus grandis
Eucgr.G03183
I
0.718
VIT_13s0067g01630
Vitis vinifera
VIT_13s0067g01630
I
0.718
Cucsa.060080
Cucumis sativus
Cucsa.060080
I
0.717
GLYMA13G25716
Glycine max
GLYMA13G25716
I
0.717
Sb10g027280
Sorghum bicolor
Sb10g027280
I
0.717
PRUPE_ppa017451mg
Prunus persica
PRUPE_ppa017451mg
I
0.716
Pm015094
Prunus mume
Pm015094
I
0.716
SELMODRAFT_128781
Selaginella moellendorffii
SELMODRAFT_128781
I
0.716
MYB101
Vitis vinifera
VIT_12s0059g00700
I
0.716
SELMODRAFT_81112
Selaginella moellendorffii
SELMODRAFT_81112
I
0.716
OMERI06G24960
Oryza meridionalis
OMERI06G24960
I
0.716
ONIVA06G28020
Oryza nivara
ONIVA06G28020
I
0.716
OPUNC06G22490
Oryza punctata
OPUNC06G22490
I
0.716
OS06G0679400
Oryza sativa
OS06G0679400
I
0.716
BGIOSGA020673
Oryza indica
BGIOSGA020673
I
0.716
OGLUM06G26120
Oryza glumaepatula
OGLUM06G26120
I
0.716
ORUFI06G26670
Oryza rufipogon
ORUFI06G26670
I
0.716
TCM_044611
Theobroma cacao
TCM_044611
I
0.715
SapurV1A.0369s0230
Salix purpurea
SapurV1A.0369s0230
I
0.715
Gorai.010G212500
Gossypium raimondii
Gorai.010G212500
I
0.715
cassava1461.valid.m1
Manihot esculenta
cassava1461.valid.m1
I
0.715
POPTR_0001s07330
Populus trichocarpa
POPTR_0001s07330
I
0.715
POPTR_0003s18900
Populus trichocarpa
POPTR_0003s18900
I
0.715
evm.TU.supercontig_33.151
Carica papaya
evm.TU.supercontig_33.151
I
0.715
29686.m000890
Ricinus communis
29686.m000890
I
0.715
MDP0000175835
Malus domestica
MDP0000175835
I
0.714
Aquca_005_00025
Aquilegia coerulea
Aquca_005_00025
I
0.714
TCM_030853
Theobroma cacao
TCM_030853
I
0.714
Gorai.002G089900
Gossypium raimondii
Gorai.002G089900
I
0.714
Gorai.013G159200
Gossypium raimondii
Gorai.013G159200
I
0.714
Sb03g037680
Sorghum bicolor
Sb03g037680
I
0.714
MDP0000308617
Malus domestica
MDP0000308617
I
0.713
MTR_1g021230
Medicago truncatula
MTR_1g021230
I
0.712
GLYMA08G43000
Glycine max
GLYMA08G43000
I
0.712
SELMODRAFT_117411
Selaginella moellendorffii
SELMODRAFT_117411
I
0.711
SELMODRAFT_84369
Selaginella moellendorffii
SELMODRAFT_84369
I
0.711
AMTR_s00037p00177500
Amborella trichopoda
AMTR_s00037p00177500
I
0.711
Solyc07g052300.2
Solanum lycopersicum
Solyc07g052300.2
I
0.710
Lus10035275.g
Linum usitatissimum
Lus10035275.g
I
0.710
Lus10027189.g
Linum usitatissimum
Lus10027189.g
I
0.710
Gorai.009G301100
Gossypium raimondii
Gorai.009G301100
I
0.710
Pavir.Da00077
Panicum virgatum
Pavir.Da00077
I
0.710
PGSC0003DMG400028949
Solanum tuberosum
PGSC0003DMG400028949
I
0.710
mgf019173m
Mimulus guttatus
mgf019173m
I
0.709
F775_00954
Aegilops tauschii
F775_00954
I
0.709
mgf010934m
Mimulus guttatus
mgf010934m
I
0.709
TRIUR3_17146
Triticum urartu
TRIUR3_17146
I
0.709
Traes_7AL_0AD4A7A87
Triticum aestivum
Traes_7AL_0AD4A7A87
I
0.709
gene03323-v1.0-hybrid
Fragaria vesca
gene03323-v1.0-hybrid
I
0.709
Traes_7DL_FAF2AE9FB
Triticum aestivum
Traes_7DL_FAF2AE9FB
I
0.709
MDP0000179306
Malus domestica
MDP0000179306
I
0.709
PRUPE_ppa022465mg
Prunus persica
PRUPE_ppa022465mg
I
0.708
MYB33
Arabidopsis lyrata
fgenesh2_kg.6__546__AT5G06100.3
I
0.707
Cla013880
Citrullus lanatus
Cla013880
I
0.706
Thhalv10013329m.g
Eutrema salsugineum
Thhalv10013329m.g
I
0.706
Cucsa.364400
Cucumis sativus
Cucsa.364400
I
0.706
AMTR_s00038p00150140
Amborella trichopoda
AMTR_s00038p00150140
I
0.706
Gorai.012G022000
Gossypium raimondii
Gorai.012G022000
I
0.706
GSMUA_AchrUn_randomG15100_001
Musa acuminata
GSMUA_AchrUn_randomG15100_001
I
0.706
Ca_21739
Cicer arietinum
Ca_21739
I
0.705
Ca_25013
Cicer arietinum
Ca_25013
I
0.705
MTR_8g042410
Medicago truncatula
MTR_8g042410
I
0.704
MYB97
Arabidopsis lyrata
fgenesh2_kg.7__1539__AT4G26930.1
I
0.703
Cagra.2117s0052
Capsella grandiflora
Cagra.2117s0052
I
0.703
Bo3g021790
Brassica oleracea
Bo3g021790
I
0.703
Bra028997
Brassica rapa
Bra028997
I
0.703
Bostr.13129s0364
Boechera stricta
Bostr.13129s0364
I
0.703
MYB97
Arabidopsis thaliana
AT4G26930
I
0.703
Carubv10000715m.g
Capsella rubella
Carubv10000715m.g
I
0.703
MTR_3g052450
Medicago truncatula
MTR_3g052450
I
0.702
Solyc06g073640.2
Solanum lycopersicum
Solyc06g073640.2
I
0.702
Thhalv10025350m.g
Eutrema salsugineum
Thhalv10025350m.g
I
0.702
BRADI1G32720
Brachypodium distachyon
BRADI1G32720
I
0.702
PGSC0003DMG400005918
Solanum tuberosum
PGSC0003DMG400005918
I
0.702
Eucgr.A01122
Eucalyptus grandis
Eucgr.A01122
I
0.700
PGSC0003DMG400013897
Solanum tuberosum
PGSC0003DMG400013897
I
0.700
MDP0000176798
Malus domestica
MDP0000176798
I
0.700
MDP0000151688
Malus domestica
MDP0000151688
I
0.700
POPTR_0009s02380
Populus trichocarpa
POPTR_0009s02380
I
0.699
SapurV1A.1951s0020
Salix purpurea
SapurV1A.1951s0020
I
0.699
GLYMA04G15150
Glycine max
GLYMA04G15150
I
0.699
GLYMA15G35860
Glycine max
GLYMA15G35860
I
0.698
MTR_3g011610
Medicago truncatula
MTR_3g011610
I
0.698
Solyc01g009070.2
Solanum lycopersicum
Solyc01g009070.2
I
0.697
PGSC0003DMG400022689
Solanum tuberosum
PGSC0003DMG400022689
I
0.697
Thhalv10016567m.g
Eutrema salsugineum
Thhalv10016567m.g
I
0.696
Carubv10025227m.g
Capsella rubella
Carubv10025227m.g
I
0.696
Cagra.0352s0034
Capsella grandiflora
Cagra.0352s0034
I
0.696
PRUPE_ppa019943mg
Prunus persica
PRUPE_ppa019943mg
I
0.695
GSMUA_Achr10G29280_001
Musa acuminata
GSMUA_Achr10G29280_001
I
0.694
VIT_06s0009g02480
Vitis vinifera
VIT_06s0009g02480
I
0.694
PDK_20s1831811g001
Phoenix dactylifera
PDK_20s1831811g001
I
0.693
Aquca_014_00928
Aquilegia coerulea
Aquca_014_00928
I
0.693
GLYMA13G38521
Glycine max
GLYMA13G38521
I
0.692
F775_14392
Aegilops tauschii
F775_14392
I
0.692
LPERR06G20610
Leersia perrieri
LPERR06G20610
I
0.692
Traes_6DS_A0EC5D808
Triticum aestivum
Traes_6DS_A0EC5D808
I
0.692
TRIUR3_22706
Triticum urartu
TRIUR3_22706
I
0.692
Traes_6AS_5562B97F7
Triticum aestivum
Traes_6AS_5562B97F7
I
0.692
evm.TU.supercontig_34.210
Carica papaya
evm.TU.supercontig_34.210
I
0.691
orange1.1g011938m.g
Citrus sinensis
orange1.1g011938m.g
I
0.690
Bra012038
Brassica rapa
Bra012038
I
0.690
Ciclev10014958m.g
Citrus clementina
Ciclev10014958m.g
I
0.690
Ciclev10000756m.g
Citrus clementina
Ciclev10000756m.g
I
0.690
cassava44767.m1
Manihot esculenta
cassava44767.m1
I
0.690
orange1.1g039708m.g
Citrus sinensis
orange1.1g039708m.g
I
0.690
TCM_011907
Theobroma cacao
TCM_011907
I
0.690
29823.m000215
Ricinus communis
29823.m000215
I
0.688
Q9FR42_TOBAC
Nicotiana tabacum
Q9FR42_TOBAC
D
0.688
cassava11031.m1
Manihot esculenta
cassava11031.m1
I
0.688
Gorai.007G312700
Gossypium raimondii
Gorai.007G312700
I
0.686
TCM_041010
Theobroma cacao
TCM_041010
I
0.686
Bra035547
Brassica rapa
Bra035547
I
0.686
VIT_19s0090g00590
Vitis vinifera
VIT_19s0090g00590
I
0.686
mgf020500m
Mimulus guttatus
mgf020500m
I
0.686
29785.m000932
Ricinus communis
29785.m000932
I
0.684
mgf025568m
Mimulus guttatus
mgf025568m
I
0.684
Gorai.006G121900
Gossypium raimondii
Gorai.006G121900
I
0.684
OLONG_019401
Oryza longistaminata
OLONG_019401
I
0.684
SapurV1A.0008s0050
Salix purpurea
SapurV1A.0008s0050
I
0.683
MYB33
Arabidopsis thaliana
AT5G06100
D
0.683
myb.Ph3
Petunia x hybrida
Q02994_PETHY
D
0.683
SELMODRAFT_98669
Selaginella moellendorffii
SELMODRAFT_98669
I
0.682
SELMODRAFT_127220
Selaginella moellendorffii
SELMODRAFT_127220
I
0.682
MYB101
Arabidopsis lyrata
fgenesh2_kg.4__1233__AT2G32460.2
I
0.679
gw1.238.44.1
Physcomitrella patens
gw1.238.44.1
I
0.679
Bostr.23794s0867
Boechera stricta
Bostr.23794s0867
I
0.679
MYB101
Arabidopsis thaliana
AT2G32460
D
0.679
Bo3g026690
Brassica oleracea
Bo3g026690
I
0.679
gw1.66.160.1
Physcomitrella patens
gw1.66.160.1
I
0.679
Bra021791
Brassica rapa
Bra021791
I
0.679
Bo4g178040
Brassica oleracea
Bo4g178040
I
0.678
GRMZM2G161512
Zea mays
GRMZM2G161512
N
0.678
Solyc11g072060.1
Solanum lycopersicum
Solyc11g072060.1
I
0.675
Pm011812
Prunus mume
Pm011812
I
0.675
Ca_15422
Cicer arietinum
Ca_15422
I
0.675
GLYMA12G31950
Glycine max
GLYMA12G31950
I
0.675
Bo4g046000
Brassica oleracea
Bo4g046000
I
0.673
Bra005597
Brassica rapa
Bra005597
I
0.673
SapurV1A.2567s0040
Salix purpurea
SapurV1A.2567s0040
I
0.673
SapurV1A.1897s0070
Salix purpurea
SapurV1A.1897s0070
I
0.673
Bra002042
Brassica rapa
Bra002042
I
0.670
Bostr.19424s1075
Boechera stricta
Bostr.19424s1075
I
0.670
Bo5g136570
Brassica oleracea
Bo5g136570
I
0.670
Bra034842
Brassica rapa
Bra034842
I
0.670
Bo1g141040
Brassica oleracea
Bo1g141040
I
0.670
ATMYB65
Arabidopsis lyrata
fgenesh2_kg.3__1182__AT3G11440.1
I
0.670
Carubv10013393m.g
Capsella rubella
Carubv10013393m.g
I
0.670
ATMYB65
Arabidopsis thaliana
AT3G11440
D
0.670
Cagra.1655s0026
Capsella grandiflora
Cagra.1655s0026
I
0.670
Thhalv10020455m.g
Eutrema salsugineum
Thhalv10020455m.g
I
0.670
Cucsa.148580
Cucumis sativus
Cucsa.148580
I
0.669
PDK_20s1383724g001
Phoenix dactylifera
PDK_20s1383724g001
I
0.668
Ca_07119
Cicer arietinum
Ca_07119
I
0.666
Bo4g076940
Brassica oleracea
Bo4g076940
I
0.665
Ca_06236
Cicer arietinum
Ca_06236
I
0.664
gene23946-v1.0-hybrid
Fragaria vesca
gene23946-v1.0-hybrid
I
0.664
BRADI2G38560
Brachypodium distachyon
BRADI2G38560
I
0.663
Bra022888
Brassica rapa
Bra022888
I
0.663
LPERR05G16930
Leersia perrieri
LPERR05G16930
I
0.662