LPERR03G20110 (Leersia perrieri)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 LPERR03G20110 T273695_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Gam1
M02703_2.00 		Hordeum vulgare
NVYAACSGMC
GKCSGTTRBN		 SELEX
Mathelier et al.(2014)
MA0034.1 		0.705 0.772
Gam1
M11061_2.00 		Hordeum vulgare
YAACSRHM
KDYSGTTR		 Transfac
Matys et al.(2006)
P$GAMYB_01 		0.705 0.772
MYB101
M07051_2.00 		Arabidopsis thaliana
NWHHNWAACCGWWHH
DDWWCGGTTWNDDWN		 Dap-seq
OMalley et al.(2016)
MYB101_col_a 		0.696 0.793
MYB101
M07052_2.00 		Arabidopsis thaliana
DHHHVTAACYGWHWN
NWDWCRGTTABDDDH		 Dap-seq
OMalley et al.(2016)
MYB101_colamp_a 		0.696 0.793
MYB33
M02306_2.00 		Arabidopsis thaliana
HAACNRHHNN
NNDDYNGTTD		 PBM
Weirauch et al.(2014)
pTH8204 		0.688 0.739
MYB33
M07120_2.00 		Arabidopsis thaliana
NTAACYGWHWH
DWDWCRGTTAN		 Dap-seq
OMalley et al.(2016)
MYB33_col_a 		0.688 0.739
GAM1_ORYSI
M11055_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GAMYB_Q2 		0.688 0.761
ATMYB65
M01076_2.00 		Arabidopsis thaliana
HAACNRHHN
NDDYNGTTD		 PBM
Sullivan et al.(2014)
pTH7084 		0.674 0.728
ATMYB65
M07076_2.00 		Arabidopsis thaliana
DHHNTAACBGHMW
WKDCVGTTANDDH		 Dap-seq
OMalley et al.(2016)
MYB65_col200_a 		0.674 0.728
ATMYB65
M07077_2.00 		Arabidopsis thaliana
NTAACYGHMWHNDHN
NDHNDWKDCRGTTAN		 Dap-seq
OMalley et al.(2016)
MYB65_colamp_a 		0.674 0.728
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR03G20110.1 Myb 23 70
LPERR03G20110.1 Myb 76 120

Links

Other Myb/SANT family TFs
Other Leersia perrieri TFs

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.865
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.865
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.865
OBART03G24120 Oryza barthii OBART03G24120 I 0.865
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.865
OS03G0578900 Oryza sativa OS03G0578900 I 0.865
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.865
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.865
OB03G32840 Oryza brachyantha OB03G32840 I 0.856
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.856
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.832
F775_23034 Aegilops tauschii F775_23034 I 0.832
Si039629m.g Setaria italica Si039629m.g I 0.822
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.819
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.813
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.811
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.811
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.802
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.761
LjT02G13.10.nc Lotus japonicus LjT02G13.10.nc I 0.744
Traes_7DS_8DF2537B8 Triticum aestivum Traes_7DS_8DF2537B8 I 0.738
Ca_20081 Cicer arietinum Ca_20081 I 0.727
GLYMA08G42955 Glycine max GLYMA08G42955 I 0.726
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.725
GLYMA08G42920 Glycine max GLYMA08G42920 I 0.724
GLYMA18G10921 Glycine max GLYMA18G10921 I 0.719
MYB97 Arabidopsis thaliana AT4G26930 I 0.719
MYB97 Arabidopsis lyrata fgenesh2_kg.7__1539__AT4G26930.1 I 0.719
Ciclev10010620m.g Citrus clementina Ciclev10010620m.g I 0.717
gene00431-v1.0-hybrid Fragaria vesca gene00431-v1.0-hybrid I 0.717
orange1.1g046419m.g Citrus sinensis orange1.1g046419m.g I 0.717
MTR_3g052430 Medicago truncatula MTR_3g052430 I 0.714
PK15478.1 Cannabis sativa PK15478.1 I 0.712
Lus10040063.g Linum usitatissimum Lus10040063.g I 0.707
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I 0.707
AMTR_s00037p00177500 Amborella trichopoda AMTR_s00037p00177500 I 0.706
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.705
GRMZM2G139688 Zea mays GRMZM2G139688 I 0.705
Gam1 Hordeum vulgare Q96464_HORVU D 0.705
F775_28392 Aegilops tauschii F775_28392 I 0.705
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.705
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.705
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.705
Bra002938 Brassica rapa Bra002938 I 0.702
Bo9g119060 Brassica oleracea Bo9g119060 I 0.702
Bo3g021790 Brassica oleracea Bo3g021790 I 0.702
Thhalv10013018m.g Eutrema salsugineum Thhalv10013018m.g I 0.702
GSMUA_Achr1G17150_001 Musa acuminata GSMUA_Achr1G17150_001 I 0.702
Bra028997 Brassica rapa Bra028997 I 0.702
Carubv10026070m.g Capsella rubella Carubv10026070m.g I 0.702
Cagra.1629s0073 Capsella grandiflora Cagra.1629s0073 I 0.702
Bostr.26833s0761 Boechera stricta Bostr.26833s0761 I 0.702
ATMYB120 Arabidopsis thaliana AT5G55020 I 0.702
Ca_25013 Cicer arietinum Ca_25013 I 0.701
Thhalv10025350m.g Eutrema salsugineum Thhalv10025350m.g I 0.700
Pm016605 Prunus mume Pm016605 I 0.700
PRUPE_ppa003628mg Prunus persica PRUPE_ppa003628mg I 0.700
MDP0000151688 Malus domestica MDP0000151688 I 0.700
MDP0000176798 Malus domestica MDP0000176798 I 0.700
Lus10021539.g Linum usitatissimum Lus10021539.g I 0.698
Pm015094 Prunus mume Pm015094 I 0.698
MYB101 Vitis vinifera VIT_12s0059g00700 I 0.698
PRUPE_ppa017451mg Prunus persica PRUPE_ppa017451mg I 0.698
MDP0000175835 Malus domestica MDP0000175835 I 0.697
Bo3g026690 Brassica oleracea Bo3g026690 I 0.696
Si000907m.g Setaria italica Si000907m.g I 0.696
Bostr.23794s0867 Boechera stricta Bostr.23794s0867 I 0.696
MYB101 Arabidopsis lyrata fgenesh2_kg.4__1233__AT2G32460.2 I 0.696
MYB101 Arabidopsis thaliana AT2G32460 D 0.696
Bra021791 Brassica rapa Bra021791 I 0.696
Bo4g178040 Brassica oleracea Bo4g178040 I 0.695
MDP0000308617 Malus domestica MDP0000308617 I 0.695
MTR_3g011610 Medicago truncatula MTR_3g011610 I 0.694
Pavir.Eb03517 Panicum virgatum Pavir.Eb03517 I 0.694
Aquca_005_00025 Aquilegia coerulea Aquca_005_00025 I 0.693
MDP0000179306 Malus domestica MDP0000179306 I 0.692
cassava40302.m1 Manihot esculenta cassava40302.m1 I 0.692
mgf002965m Mimulus guttatus mgf002965m I 0.691
MDP0000147309 Malus domestica MDP0000147309 I 0.691
mgf010934m Mimulus guttatus mgf010934m I 0.691
mgf019173m Mimulus guttatus mgf019173m I 0.691
Bra005597 Brassica rapa Bra005597 I 0.690
Bo4g046000 Brassica oleracea Bo4g046000 I 0.690
OGLUM01G20920 Oryza glumaepatula OGLUM01G20920 I 0.688
GAM1_ORYSI Oryza sativa GAM1_ORYSI D 0.688
OB01G43550 Oryza brachyantha OB01G43550 I 0.688
OBART01G34660 Oryza barthii OBART01G34660 I 0.688
OLONG_020610 Oryza longistaminata OLONG_020610 I 0.688
GAMYB Oryza sativa OS01G0812000 I 0.688
OMERI01G31990 Oryza meridionalis OMERI01G31990 I 0.688
MYB33 Arabidopsis thaliana AT5G06100 D 0.688
GAM1 Oryza indica BGIOSGA004670 I 0.688
BRADI1G32720 Brachypodium distachyon BRADI1G32720 I 0.687
LjSGA_057622.2 Lotus japonicus LjSGA_057622.2 I 0.686
Traes_7DL_FAF2AE9FB Triticum aestivum Traes_7DL_FAF2AE9FB I 0.686
Lus10036103.g Linum usitatissimum Lus10036103.g I 0.686
cassava44767.m1 Manihot esculenta cassava44767.m1 I 0.686
Lus10026787.g Linum usitatissimum Lus10026787.g I 0.686
TRIUR3_17146 Triticum urartu TRIUR3_17146 I 0.686
Traes_7AL_0AD4A7A87 Triticum aestivum Traes_7AL_0AD4A7A87 I 0.686
F775_00954 Aegilops tauschii F775_00954 I 0.686
Pavir.Ab00447 Panicum virgatum Pavir.Ab00447 I 0.685
chr3.CM0005.370.nc Lotus japonicus chr3.CM0005.370.nc I 0.685
SapurV1A.0537s0200 Salix purpurea SapurV1A.0537s0200 I 0.685
MTR_3g052450 Medicago truncatula MTR_3g052450 I 0.684
MTR_8g042410 Medicago truncatula MTR_8g042410 I 0.684
VIT_13s0067g01630 Vitis vinifera VIT_13s0067g01630 I 0.683
Eucgr.G03183 Eucalyptus grandis Eucgr.G03183 I 0.683
GLYMA13G25716 Glycine max GLYMA13G25716 I 0.682
PGSC0003DMG400013897 Solanum tuberosum PGSC0003DMG400013897 I 0.682
Cla005406 Citrullus lanatus Cla005406 I 0.682
SELMODRAFT_81112 Selaginella moellendorffii SELMODRAFT_81112 I 0.681
SELMODRAFT_128781 Selaginella moellendorffii SELMODRAFT_128781 I 0.681
Lus10008685.g Linum usitatissimum Lus10008685.g I 0.680
evm.TU.supercontig_33.151 Carica papaya evm.TU.supercontig_33.151 I 0.680
Lus10026142.g Linum usitatissimum Lus10026142.g I 0.680
POPTR_0003s18900 Populus trichocarpa POPTR_0003s18900 I 0.680
Gorai.010G212500 Gossypium raimondii Gorai.010G212500 I 0.680
cassava1461.valid.m1 Manihot esculenta cassava1461.valid.m1 I 0.680
TCM_044611 Theobroma cacao TCM_044611 I 0.680
POPTR_0001s07330 Populus trichocarpa POPTR_0001s07330 I 0.680
Si006555m.g Setaria italica Si006555m.g I 0.680
Bra022888 Brassica rapa Bra022888 I 0.680
SapurV1A.0369s0230 Salix purpurea SapurV1A.0369s0230 I 0.680
Pavir.Db00593 Panicum virgatum Pavir.Db00593 I 0.680
29686.m000890 Ricinus communis 29686.m000890 I 0.680
SapurV1A.0008s0050 Salix purpurea SapurV1A.0008s0050 I 0.679
Thhalv10016567m.g Eutrema salsugineum Thhalv10016567m.g I 0.678
Cagra.0352s0034 Capsella grandiflora Cagra.0352s0034 I 0.678
Sb03g037680 Sorghum bicolor Sb03g037680 I 0.678
Carubv10025227m.g Capsella rubella Carubv10025227m.g I 0.678
GLYMA08G43000 Glycine max GLYMA08G43000 I 0.677
gene03323-v1.0-hybrid Fragaria vesca gene03323-v1.0-hybrid I 0.677
gene03321-v1.0-hybrid Fragaria vesca gene03321-v1.0-hybrid I 0.677
Sb10g027280 Sorghum bicolor Sb10g027280 I 0.677
ONIVA06G28020 Oryza nivara ONIVA06G28020 I 0.676
OPUNC06G22490 Oryza punctata OPUNC06G22490 I 0.676
OMERI06G24960 Oryza meridionalis OMERI06G24960 I 0.676
OGLUM06G26120 Oryza glumaepatula OGLUM06G26120 I 0.676
OS06G0679400 Oryza sativa OS06G0679400 I 0.676
ORUFI06G26670 Oryza rufipogon ORUFI06G26670 I 0.676
BGIOSGA020673 Oryza indica BGIOSGA020673 I 0.676
AMTR_s00038p00150140 Amborella trichopoda AMTR_s00038p00150140 I 0.675
Gorai.009G301100 Gossypium raimondii Gorai.009G301100 I 0.675
Bo1g141040 Brassica oleracea Bo1g141040 I 0.674
Bostr.19424s1075 Boechera stricta Bostr.19424s1075 I 0.674
Thhalv10020455m.g Eutrema salsugineum Thhalv10020455m.g I 0.674
Cagra.1655s0026 Capsella grandiflora Cagra.1655s0026 I 0.674
Bra034842 Brassica rapa Bra034842 I 0.674
ATMYB65 Arabidopsis thaliana AT3G11440 D 0.674
Bo5g136570 Brassica oleracea Bo5g136570 I 0.674
Bra002042 Brassica rapa Bra002042 I 0.674
Carubv10013393m.g Capsella rubella Carubv10013393m.g I 0.674
ATMYB65 Arabidopsis lyrata fgenesh2_kg.3__1182__AT3G11440.1 I 0.674
SapurV1A.2567s0040 Salix purpurea SapurV1A.2567s0040 I 0.673
SapurV1A.1897s0070 Salix purpurea SapurV1A.1897s0070 I 0.673
MYB101 Populus trichocarpa POPTR_0002s21300 I 0.673
SELMODRAFT_117411 Selaginella moellendorffii SELMODRAFT_117411 I 0.672
SELMODRAFT_84369 Selaginella moellendorffii SELMODRAFT_84369 I 0.672
MYB33 Arabidopsis lyrata fgenesh2_kg.6__546__AT5G06100.3 I 0.672
Cla013880 Citrullus lanatus Cla013880 I 0.671
Thhalv10013329m.g Eutrema salsugineum Thhalv10013329m.g I 0.671
cassava11031.m1 Manihot esculenta cassava11031.m1 I 0.671
29823.m000215 Ricinus communis 29823.m000215 I 0.671
GSMUA_AchrUn_randomG15100_001 Musa acuminata GSMUA_AchrUn_randomG15100_001 I 0.671
Gorai.012G022000 Gossypium raimondii Gorai.012G022000 I 0.671
Cucsa.364400 Cucumis sativus Cucsa.364400 I 0.671
Ciclev10014958m.g Citrus clementina Ciclev10014958m.g I 0.669
TCM_011907 Theobroma cacao TCM_011907 I 0.669
Pavir.Da00077 Panicum virgatum Pavir.Da00077 I 0.669
Ca_21739 Cicer arietinum Ca_21739 I 0.669
orange1.1g039708m.g Citrus sinensis orange1.1g039708m.g I 0.669
Cagra.2117s0052 Capsella grandiflora Cagra.2117s0052 I 0.668
Bostr.13129s0364 Boechera stricta Bostr.13129s0364 I 0.668
Carubv10000715m.g Capsella rubella Carubv10000715m.g I 0.668
Solyc06g073640.2 Solanum lycopersicum Solyc06g073640.2 I 0.666
PGSC0003DMG400005918 Solanum tuberosum PGSC0003DMG400005918 I 0.666
cassava30977.valid.m1 Manihot esculenta cassava30977.valid.m1 I 0.666
TCM_041010 Theobroma cacao TCM_041010 I 0.666
Gorai.006G121900 Gossypium raimondii Gorai.006G121900 I 0.665
VIT_19s0090g00590 Vitis vinifera VIT_19s0090g00590 I 0.665
Cucsa.060080 Cucumis sativus Cucsa.060080 I 0.665
OLONG_019401 Oryza longistaminata OLONG_019401 I 0.664
Bra035547 Brassica rapa Bra035547 I 0.664
GLYMA15G35860 Glycine max GLYMA15G35860 I 0.663
SapurV1A.1951s0020 Salix purpurea SapurV1A.1951s0020 I 0.663
POPTR_0009s02380 Populus trichocarpa POPTR_0009s02380 I 0.663
PRUPE_ppa019943mg Prunus persica PRUPE_ppa019943mg I 0.662
Gorai.013G159200 Gossypium raimondii Gorai.013G159200 I 0.662
Solyc01g009070.2 Solanum lycopersicum Solyc01g009070.2 I 0.661
PGSC0003DMG400022689 Solanum tuberosum PGSC0003DMG400022689 I 0.661
Gorai.007G312700 Gossypium raimondii Gorai.007G312700 I 0.661