CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA19G02980
(
Glycine max
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
GLYMA19G02980
T271764_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB113
M07026_2.00
Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB
Dap-seq
OMalley et al.(2016)
MYB113_col_a
0.693
0.753
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA19G02980.2
Myb
9
56
KGLWSEVEDTLLRTCVRQYGEGQWHLVPTRAGLNRCRKSCRLRWLNYL
GLYMA19G02980.2
Myb
62
107
RGEFTEDEVDLMQRLHNLLGNRWSLIAGRLPGRTPNDVKNYWNTYI
Links
Other
Myb/SANT
family TFs
Other
Glycine max
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10028513.g
Linum usitatissimum
Lus10028513.g
I
0.748
Lus10009130.g
Linum usitatissimum
Lus10009130.g
I
0.748
Ca_22078
Cicer arietinum
Ca_22078
I
0.737
27763.m000042
Ricinus communis
27763.m000042
I
0.734
GLYMA09G36966
Glycine max
GLYMA09G36966
I
0.733
chr1.CM0141.350.nd
Lotus japonicus
chr1.CM0141.350.nd
I
0.730
GLYMA18G49690
Glycine max
GLYMA18G49690
I
0.720
Eucgr.H04157
Eucalyptus grandis
Eucgr.H04157
I
0.720
Lus10009129.g
Linum usitatissimum
Lus10009129.g
I
0.720
Lus10028514.g
Linum usitatissimum
Lus10028514.g
I
0.720
PK05760.1
Cannabis sativa
PK05760.1
I
0.719
PRUPE_ppa010069mg
Prunus persica
PRUPE_ppa010069mg
I
0.719
Pm029442
Prunus mume
Pm029442
I
0.719
Solyc10g086250.1
Solanum lycopersicum
Solyc10g086250.1
I
0.715
Solyc10g086270.1
Solanum lycopersicum
Solyc10g086270.1
I
0.715
Ciclev10013455m.g
Citrus clementina
Ciclev10013455m.g
I
0.715
Eucgr.F02842
Eucalyptus grandis
Eucgr.F02842
I
0.715
Solyc10g086290.1
Solanum lycopersicum
Solyc10g086290.1
I
0.715
Pm029440
Prunus mume
Pm029440
I
0.713
Gorai.001G087400
Gossypium raimondii
Gorai.001G087400
I
0.712
Gorai.001G087200
Gossypium raimondii
Gorai.001G087200
I
0.712
Lus10042522.g
Linum usitatissimum
Lus10042522.g
I
0.712
PRUPE_ppa026640mg
Prunus persica
PRUPE_ppa026640mg
I
0.710
MDP0000192051
Malus domestica
MDP0000192051
I
0.708
GLYMA09G36983
Glycine max
GLYMA09G36983
I
0.706
PK17827.1
Cannabis sativa
PK17827.1
I
0.705
TCM_019192
Theobroma cacao
TCM_019192
I
0.703
Eucgr.J01553
Eucalyptus grandis
Eucgr.J01553
I
0.701
Eucgr.J01580
Eucalyptus grandis
Eucgr.J01580
I
0.701
Eucgr.J01569
Eucalyptus grandis
Eucgr.J01569
I
0.701
TCM_026054
Theobroma cacao
TCM_026054
I
0.700
Pm029445
Prunus mume
Pm029445
I
0.700
Thhalv10019041m.g
Eutrema salsugineum
Thhalv10019041m.g
I
0.698
MYB90
Arabidopsis thaliana
AT1G66390
I
0.698
Bo6g100940
Brassica oleracea
Bo6g100940
I
0.698
Bostr.26959s0279
Boechera stricta
Bostr.26959s0279
I
0.698
Bo6g099880
Brassica oleracea
Bo6g099880
I
0.698
MYB114
Arabidopsis thaliana
AT1G66380
I
0.698
Bra004162
Brassica rapa
Bra004162
I
0.698
PAP1
Arabidopsis lyrata
fgenesh2_kg.1__4777__AT1G56650.1
I
0.698
MYB75
Arabidopsis thaliana
AT1G56650
I
0.698
Aquca_015_00088
Aquilegia coerulea
Aquca_015_00088
I
0.698
ATMYB90
Arabidopsis lyrata
scaffold_201358.1
I
0.698
Solyc10g086260.1
Solanum lycopersicum
Solyc10g086260.1
I
0.698
Eucgr.J01586
Eucalyptus grandis
Eucgr.J01586
I
0.697
gene31413-v1.0-hybrid
Fragaria vesca
gene31413-v1.0-hybrid
I
0.696
Carubv10020856m.g
Capsella rubella
Carubv10020856m.g
I
0.696
Cagra.2400s0001
Capsella grandiflora
Cagra.2400s0001
I
0.696
Cagra.2629s0007
Capsella grandiflora
Cagra.2629s0007
I
0.695
MTR_0197s0010
Medicago truncatula
MTR_0197s0010
I
0.693
mgf019317m
Mimulus guttatus
mgf019317m
I
0.693
GLYMA07G16980
Glycine max
GLYMA07G16980
I
0.693
VIT_02s0033g00450
Vitis vinifera
VIT_02s0033g00450
I
0.693
GLYMA18G41520
Glycine max
GLYMA18G41520
I
0.693
Ca_19630
Cicer arietinum
Ca_19630
I
0.693
VIT_02s0033g00410
Vitis vinifera
VIT_02s0033g00410
I
0.693
MYB113
Arabidopsis thaliana
AT1G66370
D
0.693
scaffold_201357.1
Arabidopsis lyrata
scaffold_201357.1
I
0.692
Eucgr.J01578
Eucalyptus grandis
Eucgr.J01578
I
0.690
MTR_8g060940
Medicago truncatula
MTR_8g060940
I
0.689
Aquca_047_00006
Aquilegia coerulea
Aquca_047_00006
I
0.689
Aquca_015_00090
Aquilegia coerulea
Aquca_015_00090
I
0.689
Eucgr.J01576
Eucalyptus grandis
Eucgr.J01576
I
0.689
GLYMA09G37010
Glycine max
GLYMA09G37010
I
0.688
Bra001917
Brassica rapa
Bra001917
I
0.688
Bo00835s060
Brassica oleracea
Bo00835s060
I
0.687
Bra039763
Brassica rapa
Bra039763
I
0.687
VIT_14s0006g01290
Vitis vinifera
VIT_14s0006g01290
I
0.686
30128.m008730
Ricinus communis
30128.m008730
I
0.684
PRUPE_ppa020385mg
Prunus persica
PRUPE_ppa020385mg
I
0.682
PGSC0003DMG400012126
Solanum tuberosum
PGSC0003DMG400012126
I
0.682
Solyc08g082890.2
Solanum lycopersicum
Solyc08g082890.2
I
0.682
Cagra.0463s0008
Capsella grandiflora
Cagra.0463s0008
I
0.681
MYB113
Arabidopsis lyrata
fgenesh2_kg.2__869__AT1G66370.1
I
0.680
Gorai.007G268800
Gossypium raimondii
Gorai.007G268800
I
0.680
Eucgr.J01573
Eucalyptus grandis
Eucgr.J01573
I
0.680
Eucgr.J01555
Eucalyptus grandis
Eucgr.J01555
I
0.680
chr1.LjT44L17.240.nd
Lotus japonicus
chr1.LjT44L17.240.nd
I
0.676
MTR_5g079290
Medicago truncatula
MTR_5g079290
I
0.676
PRUPE_ppa016711mg
Prunus persica
PRUPE_ppa016711mg
I
0.676
Pm025429
Prunus mume
Pm025429
I
0.675
Pm031337
Prunus mume
Pm031337
I
0.675
Cagra.0463s0007
Capsella grandiflora
Cagra.0463s0007
I
0.674
evm.TU.supercontig_51.67
Carica papaya
evm.TU.supercontig_51.67
I
0.673
GLYMA18G49670
Glycine max
GLYMA18G49670
I
0.672
MTR_5g079220
Medicago truncatula
MTR_5g079220
I
0.672
VIT_02s0033g00390
Vitis vinifera
VIT_02s0033g00390
I
0.670
Cucsa.277570
Cucumis sativus
Cucsa.277570
I
0.669
MTR_5g078950
Medicago truncatula
MTR_5g078950
I
0.669
Carubv10020888m.g
Capsella rubella
Carubv10020888m.g
I
0.667
Gorai.013G118300
Gossypium raimondii
Gorai.013G118300
I
0.665
POPTR_0005s14480
Populus trichocarpa
POPTR_0005s14480
I
0.664
VIT_02s0033g00400
Vitis vinifera
VIT_02s0033g00400
I
0.664
VIT_02s0033g00430
Vitis vinifera
VIT_02s0033g00430
I
0.664