CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MYB90
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT1G66390
T266360_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB113
M07026_2.00
Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB
Dap-seq
OMalley et al.(2016)
MYB113_col_a
0.826
0.892
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G66390.1
Myb
10
57
KGAWTAEEDSLLRLCIDKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYL
AT1G66390.1
Myb
63
108
RGRLSNDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
165 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATMYB90
Arabidopsis lyrata
scaffold_201358.1
I
0.892
Bostr.26959s0279
Boechera stricta
Bostr.26959s0279
I
0.889
Thhalv10019041m.g
Eutrema salsugineum
Thhalv10019041m.g
I
0.876
MYB114
Arabidopsis thaliana
AT1G66380
I
0.876
PAP1
Arabidopsis lyrata
fgenesh2_kg.1__4777__AT1G56650.1
I
0.872
scaffold_201357.1
Arabidopsis lyrata
scaffold_201357.1
I
0.871
Bo6g099880
Brassica oleracea
Bo6g099880
I
0.867
Bo00835s060
Brassica oleracea
Bo00835s060
I
0.866
Bra001917
Brassica rapa
Bra001917
I
0.866
Bra039763
Brassica rapa
Bra039763
I
0.866
Bra004162
Brassica rapa
Bra004162
I
0.864
Bo6g100940
Brassica oleracea
Bo6g100940
I
0.864
Cagra.2629s0007
Capsella grandiflora
Cagra.2629s0007
I
0.861
Carubv10020856m.g
Capsella rubella
Carubv10020856m.g
I
0.859
Cagra.2400s0001
Capsella grandiflora
Cagra.2400s0001
I
0.859
MYB75
Arabidopsis thaliana
AT1G56650
I
0.855
MYB113
Arabidopsis lyrata
fgenesh2_kg.2__869__AT1G66370.1
I
0.843
Gorai.001G087400
Gossypium raimondii
Gorai.001G087400
I
0.836
Gorai.001G087200
Gossypium raimondii
Gorai.001G087200
I
0.836
PK05760.1
Cannabis sativa
PK05760.1
I
0.831
Ciclev10013455m.g
Citrus clementina
Ciclev10013455m.g
I
0.831
Carubv10020888m.g
Capsella rubella
Carubv10020888m.g
I
0.830
Cagra.0463s0007
Capsella grandiflora
Cagra.0463s0007
I
0.829
TCM_019192
Theobroma cacao
TCM_019192
I
0.827
Cagra.0463s0006
Capsella grandiflora
Cagra.0463s0006
I
0.827
Solyc10g086290.1
Solanum lycopersicum
Solyc10g086290.1
I
0.827
MYB113
Arabidopsis thaliana
AT1G66370
D
0.826
Solyc10g086250.1
Solanum lycopersicum
Solyc10g086250.1
I
0.826
Solyc10g086270.1
Solanum lycopersicum
Solyc10g086270.1
I
0.823
Solyc10g086260.1
Solanum lycopersicum
Solyc10g086260.1
I
0.823
Cagra.0463s0008
Capsella grandiflora
Cagra.0463s0008
I
0.822
Pm029445
Prunus mume
Pm029445
I
0.821
fgenesh1_pg.C_scaffold_2000950
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000950
I
0.814
VIT_02s0033g00450
Vitis vinifera
VIT_02s0033g00450
I
0.809
VIT_02s0033g00410
Vitis vinifera
VIT_02s0033g00410
I
0.809
evm.TU.supercontig_2742.1
Carica papaya
evm.TU.supercontig_2742.1
I
0.806
evm.TU.supercontig_116.38
Carica papaya
evm.TU.supercontig_116.38
I
0.806
mgf019317m
Mimulus guttatus
mgf019317m
I
0.805
PK17827.1
Cannabis sativa
PK17827.1
I
0.805
VIT_14s0006g01290
Vitis vinifera
VIT_14s0006g01290
I
0.804
MTR_5g079290
Medicago truncatula
MTR_5g079290
I
0.799
scaffold_201356.1
Arabidopsis lyrata
scaffold_201356.1
I
0.798
MTR_8g060940
Medicago truncatula
MTR_8g060940
I
0.798
Pm029442
Prunus mume
Pm029442
I
0.794
MTR_5g078950
Medicago truncatula
MTR_5g078950
I
0.793
MTR_5g079220
Medicago truncatula
MTR_5g079220
I
0.788
Pm029440
Prunus mume
Pm029440
I
0.788
27763.m000042
Ricinus communis
27763.m000042
I
0.787
PRUPE_ppa026640mg
Prunus persica
PRUPE_ppa026640mg
I
0.785
VIT_02s0033g00390
Vitis vinifera
VIT_02s0033g00390
I
0.785
MTR_0001s0360
Medicago truncatula
MTR_0001s0360
I
0.784
MTR_5g078800
Medicago truncatula
MTR_5g078800
I
0.784
MTR_5g078860
Medicago truncatula
MTR_5g078860
I
0.783
MTR_5g078910
Medicago truncatula
MTR_5g078910
I
0.781
Lus10042522.g
Linum usitatissimum
Lus10042522.g
I
0.781
TCM_026054
Theobroma cacao
TCM_026054
I
0.769
Eucgr.H04157
Eucalyptus grandis
Eucgr.H04157
I
0.767
Aquca_047_00006
Aquilegia coerulea
Aquca_047_00006
I
0.765
MTR_5g079120
Medicago truncatula
MTR_5g079120
I
0.764
MTR_7g017260
Medicago truncatula
MTR_7g017260
I
0.762
Gorai.007G268800
Gossypium raimondii
Gorai.007G268800
I
0.761
gene31413-v1.0-hybrid
Fragaria vesca
gene31413-v1.0-hybrid
I
0.761
GLYMA09G36966
Glycine max
GLYMA09G36966
I
0.761
Gorai.013G118300
Gossypium raimondii
Gorai.013G118300
I
0.759
VIT_02s0033g00400
Vitis vinifera
VIT_02s0033g00400
I
0.758
Lus10009130.g
Linum usitatissimum
Lus10009130.g
I
0.755
Lus10028513.g
Linum usitatissimum
Lus10028513.g
I
0.755
Ca_22078
Cicer arietinum
Ca_22078
I
0.753
VIT_14s0006g01280
Vitis vinifera
VIT_14s0006g01280
I
0.750
MTR_5g078930
Medicago truncatula
MTR_5g078930
I
0.748
GLYMA18G49690
Glycine max
GLYMA18G49690
I
0.748
MTR_0197s0010
Medicago truncatula
MTR_0197s0010
I
0.744
chr1.LjT44L17.240.nd
Lotus japonicus
chr1.LjT44L17.240.nd
I
0.744
Ca_19630
Cicer arietinum
Ca_19630
I
0.744
GLYMA18G41520
Glycine max
GLYMA18G41520
I
0.744
Eucgr.F02842
Eucalyptus grandis
Eucgr.F02842
I
0.743
chr1.CM0141.350.nd
Lotus japonicus
chr1.CM0141.350.nd
I
0.743
30128.m008730
Ricinus communis
30128.m008730
I
0.741
GLYMA07G16980
Glycine max
GLYMA07G16980
I
0.740
PRUPE_ppa016711mg
Prunus persica
PRUPE_ppa016711mg
I
0.740
MDP0000192051
Malus domestica
MDP0000192051
I
0.738
Cucsa.277570
Cucumis sativus
Cucsa.277570
I
0.736
MTR_0247s0040
Medicago truncatula
MTR_0247s0040
I
0.733
Lus10009129.g
Linum usitatissimum
Lus10009129.g
I
0.729
Lus10028514.g
Linum usitatissimum
Lus10028514.g
I
0.729
VIT_14s0006g01340
Vitis vinifera
VIT_14s0006g01340
I
0.728
VIT_02s0033g00430
Vitis vinifera
VIT_02s0033g00430
I
0.728
PRUPE_ppa010069mg
Prunus persica
PRUPE_ppa010069mg
I
0.727
evm.TU.contig_42663.2
Carica papaya
evm.TU.contig_42663.2
I
0.725
mgf022565m
Mimulus guttatus
mgf022565m
I
0.724
evm.TU.supercontig_51.67
Carica papaya
evm.TU.supercontig_51.67
I
0.720
Aquca_015_00088
Aquilegia coerulea
Aquca_015_00088
I
0.718
GLYMA09G37010
Glycine max
GLYMA09G37010
I
0.716
POPTR_0005s14480
Populus trichocarpa
POPTR_0005s14480
I
0.715
PRUPE_ppa020385mg
Prunus persica
PRUPE_ppa020385mg
I
0.713
Pm031337
Prunus mume
Pm031337
I
0.712
Pm025429
Prunus mume
Pm025429
I
0.712
Eucgr.J01580
Eucalyptus grandis
Eucgr.J01580
I
0.711
PDK_20s1447601g001
Phoenix dactylifera
PDK_20s1447601g001
I
0.709
POPTR_0005s14460
Populus trichocarpa
POPTR_0005s14460
I
0.707
POPTR_0005s14470
Populus trichocarpa
POPTR_0005s14470
I
0.707
SapurV1A.0230s0260
Salix purpurea
SapurV1A.0230s0260
I
0.707
Eucgr.J01586
Eucalyptus grandis
Eucgr.J01586
I
0.706
POPTR_0005s14450
Populus trichocarpa
POPTR_0005s14450
I
0.705
Aquca_015_00090
Aquilegia coerulea
Aquca_015_00090
I
0.703
MTR_0193s0090
Medicago truncatula
MTR_0193s0090
I
0.701
Eucgr.J01569
Eucalyptus grandis
Eucgr.J01569
I
0.700
Lus10003277.g
Linum usitatissimum
Lus10003277.g
I
0.700
GLYMA18G49670
Glycine max
GLYMA18G49670
I
0.700
Eucgr.J01553
Eucalyptus grandis
Eucgr.J01553
I
0.700
SapurV1A.0230s0240
Salix purpurea
SapurV1A.0230s0240
I
0.700
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.699
GLYMA19G02980
Glycine max
GLYMA19G02980
I
0.698
MDP0000478453
Malus domestica
MDP0000478453
I
0.696
Si038905m.g
Setaria italica
Si038905m.g
I
0.695
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.695
Eucgr.J01578
Eucalyptus grandis
Eucgr.J01578
I
0.690
Eucgr.J01555
Eucalyptus grandis
Eucgr.J01555
I
0.689
Eucgr.J01573
Eucalyptus grandis
Eucgr.J01573
I
0.689
Eucgr.J01576
Eucalyptus grandis
Eucgr.J01576
I
0.688
LjSGA_029658.1
Lotus japonicus
LjSGA_029658.1
I
0.685
ORGLA03G0196700
Oryza glaberrima
ORGLA03G0196700
I
0.685
GLYMA07G04240
Glycine max
GLYMA07G04240
I
0.683
GLYMA16G00931
Glycine max
GLYMA16G00931
I
0.683
SapurV1A.0710s0070
Salix purpurea
SapurV1A.0710s0070
I
0.682
POPTR_0006s23840
Populus trichocarpa
POPTR_0006s23840
I
0.682
PRUPE_ppa024074mg
Prunus persica
PRUPE_ppa024074mg
I
0.681
Pm027047
Prunus mume
Pm027047
I
0.681
AMTR_s00024p00224850
Amborella trichopoda
AMTR_s00024p00224850
I
0.680
VIT_04s0008g01810
Vitis vinifera
VIT_04s0008g01810
I
0.680
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.678
Gorai.001G020600
Gossypium raimondii
Gorai.001G020600
I
0.676
SapurV1A.0230s0250
Salix purpurea
SapurV1A.0230s0250
I
0.676
Aquca_015_00085
Aquilegia coerulea
Aquca_015_00085
I
0.675
PRUPE_ppa023812mg
Prunus persica
PRUPE_ppa023812mg
I
0.675
POPTR_0005s14490
Populus trichocarpa
POPTR_0005s14490
I
0.675
GSMUA_Achr3G07940_001
Musa acuminata
GSMUA_Achr3G07940_001
I
0.674
PDK_20s1554342g001
Phoenix dactylifera
PDK_20s1554342g001
I
0.674
MTR_4g125520
Medicago truncatula
MTR_4g125520
I
0.674
evm.TU.supercontig_126.33
Carica papaya
evm.TU.supercontig_126.33
I
0.671
GLYMA09G36983
Glycine max
GLYMA09G36983
I
0.670
Carubv10022245m.g
Capsella rubella
Carubv10022245m.g
N
0.669
Pm005571
Prunus mume
Pm005571
I
0.669
Eucgr.J01574
Eucalyptus grandis
Eucgr.J01574
I
0.668
mgf019036m
Mimulus guttatus
mgf019036m
N
0.668
Ciclev10009286m.g
Citrus clementina
Ciclev10009286m.g
I
0.667
Gorai.001G015200
Gossypium raimondii
Gorai.001G015200
I
0.667
orange1.1g025602m.g
Citrus sinensis
orange1.1g025602m.g
I
0.667
AMTR_s00024p00224470
Amborella trichopoda
AMTR_s00024p00224470
I
0.666
gene15392-v1.0-hybrid
Fragaria vesca
gene15392-v1.0-hybrid
I
0.665
GSMUA_Achr6G04400_001
Musa acuminata
GSMUA_Achr6G04400_001
I
0.665
Pm005570
Prunus mume
Pm005570
I
0.665
TCM_037376
Theobroma cacao
TCM_037376
I
0.665
GSMUA_Achr8G22690_001
Musa acuminata
GSMUA_Achr8G22690_001
I
0.665
MDP0000031172
Malus domestica
MDP0000031172
I
0.665
PRUPE_ppa022205mg
Prunus persica
PRUPE_ppa022205mg
I
0.665
MDP0000210851
Malus domestica
MDP0000210851
I
0.665
VIT_04s0008g01800
Vitis vinifera
VIT_04s0008g01800
I
0.665
Ca_03154
Cicer arietinum
Ca_03154
I
0.665
TCM_004509
Theobroma cacao
TCM_004509
I
0.665
PRUPE_ppa023789mg
Prunus persica
PRUPE_ppa023789mg
I
0.665
TCM_037559
Theobroma cacao
TCM_037559
I
0.665
GSMUA_Achr7G18560_001
Musa acuminata
GSMUA_Achr7G18560_001
I
0.664
Eucgr.C00722
Eucalyptus grandis
Eucgr.C00722
I
0.661
POPTR_0019s05210
Populus trichocarpa
POPTR_0019s05210
I
0.661