CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_7g017260
(
Medicago truncatula
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
MTR_7g017260
T274915_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYB113
M07026_2.00
Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB
Dap-seq
OMalley et al.(2016)
MYB113_col_a
0.742
0.785
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES77790
Myb
27
76
KGAWTYEEDNLLKAYINKYGEGKWHLIPQRAGSGLNRCRKSCRLRWINYL
AES77790
Myb
82
127
RKSFSEDEVDMILRLHKLLGNRWSLIAGRLPGRTANSVKNYWNTHL
Links
Other
Myb/SANT
family TFs
Other
Medicago truncatula
TFs
125 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_5g079120
Medicago truncatula
MTR_5g079120
I
0.856
MTR_5g079290
Medicago truncatula
MTR_5g079290
I
0.828
MTR_5g078910
Medicago truncatula
MTR_5g078910
I
0.825
MTR_5g079220
Medicago truncatula
MTR_5g079220
I
0.821
MTR_5g078860
Medicago truncatula
MTR_5g078860
I
0.821
MTR_0001s0360
Medicago truncatula
MTR_0001s0360
I
0.816
MTR_5g078800
Medicago truncatula
MTR_5g078800
I
0.816
MTR_5g078930
Medicago truncatula
MTR_5g078930
I
0.786
MTR_5g078950
Medicago truncatula
MTR_5g078950
I
0.777
Bo6g099880
Brassica oleracea
Bo6g099880
I
0.771
Bo6g100940
Brassica oleracea
Bo6g100940
I
0.768
Bra004162
Brassica rapa
Bra004162
I
0.768
Gorai.001G087400
Gossypium raimondii
Gorai.001G087400
I
0.766
Gorai.001G087200
Gossypium raimondii
Gorai.001G087200
I
0.766
Pm029445
Prunus mume
Pm029445
I
0.762
MYB75
Arabidopsis thaliana
AT1G56650
I
0.762
MYB114
Arabidopsis thaliana
AT1G66380
I
0.762
Thhalv10019041m.g
Eutrema salsugineum
Thhalv10019041m.g
I
0.762
Cagra.2629s0007
Capsella grandiflora
Cagra.2629s0007
I
0.762
ATMYB90
Arabidopsis lyrata
scaffold_201358.1
I
0.762
PAP1
Arabidopsis lyrata
fgenesh2_kg.1__4777__AT1G56650.1
I
0.762
MYB90
Arabidopsis thaliana
AT1G66390
I
0.762
Bostr.26959s0279
Boechera stricta
Bostr.26959s0279
I
0.759
TCM_019192
Theobroma cacao
TCM_019192
I
0.757
scaffold_201357.1
Arabidopsis lyrata
scaffold_201357.1
I
0.757
Bra001917
Brassica rapa
Bra001917
I
0.752
MTR_8g060940
Medicago truncatula
MTR_8g060940
I
0.751
Solyc10g086290.1
Solanum lycopersicum
Solyc10g086290.1
I
0.751
Bo00835s060
Brassica oleracea
Bo00835s060
I
0.751
Bra039763
Brassica rapa
Bra039763
I
0.751
Cagra.0463s0008
Capsella grandiflora
Cagra.0463s0008
I
0.751
Ciclev10013455m.g
Citrus clementina
Ciclev10013455m.g
I
0.751
PK05760.1
Cannabis sativa
PK05760.1
I
0.750
Solyc10g086270.1
Solanum lycopersicum
Solyc10g086270.1
I
0.747
Solyc10g086260.1
Solanum lycopersicum
Solyc10g086260.1
I
0.747
Cagra.0463s0006
Capsella grandiflora
Cagra.0463s0006
I
0.746
Carubv10020856m.g
Capsella rubella
Carubv10020856m.g
I
0.745
Cagra.2400s0001
Capsella grandiflora
Cagra.2400s0001
I
0.745
MTR_0247s0040
Medicago truncatula
MTR_0247s0040
I
0.743
MYB113
Arabidopsis thaliana
AT1G66370
D
0.742
Pm029442
Prunus mume
Pm029442
I
0.741
Solyc10g086250.1
Solanum lycopersicum
Solyc10g086250.1
I
0.741
Eucgr.F02842
Eucalyptus grandis
Eucgr.F02842
I
0.739
PRUPE_ppa026640mg
Prunus persica
PRUPE_ppa026640mg
I
0.738
GLYMA07G16980
Glycine max
GLYMA07G16980
I
0.736
MTR_0197s0010
Medicago truncatula
MTR_0197s0010
I
0.736
GLYMA18G41520
Glycine max
GLYMA18G41520
I
0.736
Ca_19630
Cicer arietinum
Ca_19630
I
0.736
Pm029440
Prunus mume
Pm029440
I
0.735
Eucgr.H04157
Eucalyptus grandis
Eucgr.H04157
I
0.734
PK17827.1
Cannabis sativa
PK17827.1
I
0.734
MYB113
Arabidopsis lyrata
fgenesh2_kg.2__869__AT1G66370.1
I
0.729
VIT_14s0006g01290
Vitis vinifera
VIT_14s0006g01290
I
0.728
gene31413-v1.0-hybrid
Fragaria vesca
gene31413-v1.0-hybrid
I
0.726
VIT_02s0033g00450
Vitis vinifera
VIT_02s0033g00450
I
0.725
VIT_02s0033g00410
Vitis vinifera
VIT_02s0033g00410
I
0.725
Lus10042522.g
Linum usitatissimum
Lus10042522.g
I
0.725
chr1.LjT44L17.240.nd
Lotus japonicus
chr1.LjT44L17.240.nd
I
0.719
evm.TU.supercontig_51.67
Carica papaya
evm.TU.supercontig_51.67
I
0.718
Carubv10020888m.g
Capsella rubella
Carubv10020888m.g
I
0.715
PRUPE_ppa016711mg
Prunus persica
PRUPE_ppa016711mg
I
0.713
Aquca_047_00006
Aquilegia coerulea
Aquca_047_00006
I
0.712
MTR_0193s0090
Medicago truncatula
MTR_0193s0090
I
0.711
TCM_026054
Theobroma cacao
TCM_026054
I
0.710
Cagra.0463s0007
Capsella grandiflora
Cagra.0463s0007
I
0.708
mgf019317m
Mimulus guttatus
mgf019317m
I
0.708
27763.m000042
Ricinus communis
27763.m000042
I
0.707
GLYMA09G36966
Glycine max
GLYMA09G36966
I
0.707
GLYMA09G37010
Glycine max
GLYMA09G37010
I
0.706
Gorai.007G268800
Gossypium raimondii
Gorai.007G268800
I
0.704
evm.TU.supercontig_116.38
Carica papaya
evm.TU.supercontig_116.38
I
0.704
evm.TU.supercontig_2742.1
Carica papaya
evm.TU.supercontig_2742.1
I
0.704
Gorai.013G118300
Gossypium raimondii
Gorai.013G118300
I
0.704
VIT_02s0033g00390
Vitis vinifera
VIT_02s0033g00390
I
0.701
fgenesh1_pg.C_scaffold_2000950
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000950
I
0.700
Ca_22078
Cicer arietinum
Ca_22078
I
0.696
scaffold_201356.1
Arabidopsis lyrata
scaffold_201356.1
I
0.693
Lus10009130.g
Linum usitatissimum
Lus10009130.g
I
0.692
Lus10028513.g
Linum usitatissimum
Lus10028513.g
I
0.692
chr1.CM0141.350.nd
Lotus japonicus
chr1.CM0141.350.nd
I
0.690
GLYMA18G49670
Glycine max
GLYMA18G49670
I
0.690
GLYMA18G49690
Glycine max
GLYMA18G49690
I
0.690
Pm025429
Prunus mume
Pm025429
I
0.688
Pm031337
Prunus mume
Pm031337
I
0.688
Eucgr.J01573
Eucalyptus grandis
Eucgr.J01573
I
0.687
Eucgr.J01555
Eucalyptus grandis
Eucgr.J01555
I
0.687
Ciclev10017654m.g
Citrus clementina
Ciclev10017654m.g
I
0.687
Eucgr.J01580
Eucalyptus grandis
Eucgr.J01580
I
0.687
orange1.1g044864m.g
Citrus sinensis
orange1.1g044864m.g
I
0.687
Cucsa.277570
Cucumis sativus
Cucsa.277570
I
0.686
VIT_02s0033g00400
Vitis vinifera
VIT_02s0033g00400
I
0.685
Si038905m.g
Setaria italica
Si038905m.g
I
0.684
Eucgr.J01586
Eucalyptus grandis
Eucgr.J01586
I
0.683
PRUPE_ppa010069mg
Prunus persica
PRUPE_ppa010069mg
I
0.679
MDP0000872821
Malus domestica
MDP0000872821
I
0.678
Eucgr.J01553
Eucalyptus grandis
Eucgr.J01553
I
0.677
Eucgr.J01569
Eucalyptus grandis
Eucgr.J01569
I
0.677
PRUPE_ppa020385mg
Prunus persica
PRUPE_ppa020385mg
I
0.676
MDP0000192051
Malus domestica
MDP0000192051
I
0.675
gene09407-v1.0-hybrid
Fragaria vesca
gene09407-v1.0-hybrid
I
0.675
30128.m008730
Ricinus communis
30128.m008730
I
0.674
SapurV1A.0230s0240
Salix purpurea
SapurV1A.0230s0240
I
0.673
cassava36364.valid.m1
Manihot esculenta
cassava36364.valid.m1
I
0.671
VIT_14s0006g01280
Vitis vinifera
VIT_14s0006g01280
I
0.670
PDK_20s1447601g001
Phoenix dactylifera
PDK_20s1447601g001
I
0.669
mgf022565m
Mimulus guttatus
mgf022565m
I
0.668
Aquca_015_00088
Aquilegia coerulea
Aquca_015_00088
I
0.667
Sb01g032770
Sorghum bicolor
Sb01g032770
I
0.667
Gorai.001G020400
Gossypium raimondii
Gorai.001G020400
I
0.667
Eucgr.J01574
Eucalyptus grandis
Eucgr.J01574
I
0.666
Pm025103
Prunus mume
Pm025103
I
0.665
Eucgr.B00865
Eucalyptus grandis
Eucgr.B00865
I
0.665
PRUPE_ppa019522mg
Prunus persica
PRUPE_ppa019522mg
I
0.665
VIT_01s0011g04760
Vitis vinifera
VIT_01s0011g04760
I
0.664
TCM_010839
Theobroma cacao
TCM_010839
I
0.664
POPTR_0010s12420
Populus trichocarpa
POPTR_0010s12420
I
0.664
cassava29110.valid.m1
Manihot esculenta
cassava29110.valid.m1
I
0.664
Eucgr.J01576
Eucalyptus grandis
Eucgr.J01576
I
0.664
MDP0000250597
Malus domestica
MDP0000250597
I
0.664
Eucgr.G02195
Eucalyptus grandis
Eucgr.G02195
I
0.664
GLYMA09G36983
Glycine max
GLYMA09G36983
I
0.663
Eucgr.J01578
Eucalyptus grandis
Eucgr.J01578
I
0.662
PRUPE_ppa011954mg
Prunus persica
PRUPE_ppa011954mg
I
0.661
Pm025102
Prunus mume
Pm025102
I
0.661
gene09406-v1.0-hybrid
Fragaria vesca
gene09406-v1.0-hybrid
I
0.661