30128.m008730 (Ricinus communis)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00249 (Myb_DNA-binding) IPR014778 30128.m008730 T283874_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MYB113
M07026_2.00 		Arabidopsis thaliana
VTAACKRAHTH
DADTYMGTTAB		 Dap-seq
OMalley et al.(2016)
MYB113_col_a 		0.732 0.763
Q2TCH0_PETHY
M11072_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PH4_01 		0.661 0.656
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30128.m008730 Myb 34 81
30128.m008730 Myb 87 132

Links

Other Myb/SANT family TFs
Other Ricinus communis TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Lus10009130.g Linum usitatissimum Lus10009130.g I 0.762
Lus10028513.g Linum usitatissimum Lus10028513.g I 0.762
Cagra.2400s0001 Capsella grandiflora Cagra.2400s0001 I 0.758
Carubv10020856m.g Capsella rubella Carubv10020856m.g I 0.758
Pm029445 Prunus mume Pm029445 I 0.757
Solyc10g086260.1 Solanum lycopersicum Solyc10g086260.1 I 0.756
Solyc10g086270.1 Solanum lycopersicum Solyc10g086270.1 I 0.756
Solyc10g086290.1 Solanum lycopersicum Solyc10g086290.1 I 0.753
Bra001917 Brassica rapa Bra001917 I 0.751
Aquca_047_00006 Aquilegia coerulea Aquca_047_00006 I 0.749
Bostr.26959s0279 Boechera stricta Bostr.26959s0279 I 0.744
MYB113 Arabidopsis lyrata fgenesh2_kg.2__869__AT1G66370.1 I 0.744
Bo6g100940 Brassica oleracea Bo6g100940 I 0.744
Solyc10g086250.1 Solanum lycopersicum Solyc10g086250.1 I 0.742
Bo6g099880 Brassica oleracea Bo6g099880 I 0.741
MYB90 Arabidopsis thaliana AT1G66390 I 0.741
ATMYB90 Arabidopsis lyrata scaffold_201358.1 I 0.741
Lus10009129.g Linum usitatissimum Lus10009129.g I 0.741
MYB114 Arabidopsis thaliana AT1G66380 I 0.741
Cagra.2629s0007 Capsella grandiflora Cagra.2629s0007 I 0.741
Thhalv10019041m.g Eutrema salsugineum Thhalv10019041m.g I 0.741
PAP1 Arabidopsis lyrata fgenesh2_kg.1__4777__AT1G56650.1 I 0.741
Lus10028514.g Linum usitatissimum Lus10028514.g I 0.741
Bra004162 Brassica rapa Bra004162 I 0.741
MYB75 Arabidopsis thaliana AT1G56650 I 0.741
Ciclev10013455m.g Citrus clementina Ciclev10013455m.g I 0.740
Gorai.001G087400 Gossypium raimondii Gorai.001G087400 I 0.737
Gorai.001G087200 Gossypium raimondii Gorai.001G087200 I 0.737
POPTR_0005s14450 Populus trichocarpa POPTR_0005s14450 I 0.736
scaffold_201357.1 Arabidopsis lyrata scaffold_201357.1 I 0.735
MYB113 Arabidopsis thaliana AT1G66370 D 0.732
PK05760.1 Cannabis sativa PK05760.1 I 0.731
Bo00835s060 Brassica oleracea Bo00835s060 I 0.730
Bra039763 Brassica rapa Bra039763 I 0.730
TCM_019192 Theobroma cacao TCM_019192 I 0.728
Eucgr.F02842 Eucalyptus grandis Eucgr.F02842 I 0.724
MTR_5g078950 Medicago truncatula MTR_5g078950 I 0.722
Cagra.0463s0006 Capsella grandiflora Cagra.0463s0006 I 0.722
POPTR_0005s14460 Populus trichocarpa POPTR_0005s14460 I 0.720
POPTR_0005s14470 Populus trichocarpa POPTR_0005s14470 I 0.720
PK17827.1 Cannabis sativa PK17827.1 I 0.719
POPTR_0005s14480 Populus trichocarpa POPTR_0005s14480 I 0.719
SapurV1A.0230s0260 Salix purpurea SapurV1A.0230s0260 I 0.717
PRUPE_ppa026640mg Prunus persica PRUPE_ppa026640mg I 0.716
MTR_5g079290 Medicago truncatula MTR_5g079290 I 0.715
Pm029440 Prunus mume Pm029440 I 0.715
VIT_14s0006g01290 Vitis vinifera VIT_14s0006g01290 I 0.712
Pm029442 Prunus mume Pm029442 I 0.712
Cagra.0463s0008 Capsella grandiflora Cagra.0463s0008 I 0.709
MTR_8g060940 Medicago truncatula MTR_8g060940 I 0.709
VIT_02s0033g00410 Vitis vinifera VIT_02s0033g00410 I 0.706
MTR_5g078860 Medicago truncatula MTR_5g078860 I 0.706
VIT_02s0033g00450 Vitis vinifera VIT_02s0033g00450 I 0.706
Cagra.0463s0007 Capsella grandiflora Cagra.0463s0007 I 0.705
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.705
MTR_5g079220 Medicago truncatula MTR_5g079220 I 0.705
Aquca_015_00088 Aquilegia coerulea Aquca_015_00088 I 0.705
chr1.CM0141.350.nd Lotus japonicus chr1.CM0141.350.nd I 0.704
MTR_5g078910 Medicago truncatula MTR_5g078910 I 0.701
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.700
MTR_0001s0360 Medicago truncatula MTR_0001s0360 I 0.696
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.694
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.694
Carubv10020888m.g Capsella rubella Carubv10020888m.g I 0.694
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.694
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.694
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.694
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.694
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.694
evm.TU.supercontig_2742.1 Carica papaya evm.TU.supercontig_2742.1 I 0.694
MDP0000655330 Malus domestica MDP0000655330 I 0.694
evm.TU.supercontig_116.38 Carica papaya evm.TU.supercontig_116.38 I 0.694
MDP0000723614 Malus domestica MDP0000723614 I 0.694
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.694
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.694
27763.m000042 Ricinus communis 27763.m000042 I 0.693
MTR_5g078930 Medicago truncatula MTR_5g078930 I 0.692
Eucgr.H04157 Eucalyptus grandis Eucgr.H04157 I 0.692
Eucgr.J01580 Eucalyptus grandis Eucgr.J01580 I 0.690
MTR_5g078800 Medicago truncatula MTR_5g078800 I 0.690
scaffold_201356.1 Arabidopsis lyrata scaffold_201356.1 I 0.688
mgf019317m Mimulus guttatus mgf019317m I 0.687
MTR_5g079120 Medicago truncatula MTR_5g079120 I 0.687
Eucgr.J01586 Eucalyptus grandis Eucgr.J01586 I 0.686
MDP0000791870 Malus domestica MDP0000791870 I 0.685
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.685
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.685
SapurV1A.0918s0130 Salix purpurea SapurV1A.0918s0130 I 0.685
POPTR_0001s04240 Populus trichocarpa POPTR_0001s04240 I 0.685
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.685
fgenesh1_pg.C_scaffold_2000950 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000950 I 0.685
GLYMA19G02980 Glycine max GLYMA19G02980 I 0.684
Ca_22078 Cicer arietinum Ca_22078 I 0.683
GLYMA09G36966 Glycine max GLYMA09G36966 I 0.683
VIT_02s0033g00390 Vitis vinifera VIT_02s0033g00390 I 0.682
Aquca_015_00085 Aquilegia coerulea Aquca_015_00085 I 0.681
Eucgr.J01553 Eucalyptus grandis Eucgr.J01553 I 0.680
Eucgr.J01569 Eucalyptus grandis Eucgr.J01569 I 0.680
GLYMA18G49690 Glycine max GLYMA18G49690 I 0.679
POPTR_0005s14490 Populus trichocarpa POPTR_0005s14490 I 0.679
gene31413-v1.0-hybrid Fragaria vesca gene31413-v1.0-hybrid I 0.679
PDK_20s1447601g001 Phoenix dactylifera PDK_20s1447601g001 I 0.678
SapurV1A.0230s0250 Salix purpurea SapurV1A.0230s0250 I 0.676
VIT_02s0033g00400 Vitis vinifera VIT_02s0033g00400 I 0.676
PRUPE_ppa016711mg Prunus persica PRUPE_ppa016711mg I 0.675
Lus10042522.g Linum usitatissimum Lus10042522.g I 0.675
Gorai.007G268800 Gossypium raimondii Gorai.007G268800 I 0.675
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.675
Aquca_015_00090 Aquilegia coerulea Aquca_015_00090 I 0.675
MTR_7g017260 Medicago truncatula MTR_7g017260 I 0.674
LjT20L14.140.nd Lotus japonicus LjT20L14.140.nd I 0.672
MDP0000192051 Malus domestica MDP0000192051 I 0.671
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.670
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.670
GLYMA13G09980 Glycine max GLYMA13G09980 I 0.670
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.670
GLYMA14G24500 Glycine max GLYMA14G24500 I 0.670
VIT_06s0004g00570 Vitis vinifera VIT_06s0004g00570 I 0.670
Eucgr.J01578 Eucalyptus grandis Eucgr.J01578 I 0.669
Eucgr.J01555 Eucalyptus grandis Eucgr.J01555 I 0.669
Eucgr.J01573 Eucalyptus grandis Eucgr.J01573 I 0.669
Eucgr.J01576 Eucalyptus grandis Eucgr.J01576 I 0.667
Gorai.013G118300 Gossypium raimondii Gorai.013G118300 I 0.665
TCM_026054 Theobroma cacao TCM_026054 I 0.665
GRMZM2G395672 Zea mays GRMZM2G395672 I 0.665
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.664
TCM_025910 Theobroma cacao TCM_025910 I 0.664
TCM_024180 Theobroma cacao TCM_024180 I 0.664
GLYMA09G36983 Glycine max GLYMA09G36983 I 0.664
POPTR_0019s05190 Populus trichocarpa POPTR_0019s05190 I 0.661
POPTR_0019s05200 Populus trichocarpa POPTR_0019s05200 I 0.661
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.661