GSMUA_Achr10G02290_001 (Musa acuminata)
Myb/SANT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00249 (Myb_DNA-binding) IPR014778 GSMUA_Achr10G02290_001 T272224_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK27693.1
M01285_2.00 		Cannabis sativa
NNYTATCBNN
NNVGATARNN		 PBM
Lambert et al.(2019)
pTH11302 		0.688 0.787
PK27213.1
M01284_2.00 		Cannabis sativa
NHWATCNNNN
NNNNGATWDN		 PBM
Lambert et al.(2019)
pTH10196 		0.673 0.777
PK27213.1
M02356_2.00 		Cannabis sativa
NHHATCNNNN
NNNNGATDDN		 PBM
Weirauch et al.(2014)
pTH9600 		0.673 0.777
For this family, TFs with SR scores > 0.661 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr10P02290_001 Myb 136 183

Links

Other Myb/SANT family TFs
Other Musa acuminata TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GSMUA_Achr10G22470_001 Musa acuminata GSMUA_Achr10G22470_001 N 0.751
GSMUA_Achr6G33620_001 Musa acuminata GSMUA_Achr6G33620_001 N 0.729
gene07984-v1.0-hybrid Fragaria vesca gene07984-v1.0-hybrid I 0.717
Cla018243 Citrullus lanatus Cla018243 I 0.712
Gorai.009G093700 Gossypium raimondii Gorai.009G093700 I 0.708
cassava23356.valid.m1 Manihot esculenta cassava23356.valid.m1 I 0.707
Lus10018209.g Linum usitatissimum Lus10018209.g I 0.702
evm.TU.supercontig_112.58 Carica papaya evm.TU.supercontig_112.58 I 0.701
29681.m001296 Ricinus communis 29681.m001296 I 0.701
28288.m000014 Ricinus communis 28288.m000014 I 0.701
VIT_06s0004g06100 Vitis vinifera VIT_06s0004g06100 I 0.700
Cla013553 Citrullus lanatus Cla013553 I 0.696
Cucsa.176140 Cucumis sativus Cucsa.176140 I 0.694
Ca_15603 Cicer arietinum Ca_15603 I 0.693
Aquca_009_00736 Aquilegia coerulea Aquca_009_00736 I 0.692
evm.TU.supercontig_1130.1 Carica papaya evm.TU.supercontig_1130.1 I 0.692
Lus10040696.g Linum usitatissimum Lus10040696.g I 0.691
PK27693.1 Cannabis sativa PK27693.1 D 0.688
GLYMA11G22960 Glycine max GLYMA11G22960 I 0.686
Cla004397 Citrullus lanatus Cla004397 I 0.686
GLYMA18G07250 Glycine max GLYMA18G07250 I 0.686
Cucsa.139090 Cucumis sativus Cucsa.139090 I 0.686
MTR_5g069710 Medicago truncatula MTR_5g069710 I 0.686
Aquca_004_00289 Aquilegia coerulea Aquca_004_00289 I 0.684
POPTR_0001s25590 Populus trichocarpa POPTR_0001s25590 I 0.684
Ca_19327 Cicer arietinum Ca_19327 I 0.681
MTR_3g462790 Medicago truncatula MTR_3g462790 I 0.681
MDP0000292581 Malus domestica MDP0000292581 I 0.680
MDP0000243328 Malus domestica MDP0000243328 I 0.680
MDP0000255630 Malus domestica MDP0000255630 I 0.680
TCM_041672 Theobroma cacao TCM_041672 I 0.678
GLYMA14G37050 Glycine max GLYMA14G37050 I 0.676
Ca_14247 Cicer arietinum Ca_14247 I 0.676
GLYMA02G39000 Glycine max GLYMA02G39000 I 0.676
Eucgr.J01940 Eucalyptus grandis Eucgr.J01940 I 0.675
gene18815-v1.0-hybrid Fragaria vesca gene18815-v1.0-hybrid I 0.675
orange1.1g021816m.g Citrus sinensis orange1.1g021816m.g I 0.674
Ciclev10028910m.g Citrus clementina Ciclev10028910m.g I 0.674
PK27213.1 Cannabis sativa PK27213.1 D 0.673
Bra002610 Brassica rapa Bra002610 I 0.672
SapurV1A.0778s0020 Salix purpurea SapurV1A.0778s0020 I 0.668
Gorai.002G261600 Gossypium raimondii Gorai.002G261600 I 0.668
GLYMA07G17660 Glycine max GLYMA07G17660 I 0.668
SapurV1A.3589s0010 Salix purpurea SapurV1A.3589s0010 I 0.668
POPTR_0016s11980 Populus trichocarpa POPTR_0016s11980 I 0.668
GLYMA18G42530 Glycine max GLYMA18G42530 I 0.668
cassava43688.valid.m1 Manihot esculenta cassava43688.valid.m1 I 0.668
SapurV1A.0001s0790 Salix purpurea SapurV1A.0001s0790 I 0.666
PRUPE_ppa009072mg Prunus persica PRUPE_ppa009072mg I 0.665
Gorai.006G180900 Gossypium raimondii Gorai.006G180900 I 0.664
BRADI2G23710 Brachypodium distachyon BRADI2G23710 N 0.664
GSMUA_Achr8G02380_001 Musa acuminata GSMUA_Achr8G02380_001 I 0.664
SapurV1A.0164s0380 Salix purpurea SapurV1A.0164s0380 I 0.663
SapurV1A.0041s0720 Salix purpurea SapurV1A.0041s0720 I 0.663
MTR_7g067080 Medicago truncatula MTR_7g067080 I 0.663
Gorai.012G112000 Gossypium raimondii Gorai.012G112000 I 0.663
Thhalv10014270m.g Eutrema salsugineum Thhalv10014270m.g I 0.662
cassava23290.valid.m1 Manihot esculenta cassava23290.valid.m1 I 0.662
Bo9g135730 Brassica oleracea Bo9g135730 I 0.662
PGSC0003DMG400030348 Solanum tuberosum PGSC0003DMG400030348 I 0.661
Solyc06g076770.2 Solanum lycopersicum Solyc06g076770.2 I 0.661