CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDP0000292581
(
Malus domestica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00249 (Myb_DNA-binding)
IPR014778
MDP0000292581
T288561_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK27213.1
M01284_2.00
Cannabis sativa
NHWATCNNNN
NNNNGATWDN
PBM
Lambert et al.(2019)
pTH10196
0.734
0.860
PK27213.1
M02356_2.00
Cannabis sativa
NHHATCNNNN
NNNNGATDDN
PBM
Weirauch et al.(2014)
pTH9600
0.734
0.860
PK27693.1
M01285_2.00
Cannabis sativa
NNYTATCBNN
NNVGATARNN
PBM
Lambert et al.(2019)
pTH11302
0.689
0.839
AT5G58900
M07146_2.00
Arabidopsis thaliana
HHWWYCTTATCYWHW
WDWRGATAAGRWWDD
Dap-seq
OMalley et al.(2016)
At5g58900_col_a
0.686
0.849
AT5G58900
M07147_2.00
Arabidopsis thaliana
HWYMTTATCHWNWWH
DWWNWDGATAAKRWD
Dap-seq
OMalley et al.(2016)
At5g58900_colamp_a
0.686
0.849
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDP0000292581
Myb
135
182
GVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKYF
Links
Other
Myb/SANT
family TFs
Other
Malus domestica
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000255630
Malus domestica
MDP0000255630
I
0.909
MDP0000243328
Malus domestica
MDP0000243328
I
0.909
VIT_06s0004g06100
Vitis vinifera
VIT_06s0004g06100
I
0.808
GLYMA18G07250
Glycine max
GLYMA18G07250
I
0.779
Gorai.009G093700
Gossypium raimondii
Gorai.009G093700
I
0.775
Ciclev10028910m.g
Citrus clementina
Ciclev10028910m.g
I
0.772
orange1.1g021816m.g
Citrus sinensis
orange1.1g021816m.g
I
0.772
Pm000529
Prunus mume
Pm000529
I
0.760
29681.m001296
Ricinus communis
29681.m001296
I
0.758
PRUPE_ppa009072mg
Prunus persica
PRUPE_ppa009072mg
I
0.751
TCM_041672
Theobroma cacao
TCM_041672
I
0.749
evm.TU.supercontig_112.58
Carica papaya
evm.TU.supercontig_112.58
I
0.747
GLYMA02G39000
Glycine max
GLYMA02G39000
I
0.746
Ca_14247
Cicer arietinum
Ca_14247
I
0.739
SapurV1A.0041s0720
Salix purpurea
SapurV1A.0041s0720
I
0.739
SapurV1A.0164s0380
Salix purpurea
SapurV1A.0164s0380
I
0.739
cassava23356.valid.m1
Manihot esculenta
cassava23356.valid.m1
I
0.739
GLYMA11G22960
Glycine max
GLYMA11G22960
I
0.735
gene07984-v1.0-hybrid
Fragaria vesca
gene07984-v1.0-hybrid
I
0.734
PK27213.1
Cannabis sativa
PK27213.1
D
0.734
Eucgr.J01940
Eucalyptus grandis
Eucgr.J01940
I
0.733
Cla013553
Citrullus lanatus
Cla013553
I
0.733
MTR_3g462790
Medicago truncatula
MTR_3g462790
I
0.732
GLYMA14G37050
Glycine max
GLYMA14G37050
I
0.729
Ca_15603
Cicer arietinum
Ca_15603
I
0.729
POPTR_0001s25590
Populus trichocarpa
POPTR_0001s25590
I
0.728
Cucsa.139090
Cucumis sativus
Cucsa.139090
I
0.722
MTR_5g069710
Medicago truncatula
MTR_5g069710
I
0.719
mgf022442m
Mimulus guttatus
mgf022442m
I
0.714
Bra002610
Brassica rapa
Bra002610
I
0.710
Thhalv10014270m.g
Eutrema salsugineum
Thhalv10014270m.g
I
0.710
Cla018243
Citrullus lanatus
Cla018243
I
0.708
Bo3g018460
Brassica oleracea
Bo3g018460
I
0.697
Bra006741
Brassica rapa
Bra006741
I
0.697
cassava23290.valid.m1
Manihot esculenta
cassava23290.valid.m1
I
0.695
Aquca_004_00289
Aquilegia coerulea
Aquca_004_00289
I
0.694
orange1.1g021756m.g
Citrus sinensis
orange1.1g021756m.g
I
0.693
Ciclev10012285m.g
Citrus clementina
Ciclev10012285m.g
I
0.693
POPTR_0009s04730
Populus trichocarpa
POPTR_0009s04730
I
0.690
PK27693.1
Cannabis sativa
PK27693.1
D
0.689
Cagra.0891s0087
Capsella grandiflora
Cagra.0891s0087
I
0.686
Carubv10026903m.g
Capsella rubella
Carubv10026903m.g
I
0.686
Bostr.26833s0356
Boechera stricta
Bostr.26833s0356
I
0.686
AT5G58900
Arabidopsis thaliana
AT5G58900
D
0.686
fgenesh2_kg.8__1829__AT5G58900.1
Arabidopsis lyrata
fgenesh2_kg.8__1829__AT5G58900.1
I
0.686
GLYMA03G14440
Glycine max
GLYMA03G14440
I
0.683
Solyc06g076770.2
Solanum lycopersicum
Solyc06g076770.2
I
0.683
PGSC0003DMG400030348
Solanum tuberosum
PGSC0003DMG400030348
I
0.683
GLYMA01G27720
Glycine max
GLYMA01G27720
I
0.683
Aquca_009_00736
Aquilegia coerulea
Aquca_009_00736
I
0.682
Cla013899
Citrullus lanatus
Cla013899
N
0.681
Cucsa.364590
Cucumis sativus
Cucsa.364590
N
0.680
GSMUA_Achr10G02290_001
Musa acuminata
GSMUA_Achr10G02290_001
I
0.680
GLYMA18G42530
Glycine max
GLYMA18G42530
I
0.679
evm.TU.supercontig_1130.1
Carica papaya
evm.TU.supercontig_1130.1
I
0.679
GLYMA07G17660
Glycine max
GLYMA07G17660
I
0.679
MTR_7g067080
Medicago truncatula
MTR_7g067080
I
0.676
Pavir.J16113
Panicum virgatum
Pavir.J16113
I
0.675
GSMUA_Achr6G33620_001
Musa acuminata
GSMUA_Achr6G33620_001
N
0.674
Cucsa.164580
Cucumis sativus
Cucsa.164580
I
0.673
Bo9g135730
Brassica oleracea
Bo9g135730
I
0.670
TCM_042604
Theobroma cacao
TCM_042604
I
0.670
Solyc10g076820.1
Solanum lycopersicum
Solyc10g076820.1
I
0.669
PGSC0003DMG400019129
Solanum tuberosum
PGSC0003DMG400019129
I
0.669
Lus10040696.g
Linum usitatissimum
Lus10040696.g
I
0.669
Lus10018209.g
Linum usitatissimum
Lus10018209.g
I
0.669
Lus10035518.g
Linum usitatissimum
Lus10035518.g
I
0.668
Gorai.002G261600
Gossypium raimondii
Gorai.002G261600
I
0.663
cassava43688.valid.m1
Manihot esculenta
cassava43688.valid.m1
I
0.663
TCM_021750
Theobroma cacao
TCM_021750
I
0.663
MDP0000142580
Malus domestica
MDP0000142580
I
0.663
MDP0000221993
Malus domestica
MDP0000221993
I
0.663
SapurV1A.0036s0350
Salix purpurea
SapurV1A.0036s0350
I
0.663