CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_011153
(
Oryza longistaminata
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
OLONG_011153
T275928_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_011153-R1
Myb
11
57
KGSWRAEEDALLTRLVAQHGPHRWSIISGAIPGRSGKSCRLRWCTQR
OLONG_011153-R1
Myb
63
108
HRPFTPQEDALLAAAHARHGNKWATIARLLPGRTDNSVKNHWNSNL
Links
Other
Myb/SANT
family TFs
Other
Oryza longistaminata
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA01G0396300
Oryza glaberrima
ORGLA01G0396300
N
0.886
ORUFI01G49370
Oryza rufipogon
ORUFI01G49370
N
0.886
OS01G0977300
Oryza sativa
OS01G0977300
N
0.886
BGIOSGA000003
Oryza indica
BGIOSGA000003
N
0.886
OGLUM01G50230
Oryza glumaepatula
OGLUM01G50230
N
0.886
ONIVA01G52120
Oryza nivara
ONIVA01G52120
N
0.886
OBART01G45880
Oryza barthii
OBART01G45880
N
0.886
OPUNC01G44800
Oryza punctata
OPUNC01G44800
N
0.882
OB01G55080
Oryza brachyantha
OB01G55080
N
0.854
GRMZM2G369799
Zea mays
GRMZM2G369799
I
0.839
Pavir.Ca02945
Panicum virgatum
Pavir.Ca02945
I
0.839
Pavir.Cb00156
Panicum virgatum
Pavir.Cb00156
I
0.839
Sb0088s002210
Sorghum bicolor
Sb0088s002210
N
0.803
Si022959m.g
Setaria italica
Si022959m.g
I
0.766
Traes_4DL_D41CB81EA
Triticum aestivum
Traes_4DL_D41CB81EA
I
0.749
Traes_4BL_545A5716E
Triticum aestivum
Traes_4BL_545A5716E
I
0.749
Traes_4AS_A79A68739
Triticum aestivum
Traes_4AS_A79A68739
N
0.749
LPERR01G40230
Leersia perrieri
LPERR01G40230
I
0.724
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.697
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.697
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.686
TCM_042474
Theobroma cacao
TCM_042474
I
0.679
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.678
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.678
29814.m000736
Ricinus communis
29814.m000736
I
0.678
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.678
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.677
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.664
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.661