CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA000003
(
Oryza indica
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
BGIOSGA000003
T266710_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA000003-PA
Myb
10
56
KGSWRAEEDALLTRLVAQHGPHRWSIISGAIPGRSGKSCRLRWCNQL
BGIOSGA000003-PA
Myb
62
107
HRPFTPQEDALLAAAHARHGNKWATIARLLPGRTDNSVKNHWNSNL
Links
Other
Myb/SANT
family TFs
Other
Oryza indica
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA01G52120
Oryza nivara
ONIVA01G52120
N
0.909
ORGLA01G0396300
Oryza glaberrima
ORGLA01G0396300
N
0.909
ORUFI01G49370
Oryza rufipogon
ORUFI01G49370
N
0.909
OGLUM01G50230
Oryza glumaepatula
OGLUM01G50230
N
0.909
OS01G0977300
Oryza sativa
OS01G0977300
N
0.909
OBART01G45880
Oryza barthii
OBART01G45880
N
0.909
OPUNC01G44800
Oryza punctata
OPUNC01G44800
N
0.905
OLONG_011153
Oryza longistaminata
OLONG_011153
N
0.886
OB01G55080
Oryza brachyantha
OB01G55080
N
0.877
Pavir.Cb00156
Panicum virgatum
Pavir.Cb00156
I
0.862
Pavir.Ca02945
Panicum virgatum
Pavir.Ca02945
I
0.862
GRMZM2G369799
Zea mays
GRMZM2G369799
I
0.862
Sb0088s002210
Sorghum bicolor
Sb0088s002210
N
0.826
Si022959m.g
Setaria italica
Si022959m.g
I
0.789
Traes_4AS_A79A68739
Triticum aestivum
Traes_4AS_A79A68739
N
0.772
Traes_4DL_D41CB81EA
Triticum aestivum
Traes_4DL_D41CB81EA
I
0.772
Traes_4BL_545A5716E
Triticum aestivum
Traes_4BL_545A5716E
I
0.772
LPERR01G40230
Leersia perrieri
LPERR01G40230
I
0.747
Lus10028979.g
Linum usitatissimum
Lus10028979.g
I
0.720
Lus10040940.g
Linum usitatissimum
Lus10040940.g
I
0.720
Cucsa.368410
Cucumis sativus
Cucsa.368410
I
0.710
TCM_042474
Theobroma cacao
TCM_042474
I
0.702
cassava41257.m1
Manihot esculenta
cassava41257.m1
I
0.701
SapurV1A.0650s0070
Salix purpurea
SapurV1A.0650s0070
I
0.701
29814.m000736
Ricinus communis
29814.m000736
I
0.701
POPTR_0008s07100
Populus trichocarpa
POPTR_0008s07100
I
0.701
POPTR_0014s03440
Populus trichocarpa
POPTR_0014s03440
I
0.700
Lus10007503.g
Linum usitatissimum
Lus10007503.g
I
0.687
Gorai.012G078200
Gossypium raimondii
Gorai.012G078200
I
0.684
Ciclev10032317m.g
Citrus clementina
Ciclev10032317m.g
I
0.683
GLYMA04G03910
Glycine max
GLYMA04G03910
I
0.683
orange1.1g046570m.g
Citrus sinensis
orange1.1g046570m.g
I
0.683
Cla004431
Citrullus lanatus
Cla004431
I
0.683
MDP0000298689
Malus domestica
MDP0000298689
I
0.681
chr2.CM0002.110.nc
Lotus japonicus
chr2.CM0002.110.nc
I
0.678
Aquca_045_00169
Aquilegia coerulea
Aquca_045_00169
I
0.674
Cla020946
Citrullus lanatus
Cla020946
I
0.672
gene21001-v1.0-hybrid
Fragaria vesca
gene21001-v1.0-hybrid
I
0.671
mgf020432m
Mimulus guttatus
mgf020432m
I
0.670
orange1.1g025351m.g
Citrus sinensis
orange1.1g025351m.g
I
0.670
SapurV1A.0017s0390
Salix purpurea
SapurV1A.0017s0390
I
0.670
Ca_01522
Cicer arietinum
Ca_01522
I
0.670
Ciclev10002239m.g
Citrus clementina
Ciclev10002239m.g
I
0.670
evm.TU.supercontig_376.4
Carica papaya
evm.TU.supercontig_376.4
I
0.670
30170.m013927
Ricinus communis
30170.m013927
I
0.670
TCM_007138
Theobroma cacao
TCM_007138
I
0.667
PRUPE_ppa017892mg
Prunus persica
PRUPE_ppa017892mg
I
0.667
Pavir.J33236
Panicum virgatum
Pavir.J33236
I
0.665
Cucsa.123440
Cucumis sativus
Cucsa.123440
I
0.665
Cla021015
Citrullus lanatus
Cla021015
I
0.665
mgf023922m
Mimulus guttatus
mgf023922m
I
0.665
PK01153.1
Cannabis sativa
PK01153.1
I
0.663
VIT_13s0067g01360
Vitis vinifera
VIT_13s0067g01360
I
0.662
Lus10010055.g
Linum usitatissimum
Lus10010055.g
I
0.661
cassava16103.m1
Manihot esculenta
cassava16103.m1
I
0.661
Lus10010238.g
Linum usitatissimum
Lus10010238.g
I
0.661